DY305882
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305882 vs. ExPASy Swiss-Prot
Match: DXS_VIBVY (1-deoxy-D-xylulose-5-phosphate synthase OS=Vibrio vulnificus (strain YJ016) GN=dxs PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 5.859e-37 Identity = 89/200 (44.50%), Postives = 125/200 (62.50%), Query Frame = 3 Query: 6 GAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 602 GAFD+++M C+PNMV+MAPSDE E M+ T PS R+PRGNG+G P ++ T LEIGKGR++ +G++VAIL +G+ + + AA L + TVAD RF KPLD LIRQLANEH++LIT+EE ++ GG G+ V F+ I+ L L LPD++I G+ + EE GL ++ I + L + Sbjct: 433 GAFDLSYMRCIPNMVIMAPSDENECRQMLYTGHK-HQGPSAVRYPRGNGMGT--PIESEFTALEIGKGRLVRQGEKVAILSFGTFLANALEAAEALNA-----TVADMRFVKPLDEALIRQLANEHDVLITIEENAIAGGAGAGVIEFMMQEKIMKPVLNLG---LPDKFIHQGTQEELHEELGLDAKGIEQAIRHYLAK 621
BLAST of DY305882 vs. ExPASy Swiss-Prot
Match: DXS_VIBVU (1-deoxy-D-xylulose-5-phosphate synthase OS=Vibrio vulnificus GN=dxs PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 9.994e-37 Identity = 88/200 (44.00%), Postives = 125/200 (62.50%), Query Frame = 3 Query: 6 GAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 602 GAFD+++M C+PNMV+MAPSDE E M+ T PS R+PRGNG+G P ++ T LEIGKGR++ +G++VAIL +G+ + + AA L + TVAD RF KPLD L+RQLANEH++LIT+EE ++ GG G+ V F+ I+ L L LPD++I G+ + EE GL ++ I + L + Sbjct: 433 GAFDLSYMRCIPNMVIMAPSDENECRQMLYTGHK-HQGPSAVRYPRGNGMGT--PIESEFTALEIGKGRLVRQGEKVAILSFGTFLANALEAAEALNA-----TVADMRFVKPLDEALLRQLANEHDVLITIEENAIAGGAGAGVIEFMMQEKIMKPVLNLG---LPDKFIHQGTQEELHEELGLDAKGIEQAIRHYLAK 621
BLAST of DY305882 vs. ExPASy Swiss-Prot
Match: DXS_THEEB (1-deoxy-D-xylulose-5-phosphate synthase OS=Thermosynechococcus elongatus (strain BP-1) GN=dxs PE=3 SV=2) HSP 1 Score: 154.066 bits (388), Expect = 9.994e-37 Identity = 85/207 (41.06%), Postives = 122/207 (58.94%), Query Frame = 3 Query: 6 GAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPKEALLI 623 G +DI ++ CLPNMV+MAP DEAEL M+ T D P R+PRGNG G L PLEIGKG +L G+ + ++ YGS+V + A +LK +S V +ARF KPLDT+LI LA + ++T+EEG +GGFGS V L + IL L+L +PD ++H SP + + GL+ ++ T++ G P+ A ++ Sbjct: 433 GMYDIAYLRCLPNMVLMAPKDEAELQRMIVTGINYTDGPIALRYPRGNGYGVALMEEG-WEPLEIGKGELLRSGEDLLLVAYGSMVYPAMQVAEILKEHGMSAAVINARFAKPLDTELILPLAKQIGRVVTLEEGCLMGGFGSAVLEALQEADILVPVLRLG---VPDILVEHASPDESKADLGLTPPQMAETIMQKFGVPQRATVV 635
BLAST of DY305882 vs. ExPASy Swiss-Prot
