DY305927

Overview
NameDY305927
Unique NameDY305927
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1250
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305927 vs. ExPASy Swiss-Prot
Match: YBT5_SCHPO (Uncharacterized mitochondrial carrier C12D12.05c OS=Schizosaccharomyces pombe GN=SPBC12D12.05c PE=2 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 5.143e-14
Identity = 63/242 (26.03%), Postives = 108/242 (44.63%), Query Frame = 3
Query:    3 TKAVLAPLETIRTRMVVGVGSK--------NISGNFIEVIEQQGWQGLWAGNGINMLRIIPTQAIELGTFECVKRAMTTAQEKWSQEECPKVQIGPLSLSFSLSWISPXXXXXXXXXXXSTLACHPLEVLKDRLTVS------HDVYPSLSIAISKIYKEGGIGAFYAGISPTLIGMLPYSTCYYFMYETLKKKYCNSKNKRSLNRPE--------MLALGALAGFTASTISFPLEVARKRL 662
            ++   APL+ ++  ++   GSK         +      +  + G +  + GNGIN+L+++P  +I+ GT+E +KR +  +    +         G ++ S +  +I                  +P++ LK R+  S      H     LS A  ++YK  GI  +Y G+   ++GM PYS      +E LK+ +      R    P+        ++A GAL+G T +TI FPL V R RL
Sbjct:  141 SRTCTAPLDRLKVMLISDTGSKPSPKYPFATLLHTTKVLWNRNGIRSFFVGNGINVLKVMPESSIKFGTYEAMKRVLGISSSSENHSPLYSYLAGGMAGSVAQMFI------------------YPVDTLKFRIQCSDLSRGQHGKSIILSNA-KELYKSVGIRGYYRGVLVGILGMFPYSATDLGTFEGLKRTWIGILASRDNVDPQDVKLPNGLVMAFGALSGSTGATIVFPLNVIRTRL 363          
BLAST of DY305927 vs. ExPASy Swiss-Prot
Match: MCFB_DICDI (Mitochondrial substrate carrier family protein B OS=Dictyostelium discoideum GN=mcfB PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 5.143e-14
Identity = 51/196 (26.02%), Postives = 94/196 (47.96%), Query Frame = 3
Query:  105 QGWQGLWAGNGINMLRIIPTQAIELGTFECVKRAMTTAQEKWSQEECPKVQIGPLSLSFSLSWISPXXXXXXXXXXXSTLACHPLEVLKDRLTVS--HDVYPSLSIAISKIYKEGGIGAFYAGISPTLIGMLPYSTCYYFMYETLKKKYCNSKNKRSLNRPEMLALGALAGFTASTISFPLEVARKRLMVGPLQGK 686
            +G+ G + GNG N++RI P  AI+  ++E  K  +    ++        + +G  +   SL                  L  +PL++++ RLTV    + Y  ++     I +E G+   Y G+  + +G+ PY    +  YE LKK +       ++   + L  GA++G TA T+++P+++ R+RL V  + GK
Sbjct:  196 EGFIGFFKGNGTNVIRIAPYSAIQFLSYEKYKNFLLNNNDQTHLTTYENLFVGGAAGVTSL------------------LCTYPLDLIRSRLTVQVFGNKYNGIADTCKMIIREEGVAGLYKGLFASALGVAPYVAINFTTYENLKKTFIPKDTTPTV--VQSLTFGAISGATAQTLTYPIDLIRRRLQVQGIGGK 371          
BLAST of DY305927 vs. ExPASy Swiss-Prot
Match: TPC_BOVIN (Mitochondrial thiamine pyrophosphate carrier OS=Bos taurus GN=SLC25A19 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.496e-13
Identity = 60/238 (25.21%), Postives = 115/238 (48.32%), Query Frame = 3
Query:    3 TKAVLAPLETIRTRMVVGV-----GSKNISGNFI-----EVIEQQGWQGLWAGNGINMLRIIPTQAIELGTFECVKRAMTTAQEKWSQEECPKVQIGPLSLSFSLSWISPXXXXXXXXXXXSTLACHPLEVLKDRLTVSHD--VYPSLSIAISKIYKEGGIGAFYAGISPTLIGMLPYSTCYYFMYETLKKKY---CNSKNKRSLNRPEMLALGALAGFTASTISFPLEVARKRLMVG 671
