DY305923
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305923 vs. ExPASy Swiss-Prot
Match: PSB5_CHICK (Proteasome subunit beta type-5 (Fragment) OS=Gallus gallus GN=PSMB5 PE=2 SV=2) HSP 1 Score: 219.164 bits (557), Expect = 4.285e-56 Identity = 110/189 (58.20%), Postives = 134/189 (70.90%), Query Frame = 1 Query: 220 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRKISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSXXXXXXXXXXXXYPATFKNAPSGGGCNRLLCGTKGMEKPS 786 GTTTLAF F GV+VA DSRA+ G YI+SQ+V+K+IEINP +LGTMAGGAADC FW R L +CR++EL NK ISV ASKLLAN++Y Y+GMGLS+GTMI GWD+ GPGLYYVDSEG R+ G F+VGSGS YAYGVLD G + DM+ + A ++A SGG G +G + S Sbjct: 55 GTTTLAFKFAHGVVVAVDSRATAGSYIASQTVQKVIEINPSLLGTMAGGAADCSFWERLLARQCRVYELRNKEPISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGTRIPGEAFAVGSGSSYAYGVLDGGRRPDMATDEALELARRAIFQAARRDAYSGGSVTVYHVGPRGWRRVS 243
BLAST of DY305923 vs. ExPASy Swiss-Prot
Match: PSB8_RAT (Proteasome subunit beta type-8 OS=Rattus norvegicus GN=Psmb8 PE=1 SV=3) HSP 1 Score: 214.927 bits (546), Expect = 8.081e-55 Identity = 111/209 (53.11%), Postives = 140/209 (66.99%), Query Frame = 1 Query: 139 APSFALPLSTDFDEF------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRKISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSXXXXXXXXXXXXYPATFKNAPSGGGCN 747 AP ALP EF ++ K ++ A GTTTLAF F+ GV+VA DSRAS G YI++ V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N +ISV+ ASKLL+N++ YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS GSG+ YAYGV+DSGY+ D+S AT +++ SGG N Sbjct: 39 APELALPRGMQPTEFLRSFGDDQERKVQIEMAHGTTTLAFKFQHGVIVAVDSRASAGSYIATIRVNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMLQYRGMGLSMGSMICGWDKKGPGLYYVDDNGTRLSGQMFSTGSGNTYAYGVMDSGYRQDLSPEEAYDLARRAIVYATHRDSYSGGVVN 247
BLAST of DY305923 vs. ExPASy Swiss-Prot
Match: PSB5_YEAST (Proteasome component PRE2 OS=Saccharomyces cerevisiae GN=PRE2 PE=1 SV=3) HSP 1 Score: 212.616 bits (540), Expect = 4.011e-54 Identity = 115/232 (49.57%), Postives = 149/232 (64.22%), Query Frame = 1 Query: 55 DMKLDTSGLESTSPFFGSGDELCPELSAAPSFALPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRKISVTGASKLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSXXXXXXXXXXXXYPATFKNAPSGGGCN 747 + L++ + S F L A+P L TD D D K + H GTTTLAF F+ G++VA DSRA+ G +++SQ+VKK+IEINP++LGTMAGGAADCQFW LG +CRLHEL K +ISV ASK+L+N++Y Y+G GLS+GTMI G+ + GP +YYVDS+G RLKG F VGSG +AYGVLDS YK+D+S A ++A SGG N Sbjct: 23 EQNLESDFVTGASQFQRLAPSLTVPPIASPQQFLRAHTD-DSRNPDCKIKIAH--GTTTLAFRFQGGIIVAVDSRATAGNWVASQTVKKVIEINPFLLGTMAGGAADCQFWETWLGSQCRLHELREKERISVAAASKILSNLVYQYKGAGLSMGTMICGYTRKEGPTIYYVDSDGTRLKGDIFCVGSGQTFAYGVLDSNYKWDLSVEDALYLGKRSILAAAHRDAYSGGSVN 251
BLAST of DY305923 vs. ExPASy Swiss-Prot
