DY305882
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305882 vs. ExPASy Swiss-Prot
Match: DXS_RHIME (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhizobium meliloti GN=dxs PE=3 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 9.948e-53 Identity = 104/199 (52.26%), Postives = 137/199 (68.84%), Query Frame = 3 Query: 6 GAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 602 G+FD T+++ LP VVMA +DEAEL HMV TAA D+ P FR+PRG G+G LP +G L IGKGRI+ +G++VA+L +G+ + C+LAA L + +S TVADARF KPLD DLIRQLA HE+LIT+EEG+VGGF SHV FL G++DG LK+R MV+PD +++ P +GL I +TV LG+ Sbjct: 439 GSFDTTYLATLPGFVVMAAADEAELKHMVRTAAAYDEGPISFRYPRGEGVGVELP--ERGEILAIGKGRIVKQGNKVALLSFGTRLADCLLAAEDLDAAGLSTTVADARFAKPLDHDLIRQLARHHEVLITIEEGAVGGFASHVLQFLAEEGLIDGGLKVRPMVMPDIWMEQAKPEAMYARAGLDRAGIVSTVFKALGQ 635
BLAST of DY305882 vs. ExPASy Swiss-Prot
Match: DXS2_RHOS4 (1-deoxy-D-xylulose-5-phosphate synthase 2 OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=dxs2 PE=3 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 9.948e-53 Identity = 104/198 (52.53%), Postives = 138/198 (69.70%), Query Frame = 3 Query: 6 GAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLG 599 G+FD+ F+S LP +VVMA +DEAEL+HMVATAA D+ P FR+PRG+G+G +P KG PL+IG+GR++ EG R+A+L +G+ + + +AA L ++ IS TVADARF KPLD DLI QLA HE LIT+EEG++GGFGSHV L +G+ D + RSMVLPD +IDH S +GL++ I L LG Sbjct: 434 GSFDVAFLSNLPGIVVMAAADEAELVHMVATAAAHDEGPIAFRYPRGDGVGVEMPV--KGVPLQIGRGRVVSEGTRIALLSFGTRLAEVQVAAEALAARGISPTVADARFAKPLDRDLILQLAAHHEALITIEEGAIGGFGSHVAQLLAEAGVFDRGFRYRSMVLPDTFIDHNSAEVMYATAGLNAADIERKALETLG 629
BLAST of DY305882 vs. ExPASy Swiss-Prot
Match: DXS_NITHX (1-deoxy-D-xylulose-5-phosphate synthase OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=dxs PE=3 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 1.299e-52 Identity = 103/200 (51.50%), Postives = 137/200 (68.50%), Query Frame = 3 Query: 6 GAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILD-GPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 602 G+FD ++ CLPN V+MA SDEAEL+HMVAT I+DRPS R+PRG G G +P G PL IGKGRI+ +G +VA+L G+ + +C AA+ L + +S T+ADARF KPLD DL+ +LA +H++LIT+EEGS+GGFGSHV L G LD G +++R+MVLPD ++DH +P GL R I A V LG+ Sbjct: 461 GSFDNAYLGCLPNFVIMAASDEAELVHMVATQVAINDRPSAVRYPRGEGRGVEMP--EVGVPLPIGKGRIVRQGSKVALLSLGTRLAECEKAADELAAHGLSTTIADARFMKPLDVDLVLKLARDHDVLITIEEGSIGGFGSHVMQTLAEHGALDSGQVRVRAMVLPDEFLDHDTPNAMYASVGLDDRGIVAKVFEALGK 658
BLAST of DY305882 vs. ExPASy Swiss-Prot
