DY305923
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305923 vs. ExPASy Swiss-Prot
Match: PSB6_HUMAN (Proteasome subunit beta type-6 OS=Homo sapiens GN=PSMB6 PE=1 SV=4) HSP 1 Score: 78.5666 bits (192), Expect = 9.039e-14 Identity = 56/188 (29.79%), Postives = 84/188 (44.68%), Query Frame = 1 Query: 220 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRKISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSV-GSGSPYAYGVLDSGYKFDMSXXXXXXXXXXXXYPATFKNAPSGGGCNRLLCGTKGMEK 780 GTT +A F GV++ ADSR + G YI+++ K+ I+ + +G AAD Q + + H + V A+ L + Y YR L G +IAGWD G Y GG + F++ GSGS Y YG +D+ Y+ M+ A ++ SGG G+E+ Sbjct: 34 GTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCCRSGSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYR-EDLMAGIIIAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGGVIRLAAIAESGVER 220
BLAST of DY305923 vs. ExPASy Swiss-Prot
Match: PSB7_BOVIN (Proteasome subunit beta type-7 OS=Bos taurus GN=PSMB7 PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.181e-13 Identity = 49/163 (30.06%), Postives = 82/163 (50.31%), Query Frame = 1 Query: 175 DEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRKISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDM 663 D +K K GTT ++K+G+++ AD+RA+ G ++ ++ KI I+P + AG AAD + + LH L+ R V A+++L +L+ Y+G + ++ G D TGP LY + G K ++GSGS A V + ++ DM Sbjct: 28 DFAKKGYKLPTARKTGTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGY-IGAALVLGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDM 189
BLAST of DY305923 vs. ExPASy Swiss-Prot
Match: PSB9_RAT (Proteasome subunit beta type-9 OS=Rattus norvegicus GN=Psmb9 PE=1 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 1.542e-13 Identity = 56/174 (32.18%), Postives = 83/174 (47.70%), Query Frame = 1 Query: 220 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRKISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSV-GSGSPYAYGVLDSGYKFDMSXXXXXXXXXXXXYPATFKNAPSGG 738 GTT +A F GV+V +DSR S G + ++ K+ ++ + ++G AAD Q + LH L + V A+ ++ NI Y YR L M+AGWD+ G Y + GG L F++ GSGS Y YG +D+ YK M+ A ++ SGG Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAGAAVVNRVFDKLSPLHQRIYCALSGSAADAQAIADMAAYQLELHGLELEEPPLVLAAANIVKNISYKYR-EDLLAHLMVAGWDQHEGGQVY-GTMGGMLIRQPFAIGGSGSTYIYGYVDAAYKPGMTPEECRRFTTDAITLAMNRDGSSGG 191
BLAST of DY305923 vs. ExPASy Swiss-Prot
Match: PSB9_HUMAN (Proteasome subunit beta type-9 OS=Homo sapiens GN=PSMB9 PE=1 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 1.542e-13 Identity = 55/174 (31.61%), Postives = 84/174 (48.28%), Query Frame = 1 Query: 220 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRKISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSV-GSGSPYAYGVLDSGYKFDMSXXXXXXXXXXXXYPATFKNAPSGG 738 GTT +A F GV++ +DSR S G + ++ K+ ++ + ++G AAD Q + LH + + V A+ ++ NI Y YR LS M+AGWD+ G Y + GG L F++ GSGS + YG +D+ YK MS A ++ SGG Sbjct: 20 GTTIMAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHERIYCALSGSAADAQAVADMAAYQLELHGIELEEPPLVLAAANVVRNISYKYR-EDLSAHLMVAGWDQREGGQVY-GTLGGMLTRQPFAIGGSGSTFIYGYVDAAYKPGMSPEECRRFTTDAIALAMSRDGSSGG 191
BLAST of DY305923 vs. ExPASy Swiss-Prot
Match: PSB6_DICDI (Proteasome subunit beta type-6 OS=Dictyostelium discoideum GN=psmB6 PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.542e-13 Identity = 56/188 (29.79%), Postives = 87/188 (46.28%), Query Frame = 1 Query: 220 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRKISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSV-GSGSPYAYGVLDSGYKFDMSXXXXXXXXXXXXYPATFKNAPSGGGCNRLLCGTKGMEK 780 GT+ +A + GV++ ADSR + G YI+++ KI I+ + +G AAD Q + +H + V A+ L + YS + L G ++AGWD+ G Y S GG + F++ GSGS Y YG DS +K M+ A F++ SGG + G+E+ Sbjct: 14 GTSIMAVEYDGGVIMGADSRTTTGAYIANRVTNKITPIHERIYCCRSGSAADTQAISDYVRYYLEMHTSELCDEPDVKTAASLFQLLCYSNKN-NLMAGIIVAGWDKHQGGSVYNISLGGSMVKQPFAIGGSGSTYIYGYCDSKFKPKMTKDECIEFVQNSLALAMFRDGSSGGVIRLCIIDKNGVER 200
BLAST of DY305923 vs. ExPASy Swiss-Prot
