DY305927

Overview
NameDY305927
Unique NameDY305927
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1250
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305927 vs. ExPASy Swiss-Prot
Match: SCMC2_XENTR (Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Xenopus tropicalis GN=slc25a25 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 7.176e-16
Identity = 63/226 (27.88%), Postives = 106/226 (46.90%), Query Frame = 3
Query:    3 TKAVLAPLETIRTRMVVGVGSKN---ISGNFIEVIEQQGWQGLWAGNGINMLRIIPTQAIELGTFECVKRAMTTAQEKWSQEECPKVQIGPLSLSFSLSWISPXXXXXXXXXXXSTLACHPLEVLKDRLTV-SHDVYPSLSIAISKIYKEGGIGAFYAGISPTLIGMLPYSTCYYFMYETLKKKYCNSKNKRSLNRP--EMLALGALAGFTASTISFPLEVARKRL 662
            ++   APL+ ++  M V     N   + G F ++I + G + LW GNGIN+++I P  AI+   +E +KR + + QE     E  ++  G L+   + S I                  +P+EVLK R+ +     Y  +     KI  + G+ AFY G  P ++G++PY+     +YETLK  +       S +     +LA G ++       S+PL + R R+
Sbjct:  244 SRTCTAPLDRLKVLMQVHASRSNNMSMLGGFTQMIREGGIRSLWRGNGINVIKIAPESAIKFMAYEQMKRIIGSDQETLGIHE--RLVAGSLAGVIAQSSI------------------YPMEVLKTRMALRKTGQYQGMLDCGKKILLKEGVSAFYKGYVPNMLGIIPYAGIDLAVYETLKNAWLQRYATSSADPGVFVLLACGTISSTCGQLASYPLALVRTRM 449          
BLAST of DY305927 vs. ExPASy Swiss-Prot
Match: SCM2A_DANRE (Calcium-binding mitochondrial carrier protein SCaMC-2-A OS=Danio rerio GN=slc25a25a PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.224e-15
Identity = 63/226 (27.88%), Postives = 107/226 (47.35%), Query Frame = 3
Query:    3 TKAVLAPLETIRTRMVV-GVGSKN--ISGNFIEVIEQQGWQGLWAGNGINMLRIIPTQAIELGTFECVKRAMTTAQEKWSQEECPKVQIGPLSLSFSLSWISPXXXXXXXXXXXSTLACHPLEVLKDRLTV-SHDVYPSLSIAISKIYKEGGIGAFYAGISPTLIGMLPYSTCYYFMYETLKKKYCNSKNKRSLNRP--EMLALGALAGFTASTISFPLEVARKRL 662
            ++   APL+ ++  M V G   K+  +     ++I++ G + LW GNGIN+++I P  A++   +E +KR M ++QE     E  +   G L+   + S I                  +P+EVLK RL +     Y  +S     I K  G+ AFY G  P ++G++PY+     +YETLK  +       + +     +LA G ++       S+PL + R R+
Sbjct:  200 SRTCTAPLDRLKVLMQVHGCQGKSMCLMSGLTQMIKEGGVRSLWRGNGINVIKIAPETALKFMAYEQIKRVMGSSQETLGISE--RFVAGSLAGVIAQSTI------------------YPMEVLKTRLALRKTGQYKGISDCAKHILKTEGMSAFYKGYVPNMLGIIPYAGIDLAVYETLKNTWLQRYGTENADPGVFVLLACGTVSSTCGQLASYPLALIRTRM 405          
BLAST of DY305927 vs. ExPASy Swiss-Prot
Match: SCM1A_XENLA (Calcium-binding mitochondrial carrier protein SCaMC-1-A OS=Xenopus laevis GN=slc25a24-A PE=2 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 1.224e-15
Identity = 64/221 (28.96%), Postives = 107/221 (48.42%), Query Frame = 3
