DY305923
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305923 vs. ExPASy Swiss-Prot
Match: PSMB_METTE (Proteasome subunit beta OS=Methanosarcina thermophila GN=psmB PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 3.312e-24 Identity = 59/177 (33.33%), Postives = 106/177 (59.89%), Query Frame = 1 Query: 208 KHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRKISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFS-VGSGSPYAYGVLDSGYKFDMSXXXXXXXXXXXXYPATFKNAPSG 735 K+ KGTTT+ + +G+++A++ RA+MG +I+S++ KK+ +I+ + T AG D Q R + ++ +L+++ +++ G + L++N L R + V +I G D+ GPG+Y +D+ GG ++ TR S GSGSP AYGVL+ Y+ +M+ + AT +++ SG Sbjct: 5 KYLKGTTTVGVVCTDGIVLASEQRATMGHFIASKTAKKVYQIDDLVGMTTAGSVGDAQQLVRLVSVESQLYKMRRDESMTIKGITTLMSNFLSRNRYYPMMVQLLIGGVDKNGPGIYSLDAMGGSIEETRISATGSGSPMAYGVLEDQYRENMTVKEGLDLAIRAIHNATKRDSASG 181
BLAST of DY305923 vs. ExPASy Swiss-Prot
Match: PSMB_METTH (Proteasome subunit beta OS=Methanobacterium thermoautotrophicum GN=psmB PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 5.649e-24 Identity = 60/149 (40.27%), Postives = 87/149 (58.39%), Query Frame = 1 Query: 217 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRKISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDM 663 KGTTT+ K+GV+ A + RASMG I+ ++ KI +I+ ++ T+AG AD Q + L + L+ + N KIS+ A+ L ANIL+S R V T++ G DE G +Y +D GG + S GSGSP AYGVL+ Y ++ Sbjct: 8 KGTTTVGITCKDGVVFATERRASMGNLIAHKATDKIFKIDEHIAATIAGSVADAQSLMKYLKAEAALYRMRNSEKISIEAAAALAANILHSSRFYPFIVQTLLGGVDENGAKIYSLDPSGGMIPDKFVSTGSGSPVAYGVLEDRYSDEL 156
BLAST of DY305923 vs. ExPASy Swiss-Prot
Match: PSMB_ARCFU (Proteasome subunit beta OS=Archaeoglobus fulgidus GN=psmB PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 3.100e-22 Identity = 62/176 (35.23%), Postives = 96/176 (54.55%), Query Frame = 1 Query: 217 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRKISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRF-SVGSGSPYAYGVLDSGYKFDMSXXXXXXXXXXXXYPATFKNAPSGGG 741 KGTTT+ + K+GV++A + RA+MG +I+S++ KKI +I M T AG D QF R + I+ L+E+ +RK +V + L +N+L SYR V +I G D G +Y +D GG ++ + GSGS AYGVL+ + ++ Y A +++ SG G Sbjct: 10 KGTTTVGLVCKDGVVMATEKRATMGNFIASKAAKKIYQIADRMAMTTAGSVGDAQFLARIIKIEANLYEIRRERKPTVRAIATLTSNLLNSYRYFPYLVQLLIGGIDSEGKSIYSIDPIGGAIEEKDIVATGSGSLTAYGVLEDRFTPEIGVDEAVELAVRAIYSAMKRDSASGDG 185
BLAST of DY305923 vs. ExPASy Swiss-Prot
Match: PSMB_METJA (Proteasome subunit beta OS=Methanocaldococcus jannaschii GN=psmB PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 2.456e-19 Identity = 63/189 (33.33%), Postives = 98/189 (51.85%), Query Frame = 1 Query: 217 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRKISVTGASKLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSEGGRLKGTRF-SVGSGSPYAYGVLDSGYKFDMSXXXXXXXXXXXXYPATFKNAPSGGGCNRLLCGTKGME 777 KGTTT+ I + V++A D RAS+G ++ + KK+ +I+ Y+ T+AG D Q R L + +L+++ R I + LL+NIL+S R +I G+D G L+ +D GG + F + GSGSP AYGVL++GY DMS A ++ SG G + + G++ Sbjct: 5 KGTTTVGLICDDAVILATDKRASLGNLVADKEAKKLYKIDDYIAMTIAGSVGDAQAIVRLLIAEAKLYKMRTGRNIPPLACATLLSNILHSSRMFPFLTQIIIGGYDLLEGAKLFSLDPLGGMNEEKTFTATGSGSPIAYGVLEAGYDRDMSVEEGIKLALNALKSAMERDTFSGNGISLAVITKDGVK 193
BLAST of DY305923 vs. ExPASy Swiss-Prot
Match: PB6LB_SALSA (Proteasome subunit beta type-6-B like protein OS=Salmo salar GN=psmb6l-b PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.348e-17 Identity = 63/189 (33.33%), Postives = 100/189 (52.91%), Query Frame = 1 Query: 220 GTTTLAFIFKEGVMVAADSRASMGG-YISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRKISVTGASKLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSEGGRLKGTRFSV-GSGSPYAYGVLDSGYKFDMSXXXXXXXXXXXXYPATFKNAPSGGGCNRLLCGTKGME 777 GTT LA F GV++ +DSRAS+GG Y+SS+++ K+I+++ + +AG AD Q + + H + + V A+ +L + Y+ + L G + AGWD + GP +Y V + GG L F++ GSGS Y YG D+ YK DMS A ++ SGG + ++ +G+E Sbjct: 16 GTTILAVTFNGGVIIGSDSRASIGGSYVSSKTINKLIQVHDRIFCCIAGSLADAQAVTKAAKFQISFHSIQMESPPLVKAAASVLKELCYNNK-EELQAGFITAGWDRKKGPQVYTV-ALGGMLLSQPFTIGGSGSTYIYGYADAKYKPDMSKEECLQFATNALALAMGRDNVSGGVAHLVVITEEGVE 202