            T+ +++PL+ I+ R  + +        N   + I     ++++++G    W G+    L  I   A++  +FE +   +  A  + +++       G LS   +                  TLA HP++VL+ R     +  VY +L  A+  +Y+  G   FY G++PTLI + PY+   + +Y +LK+ Y     ++ K++ N   +L  G+ AG  + T+++PL++ +KRL VG
Sbjct:   29 TRVLISPLDVIKIRFQLQIERLSRSDPNAKYHGILQAGRQILQEEGPTAFWKGHIPAQLLSIGYGAVQFLSFEALTELVHRASVRDARDFSVHFLCGGLSACVA------------------TLAVHPVDVLRTRFAAQGEPRVYKTLRDAVVTMYRTEGPLVFYKGLNPTLIAIFPYAGFQFSIYSSLKRAYEWALPAEGKKNGNFKNLLC-GSGAGVISKTLTYPLDLFKKRLQVG 247          
BLAST of DY305927 vs. ExPASy Swiss-Prot
Match: S2541_BOVIN (Solute carrier family 25 member 41 OS=Bos taurus GN=SLC25A41 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.496e-13
Identity = 69/235 (29.36%), Postives = 107/235 (45.53%), Query Frame = 3
Query:   18 APLETIRTRMVVGVGSKN---ISGNFIEVIEQQGWQGLWAGNGINMLRIIPTQAIELGTFECVKRAMTTAQEKWSQEECPKVQIGPLSLSFSLSWISPXXXXXXXXXXXSTLACHPLEVLKDRLTVSH-DVYPSLSIAISKIYKEGGIGAFYAGISPTLIGMLPYSTCYYFMYETLKKKYCNSKNKRSLNRPEMLALGALAGFTAST-----ISFPLEVARKRLMVGPLQGKCPP 695
            APL+  +  M V    KN   + G    +I++ G + LW GNGIN+L+I P  AI+   FE  K       E    +E  ++  G L+++ S + I                  +P+EVLK RLT+     Y  L     +I ++ G  A Y G  P ++G++PY+     +YE L   +   K+ R +  P    L +L+  T ST      S+PL + R R+     QG+  P
Sbjct:  109 APLDRAKVYMQVYSSKKNFMNLLGGLRSLIQEGGIRSLWRGNGINVLKIAPEYAIKFSVFEQCKNYFCGVHESPPFQE--RLLAGSLAVATSQTLI------------------NPMEVLKTRLTLRRTGQYKGLLDCARQILEQEGTRALYRGYLPNMLGIIPYACTDLAVYEMLNCLWL--KSGRDMKDPS--GLVSLSSVTLSTTCGQMASYPLTLVRTRMQA---QGQLGP 316          
BLAST of DY305927 vs. ExPASy Swiss-Prot
Match: YIKC_SCHPO (Uncharacterized mitochondrial carrier PB17E12.12c OS=Schizosaccharomyces pombe GN=SPAPB17E12.12c PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 2.552e-13
Identity = 55/249 (22.09%), Postives = 110/249 (44.18%), Query Frame = 3
Query:    3 TKAVLAPLETIRTRMVVGVGSK--NISGNFIEVIEQQGWQGLWAGNGINMLRIIPTQAIELGTFECVKRAMTTAQEKWSQEECPKVQIGPLSLSFSLSWISPXXXXXXXXXXXSTLACHPLEVLKDRLTVSHDVYPSLSIAISKIYK--------------------EGGIGAFYAGISPTLIGMLPYSTCYYFMYETLKKKYCNSKNKRSLNRPEMLALGALAGFTASTISFPLEVARKRLMVGPLQG 683
            ++  ++PLE ++    V    +  +++   +++  ++G  G + GNG N LR  P  A++  TF  +K+     +   + E   ++  G ++ + S +                    +PL++ + RL++      S S+AI+ +                      EGG  A Y G+  TL+ ++PY +  +F +E  K+K+ ++ +   L   + L LG   G    T++FP +V R+R  V  + G
Sbjct:   34 SRTAVSPLERMKIIFQVQNNKEYTSLTSTLVKIWNREGLIGFFRGNGTNCLRAFPYGAVQFATFNMLKQRALKNRSHQNLENHERLLFGAIAGAASCA------------------TTYPLDIARTRLSIETAGLTSRSLAINNVANNSLKVKPLTLWSTLLYIVQHEGGYPALYNGLPATLLNVVPYVSICFFTFEFCKQKFFSNAD---LTAFQKLFLGGFTGIIGQTLTFPADVLRRRFQVNRIPG 261          
