DY305882
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305882 vs. ExPASy Swiss-Prot
Match: DXS_BEII9 (1-deoxy-D-xylulose-5-phosphate synthase OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=dxs PE=3 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 3.653e-55 Identity = 113/204 (55.39%), Postives = 143/204 (70.10%), Query Frame = 3 Query: 6 GAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGP-LKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPKEA 614 G+FD++++ LPNMV+MA +DEAEL+HMVATAA D+ P FR+PRG G+G LP G L+IG+GRI+ EG VA+L G+ + + AA L S ISVTVADARF KPLD DL+R+LA HE+LIT+EEGSVGGFGS V L G+LDG LK RSMVLPD ++DH P ++GL ++ I A VL+ LGR EA Sbjct: 435 GSFDVSYLGILPNMVIMAAADEAELVHMVATAAAYDEGPIAFRYPRGEGVGIELP--QIGEILDIGRGRIVREGTTVALLSLGTRLAEASKAAEQLASYGISVTVADARFAKPLDLDLVRRLAKNHEVLITIEEGSVGGFGSFVMQALAEEGLLDGTGLKFRSMVLPDTFLDHDKPEKLYAQAGLDAKGIVAKVLATLGRENEA 636
BLAST of DY305882 vs. ExPASy Swiss-Prot
Match: DXS_RHOPB (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodopseudomonas palustris (strain BisB18) GN=dxs PE=3 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 6.231e-55 Identity = 103/199 (51.76%), Postives = 142/199 (71.36%), Query Frame = 3 Query: 6 GAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 602 G+FD F+ CLPNMV+MA SDEAEL+HMVAT I+DRPS R+PRG G G +P G LEIGKGRI+ EG+++A+L +G+ + +C AA+ L + +S T+ADARF KPLD +L+ +LA +HEIL+T+EEGS+GGFGSHV L G+LDG +++RS+VLPD ++DH +P +GL ++ I V LG+ Sbjct: 435 GSFDNAFLGCLPNMVIMAASDEAELVHMVATQVAINDRPSAVRYPRGEGRGVEMP--EVGIALEIGKGRIVREGNKIALLSFGTRLAECEKAADELATLGLSTTIADARFMKPLDVELVLKLARDHEILLTIEEGSIGGFGSHVMQTLAEHGMLDGEVRMRSLVLPDEFMDHDTPTAMYARAGLDAKGIVKKVFEALGK 631
BLAST of DY305882 vs. ExPASy Swiss-Prot
Match: DXS_OCHA4 (1-deoxy-D-xylulose-5-phosphate synthase OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=dxs PE=3 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 6.231e-55 Identity = 110/199 (55.28%), Postives = 139/199 (69.85%), Query Frame = 3 Query: 6 GAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 602 G+FD F++ LP VVMA SDEAEL HMV TAA D+ P FR+PRG+G+G LP +G LEIGKGRI+ EG +VA+L +G+ +Q+C+ AA+ L + +S TVADARF KPLD DLIR+LA EHE+L+ VEEG+VGGF SHV FL G+LD LK+R++ LPD Y DHG P E+GL I V + LGR Sbjct: 433 GSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEGPISFRYPRGDGVGVDLP--ERGQLLEIGKGRIVREGTKVALLSFGTRLQECLAAADELGAAGLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFASHVLQFLATDGLLDRGLKVRALTLPDTYQDHGKPDAMYAEAGLDRTGIVHAVFAALGR 629
BLAST of DY305882 vs. ExPASy Swiss-Prot
Match: DXS_BRUO2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=dxs PE=3 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 6.231e-55 Identity = 110/199 (55.28%), Postives = 139/199 (69.85%), Query Frame = 3 Query: 6 GAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 602 G+FD F++ LP VVMA SDEAEL HMV TAA D+ P FR+PRG+G+G LP +G+ LEIGKGRI+ EG +VA+L +G+ +Q+C+ AA L + +S TV DARF KPLD DLIR+LA EHE+L+ VEEG+VGGFGSHV FL G+LD LK+R++ LPD Y DHG P E+GL I TV + L R Sbjct: 433 GSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEGPISFRYPRGDGVGVDLP--ERGSVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGAAGLSTTVVDARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFGSHVLQFLATDGLLDRGLKVRALTLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAALHR 629
BLAST of DY305882 vs. ExPASy Swiss-Prot
Match: DXS_BRUME (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella melitensis GN=dxs PE=3 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 6.231e-55 Identity = 110/199 (55.28%), Postives = 139/199 (69.85%), Query Frame = 3 Query: 6 GAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 602 G+FD F++ LP VVMA SDEAEL HMV TAA D+ P FR+PRG+G+G LP +G+ LEIGKGRI+ EG +VA+L +G+ +Q+C+ AA L + +S TVADARF KPLD DLIR+LA EHE+L+ VEEG+VGGFGSHV FL G+LD K+R++ LPD Y DHG P E+GL I TV + L R Sbjct: 433 GSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEGPISFRYPRGDGVGVDLP--ERGSVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGAAGLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFGSHVLQFLATDGLLDRGFKVRALTLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAALHR 629
BLAST of DY305882 vs. ExPASy Swiss-Prot
