DY305916

Overview
NameDY305916
Unique NameDY305916
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1268
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305916 vs. ExPASy Swiss-Prot
Match: CIPK4_ARATH (CBL-interacting serine/threonine-protein kinase 4 OS=Arabidopsis thaliana GN=CIPK4 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.130e-16
Identity = 59/189 (31.22%), Postives = 95/189 (50.26%), Query Frame = 2
Query:    2 KIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYKPPSFEQPNIDLDDVDSIFNESMDSRNLVVERREEGPVAPLTMNAFELISTSQGLNLSSLFEKQMGLVKRETRFTSKRPVNEIISKIEEAASPLGFDVKKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELQNLKE 568
            KI K D++ P W S  A+ +I ++LDPNP TR+++  V+   WF+K  +   F+    +LD            R L  E +    +      AF+LIS S GL+LS LFE++    ++E RFT++     ++ K       LGF V+K   + K+ G     KG  +V  E+ E A  L + +++ + E
Sbjct:  234 KIHKRDYRFPSWISKPARSIIYKLLDPNPETRMSIEAVMGTVWFQKSLEISEFQSSVFELD------------RFLEKEAKSSNAI-----TAFDLISLSSGLDLSGLFERRK---RKEKRFTARVSAERVVEKAGMIGEKLGFRVEKKE-ETKVVGL---GKGRTAVVVEVVEFAEGLVVADVKVVVE 398          
BLAST of DY305916 vs. ExPASy Swiss-Prot
Match: PP395_ARATH (Pentatricopeptide repeat-containing protein At5g21222 OS=Arabidopsis thaliana GN=ATC401 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 3.287e-16
Identity = 40/75 (53.33%), Postives = 53/75 (70.67%), Query Frame = 2
Query:    2 KIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYKPPSFEQ-PNIDLDDVDSIFNESMDSR 223
            KI  ADF  PPW S+  K LI RILDPNP+TRIT+ E++E+ WFKK YKP  FE+    +L DV+++F +S + R
Sbjct:  225 KISSADFSCPPWLSSGVKNLIVRILDPNPMTRITIPEILEDVWFKKDYKPAVFEEKKEANLADVEAVFKDSEEGR 299          
BLAST of DY305916 vs. ExPASy Swiss-Prot
Match: CIPKM_ARATH (CBL-interacting serine/threonine-protein kinase 22 OS=Arabidopsis thaliana GN=CIPK22 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.130e-15
Identity = 61/187 (32.62%), Postives = 90/187 (48.13%), Query Frame = 2
Query:    2 KIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYKPPSFEQPNIDLDDVDSIFNESMDSRNLVVERREEGPVAPLTMNAFELISTSQGLNLSSLFEKQMGLVKRETRFTSKRPVNEIISKIEEAASPLGFDV-KKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELQN 559
            KI KA +K P W S+  +KL+ R+L+PNP  RIT+ E++++ WF  G  P   E   I  DD D                 E G +    +NAF+LIS++   NLS LF   +       +F S      I+ K+EE A  L   + KK    +KL+G      G  +V  ++  +   L MVE++N
Sbjct:  239 KIHKAQYKLPDWTSSDLRKLLRRLLEPNPELRITVEEILKDPWFNHGVDPS--EIIGIQADDYD---------------LEENGKI----LNAFDLISSASSSNLSGLFGNFV-TPDHCDQFVSDESTAVIMRKVEEVAKQLNLRIAKKKERAIKLEGP----HGVANVVVKVRRLTNELVMVEMKN 399          
BLAST of DY305916 vs. ExPASy Swiss-Prot
Match: CIPKR_ORYSJ (Putative CBL-interacting protein kinase 27 OS=Oryza sativa subsp. japonica GN=CIPK27 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 6.853e-14
Identity = 56/164 (34.15%), Postives = 83/164 (50.61%), Query Frame = 2