BLAST of DY305927 vs. ExPASy Swiss-Prot
Match: AGC1_YEAST (Mitochondrial aspartate-glutamate transporter AGC1 OS=Saccharomyces cerevisiae GN=AGC1 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 2.552e-13
Identity = 61/237 (25.74%), Postives = 109/237 (45.99%), Query Frame = 3
Query:   12 VLAPLETIRTRMVVG---VGSKNISGNFIEVIEQQGWQGLWAGNGINMLRIIPTQAIELGTFECVKRAMTTAQEKWSQEECPKVQIGPLSLSFSLSWISPXXXXXXXXXXXSTLACHPLEVLKDRLTVSHDVY----PSLSIAISKIYKEGGIGAFYAGISPTLIGMLPYSTCYYFMYETLKKKYC----NSKNKRS-LNRPEMLALGALAGFTASTISFPLEVARKRLMVGPLQGK 686
            V+ P++ I+TRM         KN     +++I ++G +GL++G G  ++ + P +AI+L   + ++  +T    K S                    + P             +  +PLE++K RL V  D         +   ++I K+ G+   Y G++  L+  +P+S  Y+  Y  LKK       N K KR+ L   E+L  GA+AG  A+ ++ P +V + RL + P +G+
Sbjct:  547 VVYPIDFIKTRMQAQRSLAQYKNSIDCLLKIISREGIKGLYSGLGPQLIGVAPEKAIKLTVNDFMRNRLTDKNGKLS--------------------LFPEIISGASAGACQVIFTNPLEIVKIRLQVQSDYVGENIQQANETATQIVKKLGLRGLYNGVAACLMRDVPFSAIYFPTYAHLKKDLFDFDPNDKTKRNRLKTWELLTAGAIAGMPAAFLTTPFDVIKTRLQIDPRKGE 763          
BLAST of DY305927 vs. ExPASy Swiss-Prot
Match: TPC1_NEUCR (Mitochondrial thiamine pyrophosphate carrier 1 OS=Neurospora crassa GN=tpc-1 PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 3.334e-13
Identity = 64/250 (25.60%), Postives = 110/250 (44.00%), Query Frame = 3
Query:    3 TKAVLAPLETIRTRM------------------VVGVGS--KNISGNFIEVIEQQGWQGLWAGNGINMLRIIPTQAIELGTFECVKRAMTTAQEKWSQEECPKVQIGPLSLSFSLSWISPXXXXXXXXXXXSTLACHPLEVLKDRLTVS--HDVYPSLSIAISKIYKEGGIGAFYAGISPTLIGMLPYSTCYYFMYETLKKKYCNSKNKRSLNRPEMLALGALAGFTASTISFPLEVARKRLMV-GPLQG 683
            ++ V+APL+ ++ R+                  ++G G   K        ++  +G  GLW GN    L  +   A++  T+  + + +  A  K   ++ P     P   SF                  +T   +PL++L+ R        VYPSL  A+  IY   G+  ++ G+ P L  ++PY   ++ +YETL+ +   SK +   +    +A G LA   A T +FPL++ RKR+ V GP +G
Sbjct:   28 SRFVIAPLDVVKIRLQLQHHSLSDPLLHQRRAEIIGGGPVYKGTLPTIRHILRTEGLTGLWKGNIPAELLYVSYAAVQFTTYRSITQFLQAAFPKDQNKQLP-----PSVESFIAG---------ASAGGVATAVTYPLDLLRTRFAAQGVERVYPSLVQALKTIYASEGVTGYFRGLGPGLAQIIPYMGTFFCVYETLRPRL--SKLELPYSSGSAVA-GVLASVMAKTGTFPLDLVRKRIQVQGPTRG 260          
BLAST of DY305927 vs. ExPASy Swiss-Prot
Match: S2541_HUMAN (Solute carrier family 25 member 41 OS=Homo sapiens GN=SLC25A41 PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 9.699e-13
Identity = 64/224 (28.57%), Postives = 103/224 (45.98%), Query Frame = 3
