DY305865
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305865 vs. ExPASy Swiss-Prot
Match: SCL1_ARATH (Scarecrow-like protein 1 OS=Arabidopsis thaliana GN=SCL1 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.055e-19 Identity = 52/189 (27.51%), Postives = 95/189 (50.26%), Query Frame = -3 Query: 417 KWETIQNGGLELDPDEVLA*NFCSGF*NFLDETGDVNCPRNSVLKLIRKIKPDIFVNSIVNGSYNAPFFVTRFREAIFHFSSLFDMFDTTIPREDPERLMFEREVYGREAMNVIACEGLERVERPETYKQWQARTIRAGFKQLPLNQELMEKLMGKLKAWYHKDFVIDQDNNWMLQGWKGRIVFASSCW 983 K + L P E L NF + DE+ R+ +L +++ + P + + + N F RF EA ++S++F+ D T+PRE ER+ ER+ R+ +N++ACEG ER+ER E +W+AR + AGF P++ ++ + +K Y + + ++ + W+ + + +S W Sbjct: 404 KTSIVSPSTLGCKPGETLIVNFAFQLHHMPDESVTTVNQRDELLHMVKSLNPKLVTVVEQDVNTNTSPFFPRFIEAYEYYSAVFESLDMTLPRESQERMNVERQCLARDIVNIVACEGEERIERYEAAGKWRARMMMAGFNPKPMSAKVTNNIQNLIKQQYCNKYKLKEEMGELHFCWEEKSLIVASAW 592
BLAST of DY305865 vs. ExPASy Swiss-Prot
Match: SCL5_ARATH (Scarecrow-like protein 5 OS=Arabidopsis thaliana GN=SCL5 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.378e-19 Identity = 53/174 (30.46%), Postives = 94/174 (54.02%), Query Frame = -3 Query: 417 EVLA*NFCSGF*NFLDETGDVNCPRNSVLKLIRKIKPDIFVNSIVNGSYNAPFFVTRFREAIFHFSSLFDMFDTTIPREDPERLMFEREVYGREAMNVIACEGLERVERPETYKQWQARTIRAGFKQLPLNQELMEKLMGKLKAWYHKDFVIDQDNNWMLQGWKGRIVFASSCW 938 E LA NF + DE+ V R+ +L+L++ + P++ + N F+ RF E + H+ ++F+ D + R+ ER+ E+ RE +N+IACEG+ER ER E +W++R AGFK PL+ + + G L++ Y + + +++ + + GWK + + S W Sbjct: 424 EALAVNFPLVLHHMPDESVTVENHRDRLLRLVKHLSPNVVTLVEQEANTNTAPFLPRFVETMNHYLAVFESIDVKLARDHKERINVEQHCLAREVVNLIACEGVEREERHEPLGKWRSRFHMAGFKPYPLSSYVNATIKGLLES-YSEKYTLEERDGALYLGWKNQPLITSCAW 596
BLAST of DY305865 vs. ExPASy Swiss-Prot
Match: SCL21_ARATH (Scarecrow-like protein 21 OS=Arabidopsis thaliana GN=SCL21 PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.800e-19 Identity = 50/180 (27.78%), Postives = 94/180 (52.22%), Query Frame = -3 Query: 417 LELDPDEVLA*NFCSGF*NFLDETGDVNCPRNSVLKLIRKIKPDIFVNSIVNGSYNAPFFVTRFREAIFHFSSLFDMFDTTIPREDPERLMFEREVYGREAMNVIACEGLERVERPETYKQWQARTIRAGFKQLPLNQELMEKLMGKLKAWYHKDFVIDQDNNWMLQGWKGRIVFASSCW 956 L++ E L NF + DE+ + R+ +L++++ + P + + N F+ RF E + +++++F+ D +PR ER+ E+ R+ +N+IACEG ER+ER E +W++R AGF+ PL+ + + L+ Y + I++ + + GW RI+ +S W Sbjct: 234 LDVRDGEALGVNFAYMLHHLPDESVSMENHRDRLLRMVKSLSPKVVTLVEQECNTNTSPFLPRFLETLSYYTAMFESIDVMLPRNHKERINIEQHCMARDVVNIIACEGAERIERHELLGKWKSRFSMAGFEPYPLSSIISATIRALLRD-YSNGYAIEERDGALYLGWMDRILVSSCAW 412
BLAST of DY305865 vs. ExPASy Swiss-Prot