Match: DXS_BRUMB (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=dxs PE=3 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 6.231e-55 Identity = 110/199 (55.28%), Postives = 139/199 (69.85%), Query Frame = 3 Query: 6 GAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 602 G+FD F++ LP VVMA SDEAEL HMV TAA D+ P FR+PRG+G+G LP +G+ LEIGKGRI+ EG +VA+L +G+ +Q+C+ AA L + +S TVADARF KPLD DLIR+LA EHE+L+ VEEG+VGGFGSHV FL G+LD K+R++ LPD Y DHG P E+GL I TV + L R Sbjct: 433 GSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEGPISFRYPRGDGVGVDLP--ERGSVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGAAGLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFGSHVLQFLATDGLLDRGFKVRALTLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAALHR 629
BLAST of DY305882 vs. ExPASy Swiss-Prot
Match: DXS_BRUAB (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella abortus GN=dxs PE=3 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 8.138e-55 Identity = 110/199 (55.28%), Postives = 140/199 (70.35%), Query Frame = 3 Query: 6 GAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 602 G+FD F++ LP VVMA SDEAEL HMV TAA D+ P FR+PRG+G+G LP +G+ LEIGKGRI+ EG +VA+L +G+ +Q+C+ AA L + +S TVADARF KPLD DLIR+LA EHE+L+ VEEG+VGGF SHV FL G+LD LK+R+++LPD Y DHG P E+GL I TV + L R Sbjct: 433 GSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEGPISFRYPRGDGVGVDLP--ERGSVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGAAGLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFSSHVLQFLATDGLLDRGLKVRALMLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAALHR 629
BLAST of DY305882 vs. ExPASy Swiss-Prot
Match: DXS_BRUA1 (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella abortus (strain S19) GN=dxs PE=3 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 8.138e-55 Identity = 110/199 (55.28%), Postives = 140/199 (70.35%), Query Frame = 3 Query: 6 GAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 602 G+FD F++ LP VVMA SDEAEL HMV TAA D+ P FR+PRG+G+G LP +G+ LEIGKGRI+ EG +VA+L +G+ +Q+C+ AA L + +S TVADARF KPLD DLIR+LA EHE+L+ VEEG+VGGF SHV FL G+LD LK+R+++LPD Y DHG P E+GL I TV + L R Sbjct: 433 GSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEGPISFRYPRGDGVGVDLP--ERGSVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGAAGLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFSSHVLQFLATDGLLDRGLKVRALMLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAALHR 629
BLAST of DY305882 vs. ExPASy Swiss-Prot
Match: DXS1_JANSC (1-deoxy-D-xylulose-5-phosphate synthase 1 OS=Jannaschia sp. (strain CCS1) GN=dxs1 PE=3 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 8.138e-55 Identity = 110/198 (55.56%), Postives = 142/198 (71.72%), Query Frame = 3 Query: 6 GAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLG 599 G++DI++++ LP VVMA +DEAEL HMV TA IDDRPS FRFPRG G+G +P ++GT LEIGKGR++ EG+RVAIL +G+ +++ AA L + I+ T+ADARF KPLD LI QLA HE LITVEEG+VGGFGSHV H L + + D +K RSMVLPD +ID SP D +G+++ I A VL+ LG Sbjct: 436 GSYDISYLANLPGFVVMAAADEAELRHMVRTALEIDDRPSAFRFPRGEGMGVDMP--DRGTALEIGKGRMISEGNRVAILNFGTRLKEVQEAAETLSQRGITPTIADARFAKPLDEALILQLARHHEALITVEEGAVGGFGSHVAHLLAENAVFDTGIKYRSMVLPDIFIDQASPKDMYAVAGMNAEDIVAKVLTTLG 631
BLAST of DY305882 vs. ExPASy Swiss-Prot
Match: DXS_MARMM (1-deoxy-D-xylulose-5-phosphate synthase OS=Maricaulis maris (strain MCS10) GN=dxs PE=3 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 1.813e-54 Identity = 109/203 (53.69%), Postives = 143/203 (70.44%), Query Frame = 3 Query: 6 GAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPKEA 614 G+FDI ++ LP MV+MA +DE EL MV TAA+IDD PS FR+PRGNG G +P + PLEIGKGRI+ EG R+AIL G+ +++ + AA+ L +Q S TVADARF KPLD DLI +LA EHE+LITVEEG+VGGFG+ V H L G LD L++R++ LPD + D +P D E +GL++RHI+A L +G+ A Sbjct: 432 GSFDIGYLGALPGMVLMAAADELELSRMVKTAALIDDGPSAFRYPRGNGTGIEIPDQIE--PLEIGKGRIVREGSRIAILSLGTRLEESLKAADALAAQGFSTTVADARFAKPLDEDLILRLAREHEVLITVEEGAVGGFGAFVLHMLADKGALDRGLRIRTLTLPDVFQDQEAPFDMYETAGLNARHIAAKALEAMGKDDAA 632 The following BLAST results are available for this feature:
BLAST of DY305882 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305882 ID=DY305882; Name=DY305882; organism=Citrus sinensis; type=EST; length=883bpback to top |