Match: PSB8_HUMAN (Proteasome subunit beta type-8 OS=Homo sapiens GN=PSMB8 PE=1 SV=2) HSP 1 Score: 209.92 bits (533), Expect = 2.600e-53 Identity = 115/232 (49.57%), Postives = 146/232 (62.93%), Query Frame = 1 Query: 82 ESTSPFFGSGDELCPELSA----APSFALPLSTDFDEFQK------DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRKISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSXXXXXXXXXXXXYPATFKNAPSGGGCN 747 ES P GSG P + +P ALP EF + + ++ A GTTTLAF F+ GV+ A DSRAS G YIS+ V K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N +ISV+ ASKLL+N++ YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS GSG+ YAYGV+DSGY+ ++S AT +++ SGG N Sbjct: 16 ESALPVAGSGRRSDPGHYSFSMRSPELALPRGMKPTEFFQSLGGDGERNVQIEMAHGTTTLAFKFQHGVIAAVDSRASAGSYISALRVNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRGMGLSMGSMICGWDKKGPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYDLGRRAIAYATHRDSYSGGVVN 247
BLAST of DY305923 vs. ExPASy Swiss-Prot
Match: PSB8_BOVIN (Proteasome subunit beta type-8 OS=Bos taurus GN=PSMB8 PE=1 SV=2) HSP 1 Score: 209.92 bits (533), Expect = 2.600e-53 Identity = 108/209 (51.67%), Postives = 140/209 (66.99%), Query Frame = 1 Query: 139 APSFALPLSTDFDEFQK------DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRKISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSXXXXXXXXXXXXYPATFKNAPSGGGCN 747 +P ALP EF + ++K ++ A GTTTLAF F+ GV+VA DSRAS G YI++ V K+IEINPY+LGTM+G AADC +W R L +CRL+ L N +ISV+ ASKLL+N++ YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS GSG+ +AYGV+DSGY+ D+S AT +++ SGG N Sbjct: 39 SPELALPRGMQPTEFFRSLGGNGESKVQIEMAHGTTTLAFKFQHGVIVAVDSRASAGNYIATLKVNKVIEINPYLLGTMSGCAADCLYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRGMGLSMGSMICGWDKKGPGLYYVDENGTRLSGNMFSTGSGNSHAYGVMDSGYRPDLSIEEAYDLGRRAIVHATHRDSYSGGVVN 247
BLAST of DY305923 vs. ExPASy Swiss-Prot
Match: PSB8_MOUSE (Proteasome subunit beta type-8 OS=Mus musculus GN=Psmb8 PE=1 SV=2) HSP 1 Score: 209.534 bits (532), Expect = 3.395e-53 Identity = 109/209 (52.15%), Postives = 137/209 (65.55%), Query Frame = 1 Query: 139 APSFALPLSTDFDEF------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRKISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSXXXXXXXXXXXXYPATFKNAPSGGGCN 747 AP ALP F ++ ++ A GTTTLAF F+ GV+VA DSRA+ G YISS + K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N +ISV+ ASKLL+N++ YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS GSG+ YAYGV+DSGY+ D+S AT ++ SGG N Sbjct: 39 APELALPRGMQPTAFLRSFGGDQERNVQIEMAHGTTTLAFKFQHGVIVAVDSRATAGSYISSLRMNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMLQYRGMGLSMGSMICGWDKKGPGLYYVDDNGTRLSGQMFSTGSGNTYAYGVMDSGYRQDLSPEEAYDLGRRAIAYATHRDNYSGGVVN 247
BLAST of DY305923 vs. ExPASy Swiss-Prot
Match: PSB8_CANFA (Proteasome subunit beta type-8 OS=Canis familiaris GN=PSMB8 PE=1 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 2.874e-52 Identity = 110/211 (52.13%), Postives = 138/211 (65.40%), Query Frame = 1 Query: 139 APSFALPLSTDFDEF--------QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRKISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSXXXXXXXXXXXXYPATFKNAPSGGGCN 747 AP A+P EF +K+ + + H GTTTLAF F+ GV+VA DSRA+ G YISS V K+IEINP +LGTM+G AADCQ+W R L +CRL+ L N +ISV+ ASKLL+N++Y YRGM LS+G+MI GWD+ GPGLYYVD G RL G FS GSGS YAYGV+DSGY+ +S AT +++ SGG N Sbjct: 39 APELAVPRGMQPTEFFQSLGENGEKNIRKEMVH--GTTTLAFKFQHGVIVAVDSRATAGNYISSSRVNKVIEINPSLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMVYQYRGMDLSMGSMICGWDKKGPGLYYVDQNGTRLSGNMFSTGSGSTYAYGVMDSGYQPSLSPEEAYELGRRAITYATHRDSYSGGIIN 247
