DY305876

Overview
NameDY305876
Unique NameDY305876
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1264
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305876 vs. ExPASy Swiss-Prot
Match: KUP_YERPE (Low affinity potassium transport system protein kup OS=Yersinia pestis GN=kup PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 3.261e-32
Identity = 80/258 (31.01%), Postives = 130/258 (50.39%), Query Frame = 2
Query:    2 TVTYPALILAYMGQASFLRKHSELVSETFYKSIPHSLYWPMFXXXXXXXXXXXXXXXXGTFSIVQQSISLGCFPRVKVVHTSAKYEGQVYIPEINYLLMIACVCVTVGFRTTEKIGNAYGIAVVFVMTLTSTLLVLIMIMIWKSNIFLVIAYVLVIMSVELGYLSSVLYKFDQGGYLPLAFAAVLMTIMYIWN----NVYRRKYYFELEHKISPERVKEIAAETKFCRIPGLAMFYSKLVQGIPPIFQHYVENVPALH 763
            TV  P+L+L Y GQ + L K+ E +   F+   P     P+                 G FS+ +Q++ LG  P ++++HTS    GQ+YIP IN+ L +A V V +GF  +  +  AYGIAV   M +TS L   +    W  N FLV+  ++V++ +++   S+ + K   GG+LPL+   V+  IM  W     ++ RR +    EH  S E +     ++   R+PG A++ S+ +  IP    H +++   LH
Sbjct:  249 TVVLPSLVLNYFGQGALLLKNPEAIKNPFFLLAPDWALIPLLILATLATVIASQAVISGVFSLTRQAVRLGYLPPMRIIHTSEMESGQIYIPVINWTLYLAVVLVIIGFERSSNLAAAYGIAVTGTMVITSILFCTVAWKNWHWNRFLVVFLLMVLLIIDIPMFSANVLKLFSGGWLPLSLGLVMFIIMTTWKSERFSLLRRMH----EHSNSLEAMIASLEKSPPVRVPGTAVYMSRAMNVIPFALLHNLKHNKVLH 502          
BLAST of DY305876 vs. ExPASy Swiss-Prot
Match: KUP_YERPA (Low affinity potassium transport system protein kup OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=kup PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 3.261e-32
Identity = 80/258 (31.01%), Postives = 130/258 (50.39%), Query Frame = 2
Query:    2 TVTYPALILAYMGQASFLRKHSELVSETFYKSIPHSLYWPMFXXXXXXXXXXXXXXXXGTFSIVQQSISLGCFPRVKVVHTSAKYEGQVYIPEINYLLMIACVCVTVGFRTTEKIGNAYGIAVVFVMTLTSTLLVLIMIMIWKSNIFLVIAYVLVIMSVELGYLSSVLYKFDQGGYLPLAFAAVLMTIMYIWN----NVYRRKYYFELEHKISPERVKEIAAETKFCRIPGLAMFYSKLVQGIPPIFQHYVENVPALH 763
            TV  P+L+L Y GQ + L K+ E +   F+   P     P+                 G FS+ +Q++ LG  P ++++HTS    GQ+YIP IN+ L +A V V +GF  +  +  AYGIAV   M +TS L   +    W  N FLV+  ++V++ +++   S+ + K   GG+LPL+   V+  IM  W     ++ RR +    EH  S E +     ++   R+PG A++ S+ +  IP    H +++   LH
Sbjct:  249 TVVLPSLVLNYFGQGALLLKNPEAIKNPFFLLAPDWALIPLLILATLATVIASQAVISGVFSLTRQAVRLGYLPPMRIIHTSEMESGQIYIPVINWTLYLAVVLVIIGFERSSNLAAAYGIAVTGTMVITSILFCTVAWKNWHWNRFLVVFLLMVLLIIDIPMFSANVLKLFSGGWLPLSLGLVMFIIMTTWKSERFSLLRRMH----EHSNSLEAMIASLEKSPPVRVPGTAVYMSRAMNVIPFALLHNLKHNKVLH 502          
