DY305923
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305923 vs. ExPASy Swiss-Prot
Match: PSB6_TOBAC (Proteasome subunit beta type-6 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 2.908e-12 Identity = 51/185 (27.57%), Postives = 84/185 (45.41%), Query Frame = 1 Query: 187 KDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRKISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSV-GSGSPYAYGVLDSGYKFDMSXXXXXXXXXXXXYPATFKNAPSGG 738 ++T H+ GTT + + GV++ ADSR S G Y+++++ KI ++ + +G AAD Q + H + + +V A+ L + Y+ + L G +I GWD+ G Y GG + F++ GSGS Y YG D +K M+ A ++ SGG Sbjct: 2 ENTDVDQPHSMGTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAADSQIVSDYVRYFLHQHTIQLGQPATVKVAANLTRLLSYNNKDR-LQTGMIIGGWDKYEGGKIYGIPPGGTVLEQPFAIGGSGSSYLYGFFDQAWKEGMTQEEAEKLVVTAVSLAIARDGASGG 185
BLAST of DY305923 vs. ExPASy Swiss-Prot
Match: PSB10_RAT (Proteasome subunit beta type-10 OS=Rattus norvegicus GN=Psmb10 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 2.908e-12 Identity = 46/157 (29.30%), Postives = 79/157 (50.32%), Query Frame = 1 Query: 196 KATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRKISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMS 666 + L GTT +F++GV++ AD+RA+ ++ +S +KI I P + AG AAD + R K LH L+ R+ V +++L L+ Y+G + ++ G D GP LY V G + ++GSG A +L+ ++ +M+ Sbjct: 31 RVPLARKTGTTIAGLVFRDGVILGADTRATNDSVVADKSCEKIHFIAPKIYCCGAGVAADTEMTTRMAASKMELHALSTGREPRVATVTRILRQTLFRYQG-HVGASLIVGGVDLNGPQLYSVHPHGSYSRLPFTALGSGQDAAVALLEDRFQPNMT 186
BLAST of DY305923 vs. ExPASy Swiss-Prot
Match: PSB10_BOVIN (Proteasome subunit beta type-10 OS=Bos taurus GN=PSMB10 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 3.798e-12 Identity = 47/154 (30.52%), Postives = 79/154 (51.30%), Query Frame = 1 Query: 211 HAK--GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRKISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMS 666 HA+ GTT +F++GV++ AD+RA+ ++ + +KI I P + AG AAD + R LH L+ R+ V +++L L+ Y+G + ++ G D TGP LY V G + ++GSG A VL+ ++ +M+ Sbjct: 34 HARKTGTTIAGLVFQDGVILGADTRATNDSVVADKICEKIHFIAPKIYCCGAGVAADAEMTTRMAASNMELHALSTGRECRVATVTRMLRQTLFRYQGY-VGASLIVGGVDFTGPQLYSVHPHGSYSRLPFTALGSGQDAAIAVLEDRFQPNMT 186
BLAST of DY305923 vs. ExPASy Swiss-Prot
Match: PSB10_MOUSE (Proteasome subunit beta type-10 OS=Mus musculus GN=Psmb10 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 4.960e-12 Identity = 47/154 (30.52%), Postives = 80/154 (51.95%), Query Frame = 1 Query: 211 HAK--GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRKISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMS 666 HA+ GTT +F++GV++ AD+RA+ ++ +S +KI I P + AG AAD + R K LH L+ R+ V +++L L+ Y+G + ++ G D GP LY V G + ++GSG A +L+ ++ +M+ Sbjct: 34 HARKTGTTIAGLVFRDGVILGADTRATNDSVVADKSCEKIHFIAPKIYCCGAGVAADTEMTTRMAASKMELHALSTGREPRVATVTRILRQTLFRYQG-HVGASLVVGGVDLNGPQLYEVHPHGSYSRLPFTALGSGQGAAVALLEDRFQPNMT 186
BLAST of DY305923 vs. ExPASy Swiss-Prot
Match: PSB6_ENCCU (Probable proteasome subunit beta type-6 OS=Encephalitozoon cuniculi GN=PRE3 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.105e-11 Identity = 48/154 (31.17%), Postives = 79/154 (51.30%), Query Frame = 1 Query: 208 KHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRKISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSV-GSGSPYAYGVLDSGYKFDMS 666 K GTT +A + +GV++ ADSR SMG Y+SS+ K+ +I + +G +AD Q L + ++ V A+ L + I+ Y L G ++AG+D+ P ++ + S GG L +++ GSGS + YG D ++ MS Sbjct: 6 KEMTGTTIIAIKYDDGVLIGADSRTSMGAYVSSRVTDKLTQITDKIFVCRSGSSADTQMISSYLRMYLSMYSQLEDSIPQVQRAAALASKII--YENPSLLAGLIVAGYDDK-PRVFNI-SLGGSLTERDWAIGGSGSAFIYGYCDVNWRSGMS 155 The following BLAST results are available for this feature:
BLAST of DY305923 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305923 ID=DY305923; Name=DY305923; organism=Citrus sinensis; type=EST; length=1275bpback to top |