Query:   18 APLETIRTRMVVGVGSKNIS---GNFIEVIEQQGWQGLWAGNGINMLRIIPTQAIELGTFECVKRAMTTAQEKWSQEECPKVQIGPLSLSFSLSWISPXXXXXXXXXXXSTLACHPLEVLKDRLTVSH-DVYPSLSIAISKIYKEGGIGAFYAGISPTLIGMLPYSTCYYFMYETLKKKYCNSKNKRSLNRPEMLALGALAGFTAST-----ISFPLEVARKRL 662
            APL+  +  M V     N +   G    ++++ G++ LW GNGIN+L+I P  AI+   FE  K      Q     +E  ++  G L+++ S + I                  +P+EVLK RLT+     Y  L     +I +  G  A Y G  P ++G++PY+     +YE L+  +   K+ R +  P    L +L+  T ST      S+PL + R R+
Sbjct:  111 APLDRAKVYMQVYSSKTNFTNLLGGLQSMVQEGGFRSLWRGNGINVLKIAPEYAIKFSVFEQCKNYFCGIQGSPPFQE--RLLAGSLAVAISQTLI------------------NPMEVLKTRLTLRRTGQYKGLLDCARQILQREGTRALYRGYLPNMLGIIPYACTDLAVYEMLQCFWV--KSGRDMGDPS--GLVSLSSVTLSTTCGQMASYPLTLVRTRM 310          
BLAST of DY305927 vs. ExPASy Swiss-Prot
Match: TPC_MOUSE (Mitochondrial thiamine pyrophosphate carrier OS=Mus musculus GN=Slc25a19 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.161e-12
Identity = 59/238 (24.79%), Postives = 109/238 (45.80%), Query Frame = 3
Query:    3 TKAVLAPLETIRTRMVVGV-----GSKNISGNFI-----EVIEQQGWQGLWAGNGINMLRIIPTQAIELGTFECVKRAMTTAQEKWSQEECPKVQIGPLSLSFSLSWISPXXXXXXXXXXXSTLACHPLEVLKDRLTVSHD--VYPSLSIAISKIYKEGGIGAFYAGISPTLIGMLPYSTCYYFMYETLKKKY---CNSKNKRSLNRPEMLALGALAGFTASTISFPLEVARKRLMVG 671
            T+A+++PL+ I+ R  + +        N   + I     ++++++G +  W G+    +  I   A++   FE +   +  A    + +       G LS                     +TL  HP++VL+ RL    +  +Y +L  AI  +YK  G   FY G++PT+I + PY+   +  Y +LK+ Y        K++ N   +L  G  +G  + T ++PL++ +KRL VG
Sbjct:   29 TRALISPLDVIKIRFQLQIERLCPSDPNAKYHGIFQAAKQILQEEGPRAFWKGHVPAQILSIGYGAVQFLAFEELTELLYQANLYQTHQFSAHFVCGGLSAG------------------TATLTVHPVDVLRTRLAAQGEPKIYNNLREAIRTMYKTEGPFVFYKGLTPTVIAIFPYAGLQFSCYRSLKRAYDWLIPPDGKQTGNLKNLLC-GCGSGVISKTFTYPLDLIKKRLQVG 247          
BLAST of DY305927 vs. ExPASy Swiss-Prot
Match: EAAC_ARATH (Probable envelope ADP,ATP carrier protein, chloroplastic OS=Arabidopsis thaliana GN=EAAC PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.161e-12
Identity = 60/230 (26.09%), Postives = 104/230 (45.22%), Query Frame = 3
Query:    6 KAVLAPLETIRTRMV-----VGVGSKNISGNFIEVI----EQQGWQGLWAGNGINMLRIIPTQAIELGTFECVKRAMTTAQEKWSQEECPKVQIGPLSLSFSLSWISPXXXXXXXXXXXSTLACHPLEVLKDRLTVSHDVYPSLSIAISKIYKEGGIGAFYAGISPTLIGMLPYSTCYYFMYETLKKKYCNSKNKRSLNRPEMLALGALAGFTASTISFPLEVARKRLMV 668
            K V APL+ I+  M      +G  S   +  FIE I    +++G +G W GN   ++R++P  A++L  +E  K       ++ S        IG L+        S             TL  +PL+VL+ RL V         +A+S +  EG I +FY G+ P+L+G+ PY    + +++ +KK       K++      L    L+   A+   +PL+  R+++ +
Sbjct:  102 KTVTAPLDRIKLLMQTHGIRLGQQSAKKAIGFIEAITLIAKEEGVKGYWKGNLPQVIRVLPYSAVQLLAYESYKNLFKGKDDQLSV-------IGRLAAGACAGMTS-------------TLLTYPLDVLRLRLAVEPRYRTMSQVALSMLRDEG-IASFYYGLGPSLVGIAPYIAVNFCIFDLVKKSLPEEYRKKA---QSSLLTAVLSAGIATLTCYPLDTVRRQMQM 307          