BLAST of DY305876 vs. ExPASy Swiss-Prot
Match: KUP2_DECAR (Probable potassium transport system protein kup 2 OS=Dechloromonas aromatica (strain RCB) GN=kup2 PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 7.264e-32
Identity = 75/257 (29.18%), Postives = 124/257 (48.25%), Query Frame = 2
Query:   14 PALILAYMGQASFLRKHSELVSETFYKSIPHSLYWPMFXXXXXXXXXXXXXXXXGTFSIVQQSISLGCFPRVKVVHTSAKYEGQVYIPEINYLLMIACVCVTVGFRTTEKIGNAYGIAVVFVMTLTSTLLVLIMIMIWKSNIFLVIAYVLVIMSVELGYLSSVLYKFDQGGYLPLAFAAVLMTIMYIWNNVYRRKYYFELEHKISPERVKEIAAETKFC-------RIPGLAMFYSKLVQGIPPIFQHYVENVPALH 763
            PAL+L Y GQ + L    E ++  F+   P     PM                 G FS+ +QSI +G  PR++++HTS   EGQ+Y+P  N+ L +A + + +GF+ +  +  AYGIAV   M + + L+  +M+++WK N  LV      ++ V++ + ++   K  +GG+ PLA   V  T++  W    R          +S E  K+    + F        RI G A+F +    G+PP   H +++   LH
Sbjct:  254 PALVLNYFGQGALLLIEPEAIASPFFHLAPDWALIPMVGLATAATVIASQAVISGAFSVARQSIQMGLLPRMQIIHTSGMEEGQIYVPFTNWSLYLAVIALVIGFKNSSNLAAAYGIAVTGTMLIDTILVAFVMVLMWKWNKLLVALVAGTLLLVDIAFFAANAIKIPEGGWFPLAMGLVSFTVLTTWRRGRR---------MVSEEMAKQSIPMSDFLQSIDDVHRIYGTAIFMTSAKDGVPPALLHNLKHNQVLH 501          
BLAST of DY305876 vs. ExPASy Swiss-Prot
Match: KUP_YERPY (Low affinity potassium transport system protein kup OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=kup PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 9.487e-32
Identity = 80/258 (31.01%), Postives = 129/258 (50.00%), Query Frame = 2
Query:    2 TVTYPALILAYMGQASFLRKHSELVSETFYKSIPHSLYWPMFXXXXXXXXXXXXXXXXGTFSIVQQSISLGCFPRVKVVHTSAKYEGQVYIPEINYLLMIACVCVTVGFRTTEKIGNAYGIAVVFVMTLTSTLLVLIMIMIWKSNIFLVIAYVLVIMSVELGYLSSVLYKFDQGGYLPLAFAAVLMTIMYIWN----NVYRRKYYFELEHKISPERVKEIAAETKFCRIPGLAMFYSKLVQGIPPIFQHYVENVPALH 763
            TV  P+L+L Y GQ + L K+ E +   F+   P     P+                 G FS+ +Q++ LG  P ++++HTS    GQ+YIP IN+ L +A V V +GF  +  +  AYGIAV   M +TS L   +    W  N FLV   ++V++ +++   S+ + K   GG+LPL+   V+  IM  W     ++ RR +    EH  S E +     ++   R+PG A++ S+ +  IP    H +++   LH
Sbjct:  249 TVVLPSLVLNYFGQGALLLKNPEAIKNPFFLLAPDWALIPLLILATLATVIASQAVISGVFSLTRQAVRLGYLPPMRIIHTSEMESGQIYIPVINWTLYLAVVLVIIGFERSSNLAAAYGIAVTGTMVITSILFCTVAWKNWHWNRFLVAFLLMVLLIIDIPMFSANVLKLFSGGWLPLSLGLVMFIIMTTWKSERFSLLRRMH----EHSNSLEAMIASLEKSPPVRVPGTAVYMSRAMNVIPFALLHNLKHNKVLH 502          
