DY305890

Overview
NameDY305890
Unique NameDY305890
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1250
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305890 vs. ExPASy Swiss-Prot
Match: DAPL_LACS1 (Putative N-acetyldiaminopimelate deacetylase OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=dapL PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.267e-12
Identity = 40/107 (37.38%), Postives = 55/107 (51.40%), Query Frame = 1
Query:    7 VVLIFQPAEERGTGAKDMVQEGVLEN--VEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREIDPLDSQVI 321
            +  IFQPAEE  +G   + Q G L+    + I+ LH   + P G +  R G   AG      K  GK GHAA P    D ++A +  V  +Q IVSR +DP+ S V+
Sbjct:  121 MTFIFQPAEENASGGMKLYQSGELDEWMPDEIYALHDNPQLPAGTIGCRKGTLFAGTCEIHVKFIGKSGHAAYPHQANDMVVAGAQFVNQIQTIVSRNVDPIQSVVV 227          
BLAST of DY305890 vs. ExPASy Swiss-Prot
Match: DAPL_LACCB (Putative N-acetyldiaminopimelate deacetylase OS=Lactobacillus casei (strain BL23) GN=dapL PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.161e-12
Identity = 38/108 (35.19%), Postives = 57/108 (52.78%), Query Frame = 1
Query:    7 VVLIFQPAEERGTGAKDMVQEGVLE---NVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREIDPLDSQVI 321
            ++  FQPAEE   G K     G      +++  +GLH     P G +++R G   AG       + GK GHAA+PQ+  D I+A +S +  +Q +V+R + P DS VI
Sbjct:  122 LIFFFQPAEESKNGGKLAYDMGAFTGDWHIDEFYGLHDRPDLPAGTISTRLGTLFAGTTEINVDLIGKSGHAALPQNANDMIVAAASFISQIQTVVARNVGPTDSAVI 229          
BLAST of DY305890 vs. ExPASy Swiss-Prot
Match: DAPL_LACC3 (Putative N-acetyldiaminopimelate deacetylase OS=Lactobacillus casei (strain ATCC 334) GN=dapL PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.161e-12
Identity = 38/108 (35.19%), Postives = 57/108 (52.78%), Query Frame = 1
Query:    7 VVLIFQPAEERGTGAKDMVQEGVLE---NVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREIDPLDSQVI 321
            ++  FQPAEE   G K     G      +++  +GLH     P G +++R G   AG       + GK GHAA+PQ+  D I+A +S +  +Q +V+R + P DS VI
Sbjct:  122 LIFFFQPAEESKNGGKLAYDMGAFTGDWHIDEFYGLHDRPDLPAGTISTRLGTLFAGTTEINVDLIGKSGHAALPQNANDMIVAAASFISQIQTVVARNVGPTDSAVI 229          
BLAST of DY305890 vs. ExPASy Swiss-Prot
Match: DAPL_STRGC (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=dapL PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 4.814e-12
Identity = 37/107 (34.58%), Postives = 56/107 (52.34%), Query Frame = 1
Query:    7 VVLIFQPAEERGTGAKDMVQEGVLEN--VEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREIDPLDSQVI 321
            ++ +FQPAEE   G   M ++G   +   +  +GLH+      G +A+  G   AG    K    GKGGHAA P    D ++A S  +  +Q IVSR +DP++  V+
Sbjct:  119 LLFLFQPAEENEAGGMLMYEDGAFGDWLPDEFYGLHVRPDLKVGDIATNRGTLFAGTCEVKLTFKGKGGHAAFPHEANDALIAASYFITQVQTIVSRNVDPIEGAVV 225          
BLAST of DY305890 vs. ExPASy Swiss-Prot
Match: DAPL_PEDPA (Putative N-acetyldiaminopimelate deacetylase OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=dapL PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 4.814e-12
Identity = 37/108 (34.26%), Postives = 56/108 (51.85%), Query Frame = 1