The following BLAST results are available for this feature:
BLAST of DY305927 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
YBT5_SCHPO5.143e-1426.03Uncharacterized mitochondrial carrier C12D12.05c O... [more]
MCFB_DICDI5.143e-1426.02Mitochondrial substrate carrier family protein B O... [more]
TPC_BOVIN1.496e-1325.21Mitochondrial thiamine pyrophosphate carrier OS=Bo... [more]
S2541_BOVIN1.496e-1329.36Solute carrier family 25 member 41 OS=Bos taurus G... [more]
YIKC_SCHPO2.552e-1322.09Uncharacterized mitochondrial carrier PB17E12.12c ... [more]
AGC1_YEAST2.552e-1325.74Mitochondrial aspartate-glutamate transporter AGC1... [more]
TPC1_NEUCR3.334e-1325.60Mitochondrial thiamine pyrophosphate carrier 1 OS=... [more]
S2541_HUMAN9.699e-1328.57Solute carrier family 25 member 41 OS=Homo sapiens... [more]
TPC_MOUSE2.161e-1224.79Mitochondrial thiamine pyrophosphate carrier OS=Mu... [more]
EAAC_ARATH2.161e-1226.09Probable envelope ADP,ATP carrier protein, chlorop... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM2DF08RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305927 ID=DY305927; Name=DY305927; organism=Citrus sinensis; type=EST; length=1250bp
GGACTAAAGCTGTTCTTGCTCCTCTTGAGACCATCAGGACGAGAATGGTG
GTTGGTGTTGGATCCAAAAATATTTCTGGTAATTTCATTGAAGTAATTGA
GCAGCAGGGTTGGCAAGGACTATGGGCTGGCAATGGAATTAATATGCTCC
GAATAATCCCCACCCAGGCAATTGAGCTTGGAACATTTGAGTGTGTCAAA
CGAGCTATGACTACGGCACAAGAGAAATGGAGTCAGGAGGAATGCCCAAA
AGTGCAAATTGGTCCTCTCAGTTTGAGTTTTTCTCTCTCCTGGATTTCTC
CTGTTGCCGTGGCTGGTGCAGCTGCTGGAGTTGTTAGCACGCTTGCGTGC
CATCCTCTTGAAGTATTGAAGGATCGGTTGACTGTAAGTCATGATGTGTA
CCCTAGTTTGAGCATTGCAATTAGCAAAATATATAAGGAGGGTGGAATTG
GTGCTTTTTATGCCGGTATTTCACCTACGTTGATTGGCATGCTCCCGTAT
AGTACTTGTTACTACTTTATGTATGAGACATTGAAAAAGAAATACTGCAA
TTCAAAGAATAAGAGGTCGCTAAACCGTCCGGAGATGCTTGCATTGGGAG
CTCTTGCAGGTTTTACAGCTAGCACCATCAGCTTTCCCTTGGAGGTTGCT
AGGAAACGGCTTATGGTAGGACCTTTGCAGGGTAAATGTCCACCCCACAT
GGCAGCGGCACTTGCTGAAATCATTCTGGAAGAGGGTTTGATGGGCCTTT
ACCAGAATTGGGTGCAAGCTGTTTAAGGGTCATCCTTTCCTCAGAAAATC
CTGGAATGTTTACAAACCTTGAAAGAAATTACTGCCTCCCCTAAACCCTC
GTCCTATTTAAAACAAAAATTAGGTAATTTTCCTAATACCTATTGGGCAA
GTTTCTTGTATAAAGCCCCGCCTTTTACCATATAAAAAATGTGTTTCTTG
TATTAAAATTGAGGCAAGATTTTATTATTAGGTATTTTGTGTGCGCCCCG
ATTTTTTGTCTCCCGCCGTGCCTCTGGCGTGAGGTAGAATTTTCGTTATG
TTTCCGTATTTGATAGTAGCACTAATATAAGATGTGCCGGTGCTGCCAGG
GATGTTCCTCTCTCTATAGGTTCCGAAATAAGGAGAGTAAAAACTAGATA
GANCACAAAGGATACAACGTGTATTTAGAAAGTTGAAGTTGATGTGAATA
TTAGAATGCGTCTTGTTGGTTAATGTANATGGAATATATATTNTGAATAT
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