BLAST of DY305876 vs. ExPASy Swiss-Prot
Match: KUP_YERPS (Low affinity potassium transport system protein kup OS=Yersinia pseudotuberculosis GN=kup PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 9.487e-32
Identity = 80/258 (31.01%), Postives = 129/258 (50.00%), Query Frame = 2
Query:    2 TVTYPALILAYMGQASFLRKHSELVSETFYKSIPHSLYWPMFXXXXXXXXXXXXXXXXGTFSIVQQSISLGCFPRVKVVHTSAKYEGQVYIPEINYLLMIACVCVTVGFRTTEKIGNAYGIAVVFVMTLTSTLLVLIMIMIWKSNIFLVIAYVLVIMSVELGYLSSVLYKFDQGGYLPLAFAAVLMTIMYIWN----NVYRRKYYFELEHKISPERVKEIAAETKFCRIPGLAMFYSKLVQGIPPIFQHYVENVPALH 763
            TV  P+L+L Y GQ + L K+ E +   F+   P     P+                 G FS+ +Q++ LG  P ++++HTS    GQ+YIP IN+ L +A V V +GF  +  +  AYGIAV   M +TS L   +    W  N FLV   ++V++ +++   S+ + K   GG+LPL+   V+  IM  W     ++ RR +    EH  S E +     ++   R+PG A++ S+ +  IP    H +++   LH
Sbjct:  249 TVVLPSLVLNYFGQGALLLKNPEAIKNPFFLLAPDWALIPLLILATLATVIASQAVISGVFSLTRQAVRLGYLPPMRIIHTSEMESGQIYIPVINWTLYLAVVLVIIGFERSSNLAAAYGIAVTGTMVITSILFCTVAWKNWHWNRFLVAFLLMVLLIIDIPMFSANVLKLFSGGWLPLSLGLVMFIIMTTWKSERFSLLRRMH----EHSNSLEAMIASLEKSPPVRVPGTAVYMSRAMNVIPFALLHNLKHNKVLH 502          
BLAST of DY305876 vs. ExPASy Swiss-Prot
Match: KUP_YERPB (Low affinity potassium transport system protein kup OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=kup PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 9.487e-32
Identity = 80/258 (31.01%), Postives = 129/258 (50.00%), Query Frame = 2
Query:    2 TVTYPALILAYMGQASFLRKHSELVSETFYKSIPHSLYWPMFXXXXXXXXXXXXXXXXGTFSIVQQSISLGCFPRVKVVHTSAKYEGQVYIPEINYLLMIACVCVTVGFRTTEKIGNAYGIAVVFVMTLTSTLLVLIMIMIWKSNIFLVIAYVLVIMSVELGYLSSVLYKFDQGGYLPLAFAAVLMTIMYIWN----NVYRRKYYFELEHKISPERVKEIAAETKFCRIPGLAMFYSKLVQGIPPIFQHYVENVPALH 763
            TV  P+L+L Y GQ + L K+ E +   F+   P     P+                 G FS+ +Q++ LG  P ++++HTS    GQ+YIP IN+ L +A V V +GF  +  +  AYGIAV   M +TS L   +    W  N FLV   ++V++ +++   S+ + K   GG+LPL+   V+  IM  W     ++ RR +    EH  S E +     ++   R+PG A++ S+ +  IP    H +++   LH
Sbjct:  249 TVVLPSLVLNYFGQGALLLKNPEAIKNPFFLLAPDWALIPLLILATLATVIASQAVISGVFSLTRQAVRLGYLPPMRIIHTSEMESGQIYIPVINWTLYLAVVLVIIGFERSSNLAAAYGIAVTGTMVITSILFCTVAWKNWHWNRFLVAFLLMVLLIIDIPMFSANVLKLFSGGWLPLSLGLVMFIIMTTWKSERFSLLRRMH----EHSNSLEAMIASLEKSPPVRVPGTAVYMSRAMNVIPFALLHNLKHNKVLH 502          