Match: DXS_ANAVT (1-deoxy-D-xylulose-5-phosphate synthase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=dxs PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 2.226e-36 Identity = 86/195 (44.10%), Postives = 118/195 (60.51%), Query Frame = 3 Query: 6 GAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVL 587 G +DI ++ C+PN+V+MAP DEAE+ MV T P RFPRGNG G L PLEIGKG IL GD V I+GYG++V + AA +L I TV +ARF KPLDT+LI LA + ++T+EEG V GGFGS V L + ++ + ++ + +PD ++H +P + E GL+SR I+ VL Sbjct: 433 GMYDIAYLRCIPNIVMMAPKDEAEMQRMVVTGIEYTTGPIAMRFPRGNGYGVPLMEEG-WEPLEIGKGEILRNGDDVLIIGYGTMVYPSMQAAEILSEHGIEATVINARFVKPLDTELIVPLAQKIGRVVTLEEGCVMGGFGSAVAEALLDADVV---VPVKRIGIPDVLVEHATPDESKAELGLTSRQIAERVL 623
BLAST of DY305882 vs. ExPASy Swiss-Prot
Match: DXS_ANASP (1-deoxy-D-xylulose-5-phosphate synthase OS=Anabaena sp. (strain PCC 7120) GN=dxs PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 3.798e-36 Identity = 86/195 (44.10%), Postives = 118/195 (60.51%), Query Frame = 3 Query: 6 GAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVL 587 G +DI ++ C+PN+V+MAP DEAE+ MV T P RFPRGNG G L PLEIGKG IL GD V I+GYG++V + AA +L I TV +ARF KPLDT+LI LA + ++T+EEG V GGFGS V L + ++ + ++ + +PD ++H +P + E GL+SR I+ VL Sbjct: 433 GMYDIAYLRCIPNIVMMAPKDEAEMQRMVVTGIEHTTGPIAMRFPRGNGYGVPLMEEG-WEPLEIGKGEILRNGDDVLIIGYGTMVYPSMQAAEILSEHGIEATVINARFVKPLDTELIVPLAQKIGRVVTLEEGCVMGGFGSAVAEALLDADVV---VPVKRIGIPDVLVEHATPDESKAELGLTSRQIAERVL 623
BLAST of DY305882 vs. ExPASy Swiss-Prot
Match: DXS_CYAP7 (1-deoxy-D-xylulose-5-phosphate synthase OS=Cyanothece sp. (strain PCC 7424) GN=dxs PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 4.960e-36 Identity = 84/207 (40.58%), Postives = 119/207 (57.49%), Query Frame = 3 Query: 6 GAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPKEALLI 623 G +DI ++ C+PN+V+MAP DEAEL M+ T D P R+PRGNG+G L L IGKG IL GD + +LGYG++V + A +L I TV +ARF KPLDTDLI LA + ++T+EEG +GGFGS V L +L + ++ +PD+ +DH P + + GL+S I+ VL + +E +I Sbjct: 432 GMYDIAYLRCIPNLVIMAPKDEAELQRMIVTGVNYTDGPIAMRYPRGNGLGVPLMEEG-WEALPIGKGEILRNGDDLLLLGYGTMVNTAMQVAEILGEHGIEATVVNARFVKPLDTDLIVPLAKQTGKVVTLEEGCLMGGFGSAVAEALLDHNVL---VPVKRFGVPDQLVDHAKPDESFADLGLTSSQIADEVLKSFFKTQEPSVI 634
BLAST of DY305882 vs. ExPASy Swiss-Prot
Match: DXS_SYNJB (1-deoxy-D-xylulose-5-phosphate synthase OS=Synechococcus sp. GN=dxs PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 6.478e-36 Identity = 84/194 (43.30%), Postives = 115/194 (59.28%), Query Frame = 3 Query: 6 GAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 584 G +DI ++ C+P MV+MAP DEAEL MV T P R+PRG+G+G L PL IGK +L G V IL YGS+V + AA +LK IS TV +ARF KPLDT+LI LA + +++TVEEG +GGFGS V L + D + L + +PD +++H +P + L E GL+S I+ + Sbjct: 438 GMYDIAYLRCIPEMVLMAPKDEAELQRMVVTGIQYTQGPIAMRYPRGSGVGVPLAEEG-WEPLPIGKAEVLRSGGEVLILAYGSMVHPSLQAAEILKEHGISATVVNARFAKPLDTELILPLAEQSRLVVTVEEGCLMGGFGSAVAEALLDA---DLAVPLLRLGVPDVWVEHATPEESLAELGLNSAGIAERI 627