Query:   18 APLETIRTRMVVG--VGSKNISGNFIEVIEQQGWQGLWAGNGINMLRIIPTQAIELGTFECVKRAMTTAQEKWSQEECPKVQIGPLSLSFSLSWISPXXXXXXXXXXXSTLACHPLEVLKDRLTVSHD-VYPSLSIAISKIYKEGGIGAFYAGISPTLIGMLPYSTCYYFMYETLKKKYCNSKNKRSLNRPEMLAL---GALAGFTASTISFPLEVARKRL 662
            APL+ ++  M V    G+ NI     +++++ G + LW GNG+N+++I P  A++   +E  K+  T+   K    E  +   G L+ + + + I                  +P+EVLK RL V     Y  +     KI ++ GI AFY G  P ++G++PY+     +YETLK  +  +  K S N P +L L   G ++       S+PL + R R+
Sbjct:  213 APLDRLKVMMQVHGTKGNSNIITGLKQMVKEGGVRSLWRGNGVNVIKIAPETAMKFWAYEQYKKLFTSESGKLGTAE--RFIAGSLAGATAQTSI------------------YPMEVLKTRLAVGKTGQYSGMFDCAKKIMQKEGILAFYKGYIPNILGIIPYAGIDLAIYETLKNYWLQNYAKDSAN-PGVLVLLGCGTVSSTCGQLASYPLALIRTRM 412          
BLAST of DY305927 vs. ExPASy Swiss-Prot
Match: SCMC3_HUMAN (Calcium-binding mitochondrial carrier protein SCaMC-3 OS=Homo sapiens GN=SLC25A23 PE=1 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 2.088e-15
Identity = 65/221 (29.41%), Postives = 104/221 (47.06%), Query Frame = 3
Query:   18 APLETIRTRMVVGVGSKN---ISGNFIEVIEQQGWQGLWAGNGINMLRIIPTQAIELGTFECVKRAMTTAQEKWSQEECPKVQIGPLSLSFSLSWISPXXXXXXXXXXXSTLACHPLEVLKDRLTVSH-DVYPSLSIAISKIYKEGGIGAFYAGISPTLIGMLPYSTCYYFMYETLKKKYCNSKNKRSLNRP--EMLALGALAGFTASTISFPLEVARKRL 662
            APL+ ++  M V     N   I G    ++ + G + LW GNGIN+L+I P  AI+   +E +KRA+   QE    +E  +   G L+ + + + I                  +P+EVLK RLT+     Y  L     +I +  G  AFY G  P ++G++PY+     +YETLK  +    +  S +     +LA G ++       S+PL + R R+
Sbjct:  204 APLDRLKVFMQVHASKTNRLNILGGLRSMVLEGGIRSLWRGNGINVLKIAPESAIKFMAYEQIKRAILGQQETLHVQE--RFVAGSLAGATAQTII------------------YPMEVLKTRLTLRRTGQYKGLLDCARRILEREGPRAFYRGYLPNVLGIIPYAGIDLAVYETLKNWWLQQYSHDSADPGILVLLACGTISSTCGQIASYPLALVRTRM 404          
BLAST of DY305927 vs. ExPASy Swiss-Prot
Match: SCMC1_DANRE (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Danio rerio GN=slc25a24 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 2.727e-15
Identity = 62/222 (27.93%), Postives = 109/222 (49.10%), Query Frame = 3
Query:   18 APLETIRTRMVVGVGSKN---ISGNFIEVIEQQGWQGLWAGNGINMLRIIPTQAIELGTFECVKRAMTTAQEKWSQEECPKVQIGPLSLSFSLSWISPXXXXXXXXXXXSTLACHPLEVLKDRLTVSHD-VYPSLSIAISKIYKEGGIGAFYAGISPTLIGMLPYSTCYYFMYETLKKKYCNSKNKRSLNRPEMLAL---GALAGFTASTISFPLEVARKRL 662
            APL+ ++  M V     N   +   F ++I++ G   LW GNG+N+++I P  AI+   +E  K+ ++        ++  KVQ     ++ SL+  +            +  A +P+EV+K RLT+     Y  +     KI ++ G+ AFY G  P ++G++PY+     +YETLK  + +   K + N P +L L   G ++       S+PL + R R+
Sbjct:  214 APLDRMKVFMQVHSSKTNKISLVNGFKQMIKEGGVASLWRGNGVNVIKIAPETAIKFMAYEQYKKLLS--------KDGGKVQSHERFMAGSLAGAT------------AQTAIYPMEVMKTRLTLRKTGQYSGMFDCAKKILRKEGVKAFYKGYVPNILGIIPYAGIDLAVYETLKNTWLSHYAKDTAN-PGVLVLLGCGTISSTCGQLASYPLALIRTRM 414          