BLAST of DY305876 vs. ExPASy Swiss-Prot
Match: KUP_YERP3 (Low affinity potassium transport system protein kup OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=kup PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 9.487e-32
Identity = 80/258 (31.01%), Postives = 129/258 (50.00%), Query Frame = 2
Query:    2 TVTYPALILAYMGQASFLRKHSELVSETFYKSIPHSLYWPMFXXXXXXXXXXXXXXXXGTFSIVQQSISLGCFPRVKVVHTSAKYEGQVYIPEINYLLMIACVCVTVGFRTTEKIGNAYGIAVVFVMTLTSTLLVLIMIMIWKSNIFLVIAYVLVIMSVELGYLSSVLYKFDQGGYLPLAFAAVLMTIMYIWN----NVYRRKYYFELEHKISPERVKEIAAETKFCRIPGLAMFYSKLVQGIPPIFQHYVENVPALH 763
            TV  P+L+L Y GQ + L K+ E +   F+   P     P+                 G FS+ +Q++ LG  P ++++HTS    GQ+YIP IN+ L +A V V +GF  +  +  AYGIAV   M +TS L   +    W  N FLV   ++V++ +++   S+ + K   GG+LPL+   V+  IM  W     ++ RR +    EH  S E +     ++   R+PG A++ S+ +  IP    H +++   LH
Sbjct:  249 TVVLPSLVLNYFGQGALLLKNPEAIKNPFFLLAPDWALIPLLILATLATVIASQAVISGVFSLTRQAVRLGYLPPMRIIHTSEMESGQIYIPVINWTLYLAVVLVIIGFERSSNLAAAYGIAVTGTMVITSILFCTVAWKNWHWNRFLVAFLLMVLLIIDIPMFSANVLKLFSGGWLPLSLGLVMFIIMTTWKSERFSLLRRMH----EHSNSLEAMIASLEKSPPVRVPGTAVYMSRAMNVIPFALLHNLKHNKVLH 502          
BLAST of DY305876 vs. ExPASy Swiss-Prot
Match: KUP_HERAR (Probable potassium transport system protein kup OS=Herminiimonas arsenicoxydans GN=kup PE=3 SV=2)

HSP 1 Score: 137.502 bits (345), Expect = 1.618e-31
Identity = 81/255 (31.76%), Postives = 125/255 (49.02%), Query Frame = 2
Query:    5 VTYPALILAYMGQASFLRKHSELVSETFYKSIPHSLYWPMFXXXXXXXXXXXXXXXXGTFSIVQQSISLGCFPRVKVVHTSAKYEGQVYIPEINYLLMIACVCVTVGFRTTEKIGNAYGIAVVFVMTLTSTLLVLIMIMIWKSNIFLVIAYVLVIMSVELGYLSSVLYKFDQGGYLPLAFAAVLMTIMYIWNNVYRRKYYFE--LEHKISPERVKEIAAETKFCRIPGLAMFYSKLVQGIPPIFQHYVENVPALH 763
            + +PAL L Y+GQ + L  + E V+  FY+ +     +P+                 GTFS+ +Q+I+LG  PR+K+  TSA   GQ+YIP +N+L MI  V   +GF ++  +  AYGIAV   M +T+ L   ++   WK N+ L +A     + ++L   S+ + K   GG+ PL    VL T+M  W     R+  FE   +H I  E        +   R+PG A+F      G+P    H + +   LH
Sbjct:  253 IAFPALSLNYLGQGALLLLNPEAVTNPFYQQLGAWSIYPLVALSTMAAIIASQATISGTFSMTKQAIALGFLPRMKIEFTSASQIGQIYIPAVNWLQMIVVVLAVIGFGSSSNLAAAYGIAVTATMMVTTVLTFFVIRYRWKYNLILCVAATGFFLVIDLSLFSANMLKLFHGGWFPLLLGVVLFTLMLTWKR--GRELVFENLQKHAIPLEDFLASLFISPPTRVPGTAIFLRGESDGVPHAMLHNLSHNKVLH 505          