Query:    2 KIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYKPPSFEQPNIDLDDVDSIFNESMDSRNLVVERREEGPVAPLTMNAFELISTSQGLNLSSLFEKQMGLVKRE-------TRFTSKRPVNEIISKIEE--------AASPLGFDVKKN 448
            K+ + DF  PPW +T A+KLI  +LDPNP TRIT+A ++E  WF+K    P      I  D   +     +D+R    + ++E    P  +NAF LIS S+G +LS LFE                TRF ++   + +++++E         A S L  DVKK+
Sbjct:  223 KMRRGDFCCPPWVTTDARKLIKSLLDPNPGTRITVAGLLETPWFRKTAPVPR----PIIADPAAA----PVDTRGNAGDDKDE---PPEVLNAFHLISLSEGFDLSPLFEHDPAASPGRATARAGGTRFATREAASGVVARLEALAMGGARVAPSLLMVDVKKD 375          
BLAST of DY305916 vs. ExPASy Swiss-Prot
Match: CIPKB_ARATH (CBL-interacting serine/threonine-protein kinase 11 OS=Arabidopsis thaliana GN=CIPK11 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.169e-13
Identity = 53/183 (28.96%), Postives = 88/183 (48.09%), Query Frame = 2
Query:    2 KIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYKPPSFEQPNIDLDDVDSIFNESMDSRNLVVERREEGPVAPLTMNAFELISTSQGLNLSSLFEKQMGLVKRETRFTSKRPVNEIISKIEEAASPLGFDVKKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVE 550
            KI+K +++ P W S   K+ +SR+LD NP TRIT+ E++++ WF +G     F+Q     D+++              ++ E    A  ++NAF+LIS S GL+LS LF           RF S++    +  ++E  A      +KK   + +   E  G+ G   +   I  +   L +VE
Sbjct:  234 KIYKGEYRFPRWMSPDLKRFVSRLLDINPETRITIDEILKDPWFVRG----GFKQIKFHDDEIED-------------QKVESSLEAVKSLNAFDLISYSSGLDLSGLFAGCSNSSGESERFLSEKSPEMLAEEVEGFAREENLRMKKKK-EEEYGFEMEGQNGKFGIGICISRLNDLLVVVE 398          
BLAST of DY305916 vs. ExPASy Swiss-Prot
Match: CIPK4_ORYSJ (CBL-interacting protein kinase 4 OS=Oryza sativa subsp. japonica GN=CIPK4 PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 1.527e-13
Identity = 62/190 (32.63%), Postives = 95/190 (50.00%), Query Frame = 2
Query:    2 KIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEV-IENEWFKKGYKPPSFEQPNIDLDDVDSIFNESMDSRNLVVERREEGPVAPLTMNAFELISTSQGLNLSSLF-EKQMGLVKRETRFTSKRPVNEIISKIEEAASPLGFDV---KKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELQ 556
            K  + +++ P W S  A++L+SR+LDPNP TR+ +  +   + WFK+                VDS  +  ++         +  P  PL  NAF++IS S GL+LS LF E    L  RE RFT+     + + ++  A   LG+ V   KK    L L G +    G  +++ E+ EVAP L +VEL+
Sbjct:  240 KAHRREYELPRWVSQPARRLVSRLLDPNPDTRVAVESLAAHHPWFKRSL-------------SVDSQLDGLLNGEPERAVAFQAAPPPPL--NAFDIISMSPGLDLSGLFGEHDKSL--REKRFTTTASPEKTLEQLGLAGGKLGYVVVVGKKGVECLPLAGGRLS-SGIAAMSVEMSEVAPPLLLVELR 411          
BLAST of DY305916 vs. ExPASy Swiss-Prot
Match: CIPKT_ORYSJ (CBL-interacting protein kinase 29 OS=Oryza sativa subsp. japonica GN=CIPK29 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 5.801e-13
Identity = 51/184 (27.72%), Postives = 87/184 (47.28%), Query Frame = 2
Query:    2 KIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYKPPSFEQPNIDLDDVDSIFNESMDSRNLVVERREEGPVAPLTMNAFELISTSQGLNLSSLFEKQMGLVKRETRFTSKRPVNEIISKIEEAASPLGFDVKKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVEL 553