Query:    7 VVLIFQPAEERGTGAKDMVQEGVLENV---EAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREIDPLDSQVI 321
            ++  FQPAEE  +G+       +  N       +GLH     P GV+  R G   AG      K++GKGGHAA PQ   D ++A +  +  LQ IV+R ++P++  V+
Sbjct:  124 LIFFFQPAEESHSGSVRAFNANIFTNQFRPNEFYGLHSTPTLPAGVIGCRMGTLFAGTTEVNLKLTGKGGHAAYPQDANDMVVAQAYLITQLQTIVARNVNPIEGGVL 231          
BLAST of DY305890 vs. ExPASy Swiss-Prot
Match: DAPL_STRSV (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus sanguinis (strain SK36) GN=dapL PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 6.287e-12
Identity = 37/107 (34.58%), Postives = 56/107 (52.34%), Query Frame = 1
Query:    7 VVLIFQPAEERGTGAKDMVQEGVLEN--VEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREIDPLDSQVI 321
            ++ +FQPAEE   G   M ++G   +   +  +GLH+      G +A+  G   AG    K    GKGGHAA P    D ++A S  +  +Q IVSR +DP++  V+
Sbjct:  119 LLFLFQPAEENEAGGMLMYEDGAFGDWLPDEFYGLHVRPDLKVGDIATNRGTLFAGTCEVKLTFKGKGGHAAFPHEANDALVAASYFITQVQTIVSRNVDPIEGAVV 225          
BLAST of DY305890 vs. ExPASy Swiss-Prot
Match: DAPL_STRMU (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus mutans GN=dapL PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.829e-11
Identity = 36/107 (33.64%), Postives = 56/107 (52.34%), Query Frame = 1
Query:    7 VVLIFQPAEERGTGAKDMVQEGVLEN--VEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREIDPLDSQVI 321
            ++ +FQPAEE   G   M ++G   N   +  +GLH+   +  G +A+      AG         GKGGHAA P +  D ++A S  +  +Q IVSR +DP++  V+
Sbjct:  120 LLFLFQPAEENEAGGMLMYEDGAFGNWQPDEFYGLHVRPDFKVGDIATNTSTLFAGTCEVFITFKGKGGHAAFPHNANDALVAASYFITQVQTIVSRNVDPIEGGVV 226          
BLAST of DY305890 vs. ExPASy Swiss-Prot
Match: DAPL_LACLS (Putative N-acetyldiaminopimelate deacetylase OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=dapL PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 2.389e-11
Identity = 39/107 (36.45%), Postives = 55/107 (51.40%), Query Frame = 1
Query:    7 VVLIFQPAEERGTGAKDMVQEGVLEN--VEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREIDPLDSQVI 321
            ++ +FQPAEE   G K M   G  +N   +  +GLH+      G +A+      AG    +    G GGHAA P    D ++A +  V  +Q IVSR +DPLDS V+
Sbjct:  118 LLFLFQPAEENEAGGKLMYDGGAFKNWLPDEFYGLHVRPDLKVGDIATNEQTLFAGTCEVELTFVGTGGHAAFPHTANDALVAAAYFVTQVQTIVSRNVDPLDSAVV 224          
BLAST of DY305890 vs. ExPASy Swiss-Prot
Match: DAPL_LACLM (Putative N-acetyldiaminopimelate deacetylase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=dapL PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 2.389e-11
Identity = 39/107 (36.45%), Postives = 55/107 (51.40%), Query Frame = 1
Query:    7 VVLIFQPAEERGTGAKDMVQEGVLEN--VEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREIDPLDSQVI 321
            ++ +FQPAEE   G K M   G  +N   +  +GLH+      G +A+      AG    +    G GGHAA P    D ++A +  V  +Q IVSR +DPLDS V+
Sbjct:  118 LLFLFQPAEENEAGGKLMYDGGAFKNWLPDEFYGLHVRPDLKVGDIATNEQTLFAGTCEVELTFVGTGGHAAFPHTANDALVAAAYFVTQVQTIVSRNVDPLDSAVV 224          
BLAST of DY305890 vs. ExPASy Swiss-Prot