Match: PAT1_ARATH (Scarecrow-like transcription factor PAT1 OS=Arabidopsis thaliana GN=PAT1 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 5.238e-19 Identity = 52/180 (28.89%), Postives = 93/180 (51.67%), Query Frame = -3 Query: 417 LELDPDEVLA*NFCSGF*NFLDETGDVNCPRNSVLKLIRKIKPDIFVNSIVNGSYNAPFFVTRFREAIFHFSSLFDMFDTTIPREDPERLMFEREVYGREAMNVIACEGLERVERPETYKQWQARTIRAGFKQLPLNQELMEKLMGKLKAWYHKDFVIDQDNNWMLQGWKGRIVFASSCW 956 L + P E LA NF + DE+ R+ +L++++ + P + + N F RF E + +++++F+ D T+PR+ +R+ E+ R+ +N+IACEG +RVER E +W++R AGF PL+ L+ + L Y + +++ + + GW R + AS W Sbjct: 311 LGVRPGEALAVNFAFVLHHMPDESVSTENHRDRLLRMVKSLSPKVVTLVEQESNTNTAAFFPRFMETMNYYAAMFESIDVTLPRDHKQRINVEQHCLARDVVNIIACEGADRVERHELLGKWRSRFGMAGFTPYPLS-PLVNSTIKSLLRNYSDKYRLEERDGALYLGWMHRDLVASCAW 489
BLAST of DY305865 vs. ExPASy Swiss-Prot
Match: GAI1_VITVI (DELLA protein GAI1 OS=Vitis vinifera GN=GAI1 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 2.874e-17 Identity = 61/184 (33.15%), Postives = 95/184 (51.63%), Query Frame = -3 Query: 417 LELDPDEVLA*NFCSGF*NFLDETGDVNCPRNSVLKLIRKIKPDIFVNSIVNGSYNAPFFVTRFREAIFHFSSLFDMFDT--TIPREDPERLMFEREVY-GREAMNVIACEGLERVERPETYKQWQARTIRAGFKQLPLNQELMEKLMGKLKAWYHKD-FVIDQDNNWMLQGWKGRIVFASSCW 956 LEL E +A N + L G + VL ++ +KPDI ++N P F+ RF E++ ++S+LFD + P ++LM EVY G++ NV+ACEG ERVER ET QW+AR AGF + L ++ L + D + ++++N ++ GW R + A+S W Sbjct: 397 LELRDGESVAVNSVFELHSLLARPGGIE----RVLSAVKDMKPDIVTIVEQEANHNGPVFLDRFTESLHYYSTLFDSLEGCGVSPVNTQDKLM--SEVYLGQQICNVVACEGPERVERHETLAQWRARLGSAGFDPVNLGSNAFKQASMLLALFAGGDGYRVEENNGCLMLGWHTRPLIATSAW 574
BLAST of DY305865 vs. ExPASy Swiss-Prot
Match: GAIP_CUCMA (DELLA protein GAIP OS=Cucurbita maxima GN=GAIP PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.863e-16 Identity = 46/150 (30.67%), Postives = 81/150 (54.00%), Query Frame = -3 Query: 411 VLKLIRKIKPDIFVNSIVNGSYNAPFFVTRFREAIFHFSSLFDMFDTTIPREDPERLMFEREVYGREAMNVIACEGLERVERPETYKQWQARTIRAGFKQLPLNQELMEKLMGKLKAW-YHKDFVIDQDNNWMLQGWKGRIVFASSCWVP 857 VL +++++KP+I ++N P FV RF E++ ++S+LFD + + +D M G++ NV+ACEG +RVER ET QW+ R AGF + L ++ L + + + ++++ ++ GW R + A+S W P Sbjct: 425 VLSVVKQMKPEIVTVVEQEANHNGPVFVERFTESLHYYSTLFDSLECSPNSQDK---MMSEMYLGKQICNVVACEGADRVERHETLTQWRTRLSSAGFDPIHLGSNAFKQASILLALFGSGEGYRVEENEGSLMLGWHTRPLIATSAWKP 571
BLAST of DY305865 vs. ExPASy Swiss-Prot
Match: RGA2_BRACM (DELLA protein RGA2 OS=Brassica campestris GN=RGA2 PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 7.079e-16 Identity = 60/185 (32.43%), Postives = 96/185 (51.89%), Query Frame = -3 Query: 417 LELDPDEV--LA*NFCSGF*NFLDETGDVNCPRNSVLKLIRKIKPDIFVNSIVNGSYNAPFFVTRFREAIFHFSSLFDMFDTTIPREDPERLMFEREVY-GREAMNVIACEGLERVERPETYKQWQARTIRAGFKQLPLNQELMEKLMGKLKAWYH--KDFVIDQDNNWMLQGWKGRIVFASSCW 956 LEL P E+ +A N L TG + VL ++++IKP IF S+N P F+ RF E++ ++S+LFD + +D ++M EVY G++ N++ACEG +RVER ET QW R +GF L K L A ++ + + ++++N ++ GW R + +S W Sbjct: 398 LELRPSEIEAVAVNSVFELHKLLGRTGGIE----KVLGVVKQIKPVIFTVVEQESSHNGPVFLDRFTESLHYYSTLFDSLEGVPSSQD--KVM--SEVYLGKQICNLVACEGPDRVERHETLSQWANRFGSSGFAPAHLGSNAF-KQASMLLALFNGGEGYRVEENNGCLMLGWHTRPLITTSAW 573