BLAST of DY305923 vs. ExPASy Swiss-Prot
Match: PSB11_HUMAN (Proteasome subunit beta type-11 OS=Homo sapiens GN=PSMB11 PE=2 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 4.600e-42 Identity = 96/221 (43.44%), Postives = 131/221 (59.28%), Query Frame = 1 Query: 124 PELSAAPSFALPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRKISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSXXXXXXXXXXXXYPATFKNAPSGGGCNRLLCGTKGMEKPS 786 P L A +A+P D F + L H GTTTLAF F+ GV+ AAD+R+S G Y++ + K+I ++ ++LGT +G +ADC W+R L + RL EL + SV A+KLL+ ++ YRG+ L V T + GWD +GP L+YV S+G RL+G FSVGSGSPYAYGVLD GY++DMS AT ++A SGG + G E S Sbjct: 19 PHLPRAGGWAVPRGCDPQTFLQIHGPRLAH--GTTTLAFRFRHGVIAAADTRSSCGSYVACPASCKVIPVHQHLLGTTSGTSADCATWYRVLQRELRLRELREGQLPSVASAAKLLSAMMSQYRGLDLCVATALCGWDRSGPELFYVYSDGTRLQGDIFSVGSGSPYAYGVLDRGYRYDMSTQEAYALARCAVAHATHRDAYSGGSVDLFHVRESGWEHVS 237
BLAST of DY305923 vs. ExPASy Swiss-Prot
Match: PSB11_MOUSE (Proteasome subunit beta type-11 OS=Mus musculus GN=Psmb11 PE=1 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 2.524e-40 Identity = 93/216 (43.06%), Postives = 127/216 (58.80%), Query Frame = 1 Query: 130 LSAAPSFALPLSTDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRKISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSXXXXXXXXXXXXYPATFKNAPSGGGCNRLLCGTKGME 777 L A +A+P D F + L H GTTTLAF F+ GV+ AAD+R+S G Y++ + +K+I ++ +LGT +G +ADC W+R L + RL EL + SV G +KLLA ++ YRG+ L V T + GWD +GP L+YV S+G L+G FSVGSGSPYAYGVLD GY +DM+ AT ++A SGG + G E Sbjct: 21 LPQAGGWAVPRGCDPQTFLQIHGPRLAH--GTTTLAFRFRHGVIAAADTRSSCGSYVACPASRKVIPVHQRLLGTTSGTSADCATWYRVLRRELRLRELREGQLPSVAGTAKLLAAMMSCYRGLDLCVATALCGWDHSGPALFYVYSDGTCLQGDIFSVGSGSPYAYGVLDRGYHYDMTIQEAYTLARCAVAHATHRDAYSGGSVDLFHVRESGWE 234
BLAST of DY305923 vs. ExPASy Swiss-Prot
Match: PSB8_PIG (Proteasome subunit beta type-8 (Fragment) OS=Sus scrofa GN=PSMB8 PE=1 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 7.882e-26 Identity = 53/85 (62.35%), Postives = 68/85 (80.00%), Query Frame = 1 Query: 412 RLHELANKRKISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMS 666 RL+ L N +ISV+ ASKL +N++Y YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS GSG+ YAYGV+DSG+++D+S Sbjct: 1 RLYYLRNGARISVSAASKLXSNMMYQYRGMGLSMGSMICGWDKKGPGLYYVDENGTRLSGNMFSTGSGNTYAYGVMDSGHRYDLS 85 The following BLAST results are available for this feature:
BLAST of DY305923 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305923 ID=DY305923; Name=DY305923; organism=Citrus sinensis; type=EST; length=1275bpback to top |