Match: DAPL_STRPN (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus pneumoniae GN=dapL PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 4.075e-11
Identity = 35/107 (32.71%), Postives = 57/107 (53.27%), Query Frame = 1
Query:    7 VVLIFQPAEERGTGAKDMVQEGVLEN--VEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREIDPLDSQVI 321
            ++ +FQPAEE   G   M ++G   +   +  +GLH+      G +A+      AG    K +  GKGGHAA P    D ++A S  V  +Q++VSR ++P++  V+
Sbjct:  119 LLFLFQPAEENEAGGMLMYEDGAFGDWLPDQFYGLHVRPDLKVGQIATNTHTLFAGTCEVKIRFKGKGGHAAFPHEANDALVAASYFVTQVQSVVSRNVNPIEGAVV 225          
The following BLAST results are available for this feature:
BLAST of DY305890 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
DAPL_LACS11.267e-1237.38Putative N-acetyldiaminopimelate deacetylase OS=La... [more]
DAPL_LACCB2.161e-1235.19Putative N-acetyldiaminopimelate deacetylase OS=La... [more]
DAPL_LACC32.161e-1235.19Putative N-acetyldiaminopimelate deacetylase OS=La... [more]
DAPL_STRGC4.814e-1234.58Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_PEDPA4.814e-1234.26Putative N-acetyldiaminopimelate deacetylase OS=Pe... [more]
DAPL_STRSV6.287e-1234.58Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_STRMU1.829e-1133.64Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_LACLS2.389e-1136.45Putative N-acetyldiaminopimelate deacetylase OS=La... [more]
DAPL_LACLM2.389e-1136.45Putative N-acetyldiaminopimelate deacetylase OS=La... [more]
DAPL_STRPN4.075e-1132.71Putative N-acetyldiaminopimelate deacetylase OS=St... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM2DB02RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305890 ID=DY305890; Name=DY305890; organism=Citrus sinensis; type=EST; length=1250bp
GGCACTGTTGTTCTCATATTTCAACCAGCTGAGGAACGAGGAACAGGTGC
AAAAGATATGGTTCAAGAAGGTGTTCTTGAAAATGTAGAGGCCATTTTTG
GATTGCATTTGGTGCATAAGTATCCCACTGGCGTTGTTGCTTCACGGCCT
GGAGATTTTCTAGCTGGTTGTGGGAGCTTTAAGGCCAAAATCAGTGGTAA
AGGAGGCCATGCTGCAATCCCACAACACTGCATTGATCCAATTTTGGCAG
TTTCATCGTCAGTCATTAGCTTGCAGAATATTGTTTCCAGGGAAATAGAC
CCATTAGATTCTCAGGTAATTATTCGACATACATGCTTAATCAGAATTTC
GAGCTTTCCCTGCCCCTAACAAGAAAGTTTGGTCATGGCAGGTGGTTTCG
GTAGCTATGATCAATGGAGGGAGTTCATACAACATGATCCCAGACTCGGC
TACAGTAGCTGGAACTTTTAGAGCTTTCAACAAAAAGAGGTTCAATGCAC
TTAGAGAAAGAATCAAAGAGGTACTAGTTTAATTACTGCACTAATTCTAA
TGGCCATTACTATCGTATCAAGATTCACAATTACAATTTCTTTAATTTGT
TCACGATTATCAAATTGCAGCCGTCTGTTCAATCTTTGCTCTCTCTAGGT
ATATATTCAAATTGTGACAATCTGCCGCGTCGCTCGTCCCAGATAGCCGG
TGAGAGAGAACCCCCTTTACGCTTTCCANCCNGTCGTGTTTCCATGTCAC
AAAAGCGGGAGCCATATACAGGCGGTTTAAGTCGGCTTCNNCGACTCCTT
GGTCTTGGACGGAGAGCCCGGGCTTTTATTCTGCCNTTTACCGGTTAAAG
ATTCGTGGGGCGCGGTGTTGTTGGGGCCCNNTGTTTGTGTTTGTTATATG
TTGAGATGCGCCNGGTTTCCATACCTGACGTCCGCGGGGGGGGGGAGGTG
GGTGGAAAGGGGGAGGTGTCGGGGTAGATTANACNCCCCTTAAGGAAACA
GCAGATGGCTCGTCTCACGAACAAAAGAATATAAGTTTTCTGAAATGGGG
GTCTAATGAGATTTGAAGAGCAGGAGATTGGAGGCAGGGCGGGAAAGGTA
GTGTCCTAAGAGGTGCCGTGCCCGGTGAGGTTGAAGGTCGGGCGGGGTGC
GGGGNNGGAGGGGTATAGGGGGGGGGANNAGGNNNANGNNNTANGNNGCG
GNGGNNNANGATGGGGGGGTGGCGGGNNTTNACANTNTATTGANNGATAG
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