Match: DXS_AGRVS (1-deoxy-D-xylulose-5-phosphate synthase OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=dxs PE=3 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 1.299e-52 Identity = 105/199 (52.76%), Postives = 138/199 (69.35%), Query Frame = 3 Query: 6 GAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 602 G+FD F++ LP VVMA +DEAEL HMV TAA D+ P FR+PRG G+G +P +G L IGKGRI+ EG +VA+L +G+ + +C++AA L + + TVADARF KPLD DLIRQLA H +LITVEEG+VGGFGS V H L G+LD LK+RS+VLPD ++D P E++GL ++ I +TV + L R Sbjct: 434 GSFDTGFLASLPGFVVMAAADEAELKHMVRTAAAYDEGPISFRYPRGEGVGVQMP--ERGEILPIGKGRIIKEGSKVALLSFGTRLAECLVAAEDLDAAGLPTTVADARFAKPLDLDLIRQLARHHAVLITVEEGAVGGFGSQVLHMLANEGLLDHGLKVRSLVLPDLWMDQAKPDVMYEKAGLDAKGIVSTVFTALSR 630
BLAST of DY305882 vs. ExPASy Swiss-Prot
Match: DXS_RHIE6 (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhizobium etli (strain CIAT 652) GN=dxs PE=3 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 1.100e-51 Identity = 105/199 (52.76%), Postives = 136/199 (68.34%), Query Frame = 3 Query: 6 GAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 602 G+FD F++ LP VVMA +DEAEL HMV TA D P FR+PRG G+G +P +G L+IGKGRI+ EG +VA+L +G+ + C+LAA L++ +S TVADARF KPLD DLIRQLA HE+LITVEEGSVGGFGS V +L+ G+LD LK+RS+V+PD +++ P +GL I +TV LGR Sbjct: 434 GSFDTAFLATLPGFVVMAAADEAELKHMVRTAVAYDAGPISFRYPRGEGVGVDMPA--RGEILQIGKGRIVKEGTKVALLSFGTRLADCLLAAEDLEAAGLSTTVADARFAKPLDHDLIRQLARHHEMLITVEEGSVGGFGSQVMQYLSSEGLLDNGLKIRSLVMPDIWMEQAKPEAMNAHAGLDRAGIVSTVFRALGR 630
BLAST of DY305882 vs. ExPASy Swiss-Prot
Match: DXS_PELUB (1-deoxy-D-xylulose-5-phosphate synthase OS=Pelagibacter ubique GN=dxs PE=3 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 2.450e-51 Identity = 100/197 (50.76%), Postives = 140/197 (71.07%), Query Frame = 3 Query: 6 GAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 596 G+FDIT++S LPN +VMAPSDEAEL+ M T+ I+++P R+PRGNGIG LP ++ +EIGKGR++ EG +V IL G+ +++C +AA LK++ I T+ DARF KPLD +LI + A EHE +ITVEEGS+GGFGSHV + L+ GI D LK R+M+LPD +I+ SP + +GL++ IS +L +L Sbjct: 432 GSFDITYLSTLPNFIVMAPSDEAELVKMTNTSMTINNKPCAIRYPRGNGIGVELPSIDEN--IEIGKGRVIQEGKQVCILSIGTRLEECKIAAAELKNKGIESTIVDARFAKPLDQELILKCAREHEAMITVEEGSIGGFGSHVENLLSEKGIFDKGLKFRTMILPDIFIEQDSPKKMYDVAGLNASQISKKILDIL 626
BLAST of DY305882 vs. ExPASy Swiss-Prot
Match: DXS_NOVAD (1-deoxy-D-xylulose-5-phosphate synthase OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=dxs PE=3 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 2.450e-51 Identity = 100/197 (50.76%), Postives = 141/197 (71.57%), Query Frame = 3 Query: 6 GAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 596 G+FD+T+++ LPN+VVMA +DEAEL+HM TAA+ D P FR+PRGNG+G LP + LEIGKGRI+ +G +VA+L G+ + + + AA+ L ++ +S TVAD RF KPLD LIRQL H++++TVEEGS+GG G+HV + G++DG LK+R+M LPD + DH +P Q +E+GL++ HI TVL L Sbjct: 434 GSFDVTYLATLPNLVVMAAADEAELVHMTYTAALHDSGPIAFRYPRGNGVGVPLPEVPER--LEIGKGRIIRQGSKVALLSLGTRLAEALKAADQLDARGLSTTVADLRFAKPLDVALIRQLMTTHDVIVTVEEGSIGGLGAHVLTMASDEGLVDGGLKIRTMRLPDLFQDHDAPEKQYDEAGLNAPHIVDTVLKAL 628