BLAST of DY305927 vs. ExPASy Swiss-Prot
Match: GDC_RAT (Graves disease carrier protein (Fragment) OS=Rattus norvegicus GN=Slc25a16 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 3.562e-15
Identity = 62/209 (29.67%), Postives = 101/209 (48.33%), Query Frame = 3
Query:   93 VIEQQGWQGLWAGNGINMLRIIPTQAIELGTFECVKRAMTTAQEKWSQEECPKVQIGPLSLSFSLSWISPXXXXXXXXXXXSTLACHPLEVLKDRLTVS---HDVYPSLSIAISKIY-KEGGIGAFYAGISPTLIGMLPYSTCYYFMYETLKK---KYCNS-KNKRSLNRPEMLAL--------GALAGFTASTISFPLEVARKRLMVG 671
            V +++G+ GL+ GNG  M+RI P  AI+   FE  K  +TT  +        ++  G ++   S++               + +  +PL+V++ RL         Y  +  A   IY KEGG   FY G+ PT++GM PY++  +F + TLK     Y  +   + S + P +L L        G +A   A TIS+P +V R+R+ +G
Sbjct:   83 VPQKEGYLGLYKGNGAMMIRIFPYGAIQFMAFEHYKTFITT--KLGVSGHVHRLMAGSMAGKMSMT---------------AVICTYPLDVVRVRLAFQVKGEHTYSGIIHAFKTIYAKEGGFLGFYRGLMPTILGMAPYASVSFFTFGTLKSVGLSYAPTLLGRPSSDNPNVLVLKTHINLLCGGVARAIAQTISYPFDVTRRRMQLG 274          
BLAST of DY305927 vs. ExPASy Swiss-Prot
Match: SCMC1_XENTR (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Xenopus tropicalis GN=slc25a24 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 7.934e-15
Identity = 62/222 (27.93%), Postives = 104/222 (46.85%), Query Frame = 3
Query:   18 APLETIRTRMVV--GVGSKNISGNFIEVIEQQGWQGLWAGNGINMLRIIPTQAIELGTFECVKRAMTTAQEKWSQEECPKVQIGPLSLSFSLSWISPXXXXXXXXXXXSTLACHPLEVLKDRLTVSH-DVYPSLSIAISKIYKEGGIGAFYAGISPTLIGMLPYSTCYYFMYETLKKKYCNSKNKRSLNRPEMLALGALAGFTAST----ISFPLEVARKRL 662
            APL+ ++  M V    G+ NI     +++++ G + LW GNG+N+++I P  A++   +E  K+  T+   K    E  +   G L+                     +  + +P+EVLK RL V     Y  +     KI +  G+ AFY G  P ++G++PY+     +YETLK  +  +    S N   ++ LG   G  +ST     S+PL + R R+
Sbjct:  213 APLDRLKVMMQVHGSKGNANIITGLKQMVKEGGIRSLWRGNGVNVIKIAPETAMKFWAYEQYKKLFTSESGKLGTAE--RFIAGSLA------------------GATAQTSIYPMEVLKTRLAVGKTGQYSGMFDCAKKIMQREGVRAFYKGYIPNILGIIPYAGIDLAIYETLKTFWLQNYATDSANPGVLVLLG--CGTASSTCGQLASYPLALIRTRM 412          
BLAST of DY305927 vs. ExPASy Swiss-Prot
Match: GDC_MOUSE (Graves disease carrier protein homolog OS=Mus musculus GN=Slc25a16 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 7.934e-15
Identity = 67/243 (27.57%), Postives = 113/243 (46.50%), Query Frame = 3
Query:    6 KAVLAPLETIRTRMVVGVGSKN-----ISGNFIEVIEQQGWQGLWAGNGINMLRIIPTQAIELGTFECVKRAMTTAQEKWSQEECPKVQIGPLSLSFSLSWISPXXXXXXXXXXXSTLACHPLEVLKDRLTVS---HDVYPSLSIAISKIY-KEGGIGAFYAGISPTLIGMLPYSTCYYFMYETLKK---KYCNS-KNKRSLNRPEMLAL--------GALAGFTASTISFPLEVARKRLMVG 671