Match: PSB6_BOVIN (Proteasome subunit beta type-6 OS=Bos taurus GN=PSMB6 PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.542e-13 Identity = 56/188 (29.79%), Postives = 84/188 (44.68%), Query Frame = 1 Query: 220 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRKISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSV-GSGSPYAYGVLDSGYKFDMSXXXXXXXXXXXXYPATFKNAPSGGGCNRLLCGTKGMEK 780 GTT +A F GV++ ADSR + G YI+++ K+ I+ + +G AAD Q + + H + V A+ L + Y YR L G +IAGWD G Y GG + F++ GSGS Y YG +D+ Y+ M+ A ++ SGG G+E+ Sbjct: 34 GTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCCRSGSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYR-EDLMAGIIIAGWDPQEGGQVYSVPMGGMMVRQPFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGGVIRLAAIAEPGVER 220
BLAST of DY305923 vs. ExPASy Swiss-Prot
Match: PSB7_RAT (Proteasome subunit beta type-7 OS=Rattus norvegicus GN=Psmb7 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.014e-13 Identity = 49/163 (30.06%), Postives = 81/163 (49.69%), Query Frame = 1 Query: 175 DEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRKISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDM 663 D +K K GTT ++K+G+++ AD+RA+ G ++ ++ KI I+P + AG AAD + + LH L R V A+++L +L+ Y+G + ++ G D TGP LY + G K ++GSGS A V + ++ DM Sbjct: 28 DFAKKGFKLPKARKTGTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLTTGRLPRVVTANRMLKQMLFRYQGY-IGAALVLGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDM 189
BLAST of DY305923 vs. ExPASy Swiss-Prot
Match: PSB7_MOUSE (Proteasome subunit beta type-7 OS=Mus musculus GN=Psmb7 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.014e-13 Identity = 49/163 (30.06%), Postives = 81/163 (49.69%), Query Frame = 1 Query: 175 DEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRKISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDM 663 D +K K GTT ++K+G+++ AD+RA+ G ++ ++ KI I+P + AG AAD + + LH L R V A+++L +L+ Y+G + ++ G D TGP LY + G K ++GSGS A V + ++ DM Sbjct: 28 DFAKKGFKLPKARKTGTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLTTGRLPRVVTANRMLKQMLFRYQGY-IGAALVLGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDM 189
BLAST of DY305923 vs. ExPASy Swiss-Prot
Match: PSB7_HUMAN (Proteasome subunit beta type-7 OS=Homo sapiens GN=PSMB7 PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 2.630e-13 Identity = 46/148 (31.08%), Postives = 78/148 (52.70%), Query Frame = 1 Query: 220 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRKISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDM 663 GTT ++K+G+++ AD+RA+ G ++ ++ KI I+P + AG AAD + + LH L+ R V A+++L +L+ Y+G + ++ G D TGP LY + G K ++GSGS A V + ++ DM Sbjct: 43 GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGY-IGAALVLGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDM 189
BLAST of DY305923 vs. ExPASy Swiss-Prot
Match: PSB7B_ARATH (Proteasome subunit beta type-7-B OS=Arabidopsis thaliana GN=PBB2 PE=1 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 2.630e-13 Identity = 68/219 (31.05%), Postives = 102/219 (46.58%), Query Frame = 1 Query: 184 QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRKISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSXXXXXXXXXXXXYPATFKNAPSGGGCNRLLCG-TKGMEKPSGM*CLRTSYNYYQPPPR 837 QK KA GTT + IFK+GV++ AD+RA+ G ++ ++ +KI + P + AG AAD + + + RLH R V A LL L+SY+G +S ++ G D TGP L+ + G ++GSGS A V ++ YK ++ F + G G N +C TKG ++ LR NY +P PR Sbjct: 27 QKGLKAPSFLKTGTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLRLHRYQTGRDSRVVTALTLLKKHLFSYQG-HVSAALVLGGVDITGPHLHTIYPHGSTDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAEAICSGIFNDL--GSGSNVDICVITKGHKE-----YLR---NYMEPNPR 234 The following BLAST results are available for this feature:
BLAST of DY305923 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY305923 ID=DY305923; Name=DY305923; organism=Citrus sinensis; type=EST; length=1275bpback to top |