BLAST of DY305882 vs. ExPASy Swiss-Prot
Match: DXS_AZOC5 (1-deoxy-D-xylulose-5-phosphate synthase OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=dxs PE=3 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 4.179e-51 Identity = 104/197 (52.79%), Postives = 130/197 (65.99%), Query Frame = 3 Query: 6 GAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 596 GAFD+ ++CLP VMAP+DEAEL HM+ATA D P FRFPRG G+G P KG L IGKGR++ EG +A L G+ + C+ A L S IS TVADARF KP+D +LI LA H L+ VEEGSVGGFGS V FL+ G++DG LK+R++ LPD YIDH +PA QL E+GL + I L+L+ Sbjct: 433 GAFDLAMLTCLPGFTVMAPADEAELTHMIATAVGHDAGPIAFRFPRGEGVGVERP--EKGERLPIGKGRVVREGQDIAFLSLGTRLAACLDVAERLSSLGISATVADARFAKPIDRELIAHLARTHAALVVVEEGSVGGFGSQVLQFLSDEGLMDGGLKVRALTLPDTYIDHDTPAAQLAEAGLDADGIYKRALALV 627
BLAST of DY305882 vs. ExPASy Swiss-Prot
Match: DXS_PHEZH (1-deoxy-D-xylulose-5-phosphate synthase OS=Phenylobacterium zucineum (strain HLK1) GN=dxs PE=3 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 7.129e-51 Identity = 104/198 (52.53%), Postives = 133/198 (67.17%), Query Frame = 3 Query: 6 GAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLG 599 G+FD+ FM LP MVVM P+DEAEL +ATA IDDRPS FR+PRG G+G +P PLEIG+GRI+ EG VAIL +G+ + + + AA+ML ++ +S TVADARF KPLD DL+ +LA EHE LITVEEG+VGGFG V H L G LD LK+R++ LPD + D P ++GL + I L+ LG Sbjct: 432 GSFDVGFMGQLPGMVVMGPADEAELARAIATAVAIDDRPSAFRYPRGEGVGVEIPA--LADPLEIGRGRIVREGTAVAILSFGTRLGESLKAADMLAARGLSATVADARFAKPLDVDLLLRLAREHEALITVEEGAVGGFGGFVLHALAEHGALDRGLKIRTLTLPDIFQDQDKPEAMYAQAGLDAEGIVRAALAALG 627
BLAST of DY305882 vs. ExPASy Swiss-Prot
Match: DXS_CAUSK (1-deoxy-D-xylulose-5-phosphate synthase OS=Caulobacter sp. (strain K31) GN=dxs PE=3 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 9.311e-51 Identity = 102/198 (51.52%), Postives = 135/198 (68.18%), Query Frame = 3 Query: 6 GAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLG 599 G FD+ FM LP MV+MA +DE EL HMV+TA IDDRPS FR+PRG G+G +P + PLEIGKGRI+ EG VAI+ G+ + +C+ AA++L ++ +S TVADARF KPLD D++ +LA EHE +ITVEEG++GGFG+ V L G LD LK+R++VLPD + D P ++GL + I LS LG Sbjct: 432 GTFDLGFMGALPGMVLMAAADEVELAHMVSTAVAIDDRPSAFRYPRGEGLGLTIP--DLAAPLEIGKGRIVREGTSVAIVSLGTRLAECLKAADLLAARGLSATVADARFAKPLDVDMLLRLAREHEAIITVEEGAMGGFGAFVLQALATHGALDRGLKIRTLVLPDVFQDQDKPDLMYAQAGLDAEGILRGALSALG 627 The following BLAST results are available for this feature:
BLAST of DY305882 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305882 ID=DY305882; Name=DY305882; organism=Citrus sinensis; type=EST; length=883bpback to top |