BLAST of DY305882 vs. ExPASy Swiss-Prot
Match: DXS_VIBPA (1-deoxy-D-xylulose-5-phosphate synthase OS=Vibrio parahaemolyticus GN=dxs PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.443e-35 Identity = 85/200 (42.50%), Postives = 127/200 (63.50%), Query Frame = 3 Query: 6 GAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 602 GAFD++FM C+PNMV+MAPSDE E M+ T PS R+PRG+G+G + + T LEIGKGR++ +G++VAIL +G+ + + AA ++++ TVAD RF KPLD LIRQLA+EH++L+T+EE ++ GG G+ V F+ I+ L L LPD++I G+ + EE GL ++ I ++ L + Sbjct: 433 GAFDLSFMRCIPNMVIMAPSDENECRQMLYTGHK-HTGPSAVRYPRGSGMGTEI--EKEFTALEIGKGRVVRKGEKVAILSFGTFLPNALEAA-----KNLNATVADMRFVKPLDEALIRQLADEHDVLVTLEENAIAGGAGAGVIEFMMKEKIIKPVLNLG---LPDKFIHQGTQEELHEELGLDAKGIEKSIAEYLAK 621
BLAST of DY305882 vs. ExPASy Swiss-Prot
Match: DXS_ALHEH (1-deoxy-D-xylulose-5-phosphate synthase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=dxs PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 4.199e-35 Identity = 85/185 (45.95%), Postives = 120/185 (64.86%), Query Frame = 3 Query: 6 GAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGL 557 G+FD++++ C+PNM + APSDEAE +++T D P R+PRG+G GA LP + PL IGKG G R+A+L +G++V + A L +TVAD RF +PLD LIR+LA+ H++L+TVEE +V GG GS V +L +G LD P +R + LPDR++DHG+PA+ L E GL Sbjct: 433 GSFDLSYLRCVPNMTIAAPSDEAECWRLLSTG-YHHDGPFAVRYPRGSGPGAALPEADLD-PLAIGKGVCRRRGRRIAVLAFGTLVVPALAVAEAL-----DLTVADMRFVRPLDEALIRELADTHDLLVTVEENAVAGGAGSGVSEYLARAG-LDVP--VRHLGLPDRFVDHGTPAELLAEVGL 607
BLAST of DY305882 vs. ExPASy Swiss-Prot
Match: DXS_SYNJA (1-deoxy-D-xylulose-5-phosphate synthase OS=Synechococcus sp. (strain JA-3-3Ab) GN=dxs PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 7.162e-35 Identity = 87/206 (42.23%), Postives = 119/206 (57.77%), Query Frame = 3 Query: 6 GAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGILDGPLK--LRSMVLPDRYIDHGSPADQLEESGLSS----RHISATVLSLLGR 602 G +DI ++ C+P MV+MAP DEAEL MV T P R+PRG G+G L P+ IGK +L G V IL YGS+V + AA +LK IS TV +ARF KPLDT+LI LA + +++TVEEG +GGFGS V +LD ++ L + +PD +++H +P + L E GL+S I A V +L G+ Sbjct: 438 GMYDIAYLRCIPEMVLMAPKDEAELQRMVVTGIQYTKGPIAMRYPRGAGVGVPLAEEG-WEPIPIGKAEVLRSGGEVLILAYGSMVHPSLQAAEILKEHGISTTVVNARFAKPLDTELILPLAQQSRLVVTVEEGCLMGGFGSAVG-----EALLDADIRVPLLRLGVPDVWVEHATPEESLAELGLNSVGIAERIRAKVEALQGQ 637 The following BLAST results are available for this feature:
BLAST of DY305882 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305882 ID=DY305882; Name=DY305882; organism=Citrus sinensis; type=EST; length=883bpback to top |