BLAST of DY305876 vs. ExPASy Swiss-Prot
Match: KUP_BURVG (Probable potassium transport system protein kup OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=kup PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.618e-31
Identity = 63/188 (33.51%), Postives = 106/188 (56.38%), Query Frame = 2
Query:   14 PALILAYMGQASFLRKHSELVSETFYKSIPHSLYWPMFXXXXXXXXXXXXXXXXGTFSIVQQSISLGCFPRVKVVHTSAKYEGQVYIPEINYLLMIACVCVTVGFRTTEKIGNAYGIAVVFVMTLTSTLLVLIMIMIWKSNIFLVIAYVLVIMSVELGYLSSVLYKFDQGGYLPLAFAAVLMTIMYIW 577
            P+L+L Y GQ + L ++ + +   F+   P     P+                 G +S+  Q+I LG  PR+KV+HTS    GQ+Y+P +N+LL+   +C+ +GF++++ +  AYGIAV   M +T+ L  ++M+ +W  N  LV A + V ++V+LG+  + L K  QGG+LPL   A+L  ++  W
Sbjct:  267 PSLVLNYFGQGALLMQNPKAIENPFFLMAPEWALLPLVVLSTVATVIASQAVISGAYSLTSQAIQLGYVPRMKVLHTSELAIGQIYVPVVNWLLLAVILCIVIGFKSSDNLAAAYGIAVTATMVITTVLAAVVMVRVWNWNRLLVGAIIAVFLAVDLGFFGANLLKVAQGGWLPLGIGALLFFLLMTW 454          
BLAST of DY305876 vs. ExPASy Swiss-Prot
Match: KUP4_BRASB (Probable potassium transport system protein kup 4 OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=kup4 PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.618e-31
Identity = 73/253 (28.85%), Postives = 132/253 (52.17%), Query Frame = 2
Query:    5 VTYPALILAYMGQASFLRKHSELVSETFYKSIPHSLYWPMFXXXXXXXXXXXXXXXXGTFSIVQQSISLGCFPRVKVVHTSAKYEGQVYIPEINYLLMIACVCVTVGFRTTEKIGNAYGIAVVFVMTLTSTLLVLIMIMIWKSNIFLVIAYVLVIMSVELGYLSSVLYKFDQGGYLPLAFAAVLMTIMYIWNNVYRRKYYFELEHKISPERVKEIAAETKFCRIPGLAMFYSKLVQGIPPIFQHYVENVPALH 763
            +  P+L+L+Y GQ + L +   +    F++  P    +P+                 G+FS+ +Q++ LG  P   +  TS K  GQ+Y+P +N+++M+A + +T+ F +++++  AYG AV   M LT+ LL   M   W+  + + I    + + V++G+  + L K  +GG+LPL F A++  +M  W +          +   +PER     A  K  R+PG A+F ++  Q IPP+   +V+++ ALH
Sbjct:  268 IVLPSLLLSYAGQTALLIQKGTIEGNPFFQLCPTWGVYPLVFLAMIATIIASQSIITGSFSMTRQAMQLGWLPGFHIRQTSDKVYGQIYVPVVNWMMMVATIGITIAFGSSDRLAGAYGTAVSTTMLLTTCLLFTAMRKTWRWPLAVSILIAGLFLIVDVGFFGANLLKIAEGGWLPLTFGALVFFLMLTWRSGIDAVRESLAQASEAPERFVADLAAGKVPRVPGTAIFLTRTYQKIPPLLIDHVKHMGALH 520          
The following BLAST results are available for this feature:
BLAST of DY305876 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 343
Match NameE-valueIdentityDescription
KUP_YERPE3.261e-3231.01Low affinity potassium transport system protein ku... [more]