            K  +APL+  R ++++   +++     +      V +++G+ GL+ GNG  M+RI P  AI+   FE  K  +TT  +        ++  G ++                     + +  +PL+V++ RL         Y  +  A   IY KEGG   FY G+ PT++GM PY+   +F + TLK     Y  +   + S + P +L L        G +AG  A TIS+P +V R+R+ +G
Sbjct:   51 KTTVAPLD--RVKVLLQAHNRHYKHLGVLSTLRAVPQKEGYLGLYKGNGAMMIRIFPYGAIQFMAFEHYKTFITT--KLGVSGHVHRLMAGSMA------------------GMTAVICTYPLDVVRVRLAFQVKGEHTYSGIIHAFKTIYAKEGGFLGFYRGLMPTILGMAPYAGVSFFTFGTLKSVGLSYAPALLGRPSSDNPNVLVLKTHINLLCGGVAGAIAQTISYPFDVTRRRMQLG 271          
BLAST of DY305927 vs. ExPASy Swiss-Prot
Match: GDC_BOVIN (Graves disease carrier protein OS=Bos taurus GN=SLC25A16 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.353e-14
Identity = 67/241 (27.80%), Postives = 109/241 (45.23%), Query Frame = 3
Query:    6 KAVLAPLETIRTRMVVGVGSKNISGNFIE---VIEQQGWQGLWAGNGINMLRIIPTQAIELGTFECVKRAMTTAQEKWSQEECPKVQIGPLSLSFSLSWISPXXXXXXXXXXXSTLACHPLEVLKDRLTVS---HDVYPSLSIAISKIY-KEGGIGAFYAGISPTLIGMLPYSTCYYFMYETLKK---KYCNS-KNKRSLNRPEMLAL--------GALAGFTASTISFPLEVARKRLMVG 671
            K  +APL+ ++  +          G F     V +++G+ GL+ GNG  M+RI P  AI+   FE  K  +TT  +        ++  G ++                     + +  +PL++++ RL         Y  +  A   IY KEGG   FY G+ PT++GM PY+   +F + TLK     Y  +   + S + P +L L        G +AG  A TIS+P +V R+R+ +G
Sbjct:   49 KTTVAPLDRVKVLLQAHNHHYRHLGVFSTLRAVPKKEGYLGLYKGNGAMMIRIFPYGAIQFMAFEHYKTLITT--KLGVSGHVHRLMAGSMA------------------GMTAVICTYPLDMVRVRLAFQVKGEHTYTGIIHAFKTIYAKEGGFLGFYRGLMPTILGMAPYAGVSFFTFGTLKSVGLSYAPTLLGRPSSDNPNVLVLKTHINLLCGGVAGAIAQTISYPFDVTRRRMQLG 269          
BLAST of DY305927 vs. ExPASy Swiss-Prot
Match: GDC_HUMAN (Graves disease carrier protein OS=Homo sapiens GN=SLC25A16 PE=2 SV=3)

HSP 1 Score: 80.8777 bits (198), Expect = 1.768e-14
Identity = 66/241 (27.39%), Postives = 104/241 (43.15%), Query Frame = 3
Query:    6 KAVLAPLETIRTRMVVGVGSKNISGNFIE---VIEQQGWQGLWAGNGINMLRIIPTQAIELGTFECVKRAMTTAQEKWSQEECPKVQIGPLSLSFSLSWISPXXXXXXXXXXXSTLACHPLEVLKDRLTVS---HDVYPSLSIAISKIY-KEGGIGAFYAGISPTLIGMLPYSTCYYFMYETLKKKYCNSK----NKRSLNRPEMLAL--------GALAGFTASTISFPLEVARKRLMVG 671
            K  +APL+ ++  +          G F     V +++G+ GL+ GNG  M+RI P  AI+   FE  K  +TT                       +S               + +  +PL++++ RL         Y  +  A   IY KEGG   FY G+ PT++GM PY+   +F + TLK    +       + S + P +L L        G +AG  A TIS+P +V R+R+ +G
Sbjct:   51 KTTVAPLDRVKVLLQAHNHHYKHLGVFSALRAVPQKEGFLGLYKGNGAMMIRIFPYGAIQFMAFEHYKTLITT--------------------KLGISGHVHRLMAGSMAGMTAVICTYPLDMVRVRLAFQVKGEHSYTGIIHAFKTIYAKEGGFFGFYRGLMPTILGMAPYAGVSFFTFGTLKSVGLSHAPTLLGRPSSDNPNVLVLKTHVNLLCGGVAGAIAQTISYPFDVTRRRMQLG 271          