BLAST of DY305923 vs. ExPASy Swiss-Prot
Match: PB6LA_SALSA (Proteasome subunit beta type-6-A like protein OS=Salmo salar GN=psmb6l-a PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.348e-17 Identity = 63/189 (33.33%), Postives = 100/189 (52.91%), Query Frame = 1 Query: 220 GTTTLAFIFKEGVMVAADSRASMGG-YISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRKISVTGASKLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSEGGRLKGTRFSV-GSGSPYAYGVLDSGYKFDMSXXXXXXXXXXXXYPATFKNAPSGGGCNRLLCGTKGME 777 GTT LA F GV++ +DSRAS+GG Y+SS+++ K+I+++ + +AG AD Q + + H + + V A+ +L + Y+ + L G + AGWD + GP +Y V + GG L F++ GSGS Y YG D+ YK DMS A ++ SGG + ++ +G+E Sbjct: 16 GTTILAVTFNGGVIIGSDSRASIGGSYVSSKTINKLIQVHDRIFCCIAGSLADAQAVTKAAKFQISFHSIQMESPPLVKAAASVLKELCYNNK-EELQAGFITAGWDRKKGPQVYTV-ALGGMLLSQPFTIGGSGSTYIYGYADAKYKPDMSKEECLQFAKNALALAMGRDNVSGGVAHLVVITEEGVE 202
BLAST of DY305923 vs. ExPASy Swiss-Prot
Match: PSMB_PYRFU (Proteasome subunit beta OS=Pyrococcus furiosus GN=psmB PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 5.121e-17 Identity = 55/150 (36.67%), Postives = 86/150 (57.33%), Query Frame = 1 Query: 217 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRKISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMS 666 KGTTT+ + KEGV++AAD+RAS+G I +++V KI +I+ ++ AG D R L + L++ +++SV + LLANIL + ++ G+DE P L+ VD GG + + GSG +AY +LDS Y+ +MS Sbjct: 9 KGTTTVGLVCKEGVVLAADTRASLGNIIYAKNVTKIHKIDEHLAIAGAGDVGDILNLVRLLKAEANLYKSTVGKEMSVKALATLLANILNGSKYFPYLGWFLVGGYDEK-PRLFSVDMVGGITEDNYAAAGSGMEFAYSILDSEYREEMS 157
BLAST of DY305923 vs. ExPASy Swiss-Prot
Match: PSMB_PYRAB (Proteasome subunit beta OS=Pyrococcus abyssi GN=psmB PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 6.688e-17 Identity = 53/149 (35.57%), Postives = 85/149 (57.05%), Query Frame = 1 Query: 217 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRKISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDM 663 KGTTT+ + +GV++AAD RAS+G + +++V KI +I+ ++ AG D R L + +L+ + +++SV + LLAN+L R + ++ G+DE P LY VD GG + + GSG +AY VLDS Y+ D+ Sbjct: 9 KGTTTVGIVCSDGVVLAADRRASLGNIVYAKNVTKIHKIDEHLAIAGAGDVGDILNLVRLLRAEAKLYYAQSGKRMSVKALATLLANMLNGARMLPYLAWFLVGGFDEK-PRLYSVDMMGGITEDKYVAAGSGMEFAYSVLDSEYREDL 156
BLAST of DY305923 vs. ExPASy Swiss-Prot
Match: PSMB_THEAC (Proteasome subunit beta OS=Thermoplasma acidophilum GN=psmB PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 8.735e-17 Identity = 52/173 (30.06%), Postives = 89/173 (51.45%), Query Frame = 1 Query: 220 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRKISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSXXXXXXXXXXXXYPATFKNAPSGG 738 GTTT+ K+ V++A + R +M +I ++ KK+ +I+ Y T+AG D Q R + + L+ L + + + + LL+N+L + M V ++ G D T P ++ +D+ GG ++ S GSGSP+ YGVL+S Y M+ A +++ SGG Sbjct: 8 GTTTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMTIAGLVGDAQVLVRYMKAELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGID-TAPHVFSIDAAGGSVEDIYASTGSGSPFVYGVLESQYSEKMTVDEGVDLVIRAISAAKQRDSASGG 179
BLAST of DY305923 vs. ExPASy Swiss-Prot
Match: PSMB_PYRHO (Proteasome subunit beta OS=Pyrococcus horikoshii GN=psmB PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 8.735e-17 Identity = 53/150 (35.33%), Postives = 86/150 (57.33%), Query Frame = 1 Query: 217 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRKISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMS 666 KGTTT+ + K+GV++AAD RAS+G I +++V KI +I+ ++ AG D R L + +L+ + +++SV + LLANI+ + ++ G+DE P LY VD GG + + GSG +AY +LDS YK +++ Sbjct: 9 KGTTTVGIVCKDGVVLAADRRASLGNIIYARNVTKIHKIDEHLAIAGAGDVGDILNLVRLLRAEAKLYYSQSGKRMSVKALATLLANIMNGAKYFPYLAWFLVGGYDEK-PKLYSVDMVGGITEDKYATAGSGMEFAYSILDSEYKDNLT 157 The following BLAST results are available for this feature:
BLAST of DY305923 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305923 ID=DY305923; Name=DY305923; organism=Citrus sinensis; type=EST; length=1275bpback to top |