KUP_YERPA3.261e-3231.01Low affinity potassium transport system protein ku... [more]
KUP2_DECAR7.264e-3229.18Probable potassium transport system protein kup 2 ... [more]
KUP_YERPY9.487e-3231.01Low affinity potassium transport system protein ku... [more]
KUP_YERPS9.487e-3231.01Low affinity potassium transport system protein ku... [more]
KUP_YERPB9.487e-3231.01Low affinity potassium transport system protein ku... [more]
KUP_YERP39.487e-3231.01Low affinity potassium transport system protein ku... [more]
KUP_HERAR1.618e-3131.76Probable potassium transport system protein kup OS... [more]
KUP_BURVG1.618e-3133.51Probable potassium transport system protein kup OS... [more]
KUP4_BRASB1.618e-3128.85Probable potassium transport system protein kup 4 ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM2CH02RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305876 ID=DY305876; Name=DY305876; organism=Citrus sinensis; type=EST; length=1264bp
GACTGTGACTTATCCAGCTCTCATTTTGGCGTATATGGGACAAGCCTCCT
TCCTGCGCAAACACAGTGAACTCGTTAGCGAAACTTTCTACAAGTCCATT
CCACATAGTTTGTATTGGCCAATGTTTATTGTGGCCGTGATGGCAGCAAT
CATAGCAAGCCAAGCGATGATTTCAGGGACCTTCTCTATAGTCCAACAAT
CCATTTCATTGGGCTGTTTCCCTCGCGTCAAAGTCGTGCACACATCTGCT
AAGTATGAAGGCCAAGTTTACATTCCTGAAATCAATTACTTGCTTATGAT
AGCTTGCGTTTGCGTTACTGTCGGTTTCAGGACCACTGAAAAAATTGGCA
ACGCATATGGGATTGCAGTCGTATTTGTGATGACACTGACGTCAACGTTG
CTAGTACTCATCATGATAATGATCTGGAAATCCAACATATTTTTGGTAAT
CGCTTACGTGCTTGTCATCATGTCAGTGGAGTTGGGGTATTTAAGTTCAG
TCCTGTACAAATTTGACCAAGGTGGGTACTTACCATTAGCATTTGCCGCG
GTTCTAATGACCATCATGTACATCTGGAATAATGTGTACCGGAGAAAGTA
CTATTTCGAGCTTGAGCACAAGATTTCTCCAGAGAGAGTCAAAGAGATTG
CTGCTGAAACAAAATTTTGTCGAATCCCTGGCCTCGCGATGTTCTACTCC
AAGCTTGTTCAGGGTATCCCACCTATCTTCCAGCATTATGTGGAAAATGT
GCCTGCATTGCACTCGGTTTCTTGTTTTCGTCTCCATCAATTCTTTTGCC
ATCCGTAAAGGTGCCCGCAAAAGAACCATTTCTTTTCCGAAAAGTGGAAC
CCAAAAAACTAAATTTGTTCCAATTTTTTGCCAGAATACGGGTAACCGAA
ATCCACCCAATGAAGGAGGAACCCTTTGTGAAAAATGTTTATTGTAAAAA
TTGGGGGGATTGTTAGAAGATAGGATGAATGGCCGATGCCAACCCCCCCA
TCACATAACTGGGGGATTCCCGAAAGGTTGTCTATAGCGGAAAAATCGGT
TGAAAGGAAGAAAACAAATCCGGCCTGGTAAAAAACAGGTAAAATGTGCC
ACACCAAAGAAAAGAAAAAGAAAAGAAGGAAAAAAGGTTGACGCGAAATG
TGATTTGGGAGAACCCGATCAAAGTTCAGGACCCGACCCCAGGCCCCACT
TGCCGCGTGTTTAGGCTTTTTTTATAGGCACGTCGTCGAAAATGCAGTAG
ACCAGCACGGGGGG
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