            KI+   F+ P WFS   + L+ RILDPNP TRI   E+I + WF++     +  Q      D ++ F       ++  +           M AF++++ S G +LS LF  + G   +E  F  + P   ++S++EEA    G+ V +   K        G  G +     +F++A ++ +VE+
Sbjct:  249 KIYAGKFRCPAWFSPELRCLVRRILDPNPATRIDTEEIITHPWFRQDASHFAMAQLMQHGHDEEAKFKTEFKEDDMARD-----------MTAFDILACSPGSDLSGLFGAEPG---KERVFVGE-PAAAVLSRVEEAGKKEGYMVTREGKKGTGPVYVKGENGGIVAKVCVFKIADAVSVVEV 417          
The following BLAST results are available for this feature:
BLAST of DY305916 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 57
Match NameE-valueIdentityDescription
CIPK4_ARATH1.130e-1631.22CBL-interacting serine/threonine-protein kinase 4 ... [more]
PP395_ARATH3.287e-1653.33Pentatricopeptide repeat-containing protein At5g21... [more]
CIPKM_ARATH2.130e-1532.62CBL-interacting serine/threonine-protein kinase 22... [more]
CIPKR_ORYSJ6.853e-1434.15Putative CBL-interacting protein kinase 27 OS=Oryz... [more]
CIPKB_ARATH1.169e-1328.96CBL-interacting serine/threonine-protein kinase 11... [more]
CIPK4_ORYSJ1.527e-1332.63CBL-interacting protein kinase 4 OS=Oryza sativa s... [more]
CIPKT_ORYSJ5.801e-1327.72CBL-interacting protein kinase 29 OS=Oryza sativa ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM2DE06RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305916 ID=DY305916; Name=DY305916; organism=Citrus sinensis; type=EST; length=1268bp
GAAGATATTTAAGGCTGACTTCAAGAGTCCTCCATGGTTCTCGACAAGTG
CAAAGAAACTGATCTCAAGAATTTTGGACCCTAATCCTGTGACACGAATA
ACGATGGCTGAGGTTATTGAGAATGAGTGGTTTAAGAAGGGATATAAGCC
ACCTAGTTTTGAACAACCTAATATTGATCTTGATGATGTGGATTCTATCT
TTAATGAATCGATGGATTCTCGAAACCTTGTTGTGGAGAGGCGAGAAGAA
GGCCCTGTTGCACCTCTCACTATGAATGCGTTTGAGTTGATCTCCACATC
TCAGGGACTCAACCTCAGTTCCCTTTTCGAAAAGCAAATGGGACTTGTGA
AACGAGAAACAAGATTTACATCCAAACGTCCTGTTAACGAAATTATATCG
AAAATTGAGGAAGCTGCATCGCCTTTGGGTTTTGATGTGAAGAAAAATAA
TTTCAAGTTGAAGCTTCAAGGGGAAAAAACTGGACGCAAGGGTCATTTAT
CTGTTGCAACAGAGATTTTTGAGGTGGCCCCTTCACTTTACATGGTTGAG
CTTCAAAATCTGAAGGAGATACCTTAGAATTTCCCAAGTTTTACAACAAC
CTTTCCACTGGGGTTAAAGATGTTGTTTCAAGCCTAGAGATGACACAATT
GTTTAAGGGTCCACCGTCCTTGGTGGCCTATGGTCACCATTTCCGGATTT
GTTGTGAGGACATTAAGAGTTGAATACCGCCCCCCACTCTTCTTATGCCG
CTACAACAAATGAGCAGAGCATTGGTGGCAAACAGAGGACGGATGCATGG
ACAAGGAGTCAGAAATCCAGGTTAAGATGAANATGACGCTTCGTGGGGTT
GACANCGGGGGGGATTATGAGGGAAGAACGGAGTAGGATGAGAATTAATA
GTATTCAGTATAGTTGAGGGTGCATTCGATGGTAGGCTATCCAGAGTATA
ATGGCATNCACAGAGAATCCGGGAGGGGTTCGCATGTGCGAGCATCGCTA
TATCCTGCTCCGGCAGGNCGCGCNNAACTACACCCACCTGAAACAAGTAG
CACGACGGACGAGGNGCAGGACAATACAGCCTGACTGCATCAGAACTCTT
ATACCGCACCGATAACGAAAAAAGTAAGNGAAAAAAGGAGGACGGAAGTG
GTGGACGAGGATGCTGAGTCAGAGAGGGCGTGNAGAGATGCAGAGCACAT
GAGAACTATAGTGCATTGGACACTAGTGTACGCTCGAACAACGGTAAAAA
CAATCGGTGTTCTGGGGG
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