The following BLAST results are available for this feature:
BLAST of DY305927 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
SCMC2_XENTR7.176e-1627.88Calcium-binding mitochondrial carrier protein SCaM... [more]
SCM2A_DANRE1.224e-1527.88Calcium-binding mitochondrial carrier protein SCaM... [more]
SCM1A_XENLA1.224e-1528.96Calcium-binding mitochondrial carrier protein SCaM... [more]
SCMC3_HUMAN2.088e-1529.41Calcium-binding mitochondrial carrier protein SCaM... [more]
SCMC1_DANRE2.727e-1527.93Calcium-binding mitochondrial carrier protein SCaM... [more]
GDC_RAT3.562e-1529.67Graves disease carrier protein (Fragment) OS=Rattu... [more]
SCMC1_XENTR7.934e-1527.93Calcium-binding mitochondrial carrier protein SCaM... [more]
GDC_MOUSE7.934e-1527.57Graves disease carrier protein homolog OS=Mus musc... [more]
GDC_BOVIN1.353e-1427.80Graves disease carrier protein OS=Bos taurus GN=SL... [more]
GDC_HUMAN1.768e-1427.39Graves disease carrier protein OS=Homo sapiens GN=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM2DF08RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305927 ID=DY305927; Name=DY305927; organism=Citrus sinensis; type=EST; length=1250bp
GGACTAAAGCTGTTCTTGCTCCTCTTGAGACCATCAGGACGAGAATGGTG
GTTGGTGTTGGATCCAAAAATATTTCTGGTAATTTCATTGAAGTAATTGA
GCAGCAGGGTTGGCAAGGACTATGGGCTGGCAATGGAATTAATATGCTCC
GAATAATCCCCACCCAGGCAATTGAGCTTGGAACATTTGAGTGTGTCAAA
CGAGCTATGACTACGGCACAAGAGAAATGGAGTCAGGAGGAATGCCCAAA
AGTGCAAATTGGTCCTCTCAGTTTGAGTTTTTCTCTCTCCTGGATTTCTC
CTGTTGCCGTGGCTGGTGCAGCTGCTGGAGTTGTTAGCACGCTTGCGTGC
CATCCTCTTGAAGTATTGAAGGATCGGTTGACTGTAAGTCATGATGTGTA
CCCTAGTTTGAGCATTGCAATTAGCAAAATATATAAGGAGGGTGGAATTG
GTGCTTTTTATGCCGGTATTTCACCTACGTTGATTGGCATGCTCCCGTAT
AGTACTTGTTACTACTTTATGTATGAGACATTGAAAAAGAAATACTGCAA
TTCAAAGAATAAGAGGTCGCTAAACCGTCCGGAGATGCTTGCATTGGGAG
CTCTTGCAGGTTTTACAGCTAGCACCATCAGCTTTCCCTTGGAGGTTGCT
AGGAAACGGCTTATGGTAGGACCTTTGCAGGGTAAATGTCCACCCCACAT
GGCAGCGGCACTTGCTGAAATCATTCTGGAAGAGGGTTTGATGGGCCTTT
ACCAGAATTGGGTGCAAGCTGTTTAAGGGTCATCCTTTCCTCAGAAAATC
CTGGAATGTTTACAAACCTTGAAAGAAATTACTGCCTCCCCTAAACCCTC
GTCCTATTTAAAACAAAAATTAGGTAATTTTCCTAATACCTATTGGGCAA
GTTTCTTGTATAAAGCCCCGCCTTTTACCATATAAAAAATGTGTTTCTTG
TATTAAAATTGAGGCAAGATTTTATTATTAGGTATTTTGTGTGCGCCCCG
ATTTTTTGTCTCCCGCCGTGCCTCTGGCGTGAGGTAGAATTTTCGTTATG
TTTCCGTATTTGATAGTAGCACTAATATAAGATGTGCCGGTGCTGCCAGG
GATGTTCCTCTCTCTATAGGTTCCGAAATAAGGAGAGTAAAAACTAGATA
GANCACAAAGGATACAACGTGTATTTAGAAAGTTGAAGTTGATGTGAATA
TTAGAATGCGTCTTGTTGGTTAATGTANATGGAATATATATTNTGAATAT
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