BLAST of DY305865 vs. ExPASy Swiss-Prot
Match: SCL3_ARATH (Scarecrow-like protein 3 OS=Arabidopsis thaliana GN=SCL3 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.577e-15 Identity = 42/149 (28.19%), Postives = 79/149 (53.02%), Query Frame = -3 Query: 417 NSVLKLIRKIKPDIFVNSIVNGSYNAPFFVTRFREAIFHFSSLFDMFDTTIPREDPERLMFEREVYGREAMNVIACEGLERVERPETYKQWQARTIRAGFKQLPLNQELMEKLMGKLKAWYHKDFVIDQDNNWMLQGWKGRIVFASSCW 863 +S L I + P + V + + +N + R E+++ +++LFD +T +PR +R+ E+ ++G E N+I+CEG ER ER E ++W R AGF +PL+ M + L+ + I +++ + W+ R +++ S W Sbjct: 330 DSFLNAIWGLSPKVMVVTEQDSDHNGSTLMERLLESLYTYAALFDCLETKVPRTSQDRIKVEKMLFGEEIKNIISCEGFERRERHEKLEKWSQRIDLAGFGNVPLSYYAMLQARRLLQGCGFDGYRIKEESGCAVICWQDRPLYSVSAW 478
BLAST of DY305865 vs. ExPASy Swiss-Prot
Match: RGL2_ARATH (DELLA protein RGL2 OS=Arabidopsis thaliana GN=RGL2 PE=1 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 2.060e-15 Identity = 48/149 (32.21%), Postives = 81/149 (54.36%), Query Frame = -3 Query: 417 VLKLIRKIKPDIFVNSIVNGSYNAPFFVTRFREAIFHFSSLFDMFDTTIPREDPERLMFEREVY-GREAMNVIACEGLERVERPETYKQWQARTIRAGFKQLPLNQELMEKLMGKLKAWYHKD-FVIDQDNNWMLQGWKGRIVFASSCW 857 +L ++ IKP I ++N F+ RF EA+ ++SSLFD + + +R+M EVY GR+ +NV+A EG +RVER ET QW+ R AGF + L ++ L + D + +++++ ++ GW+ R + +S W Sbjct: 398 LLNTVKAIKPSIVTVVEQEANHNGIVFLDRFNEALHYYSSLFDSLEDSYSLPSQDRVM--SEVYLGRQILNVVAAEGSDRVERHETAAQWRIRMKSAGFDPIHLGSSAFKQASMLLSLYATGDGYRVEENDGCLMIGWQTRPLITTSAW 544
BLAST of DY305865 vs. ExPASy Swiss-Prot
Match: GAI_ARATH (DELLA protein GAI OS=Arabidopsis thaliana GN=GAI PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.060e-15 Identity = 58/185 (31.35%), Postives = 98/185 (52.97%), Query Frame = -3 Query: 417 LELDPDEV--LA*NFCSGF*NFLDETGDVNCPRNSVLKLIRKIKPDIFVNSIVNGSYNAPFFVTRFREAIFHFSSLFDMFDTTIPREDPERLMFEREVY-GREAMNVIACEGLERVERPETYKQWQARTIRAGFKQLPLNQELMEKLMGKLKAWYH--KDFVIDQDNNWMLQGWKGRIVFASSCW 956 LEL P E+ +A N L G ++ VL ++ +IKP+IF ++N+P F+ RF E++ ++S+LFD + +D ++M EVY G++ NV+AC+G +RVER ET QW+ R AGF + K L A ++ + + +++ + ++ GW R + A+S W Sbjct: 353 LELRPSEIESVAVNSVFELHKLLGRPGAID----KVLGVVNQIKPEIFTVVEQESNHNSPIFLDRFTESLHYYSTLFDSLEGVPSGQD--KVM--SEVYLGKQICNVVACDGPDRVERHETLSQWRNRFGSAGFAAAHIGSNAF-KQASMLLALFNGGEGYRVEESDGCLMLGWHTRPLIATSAW 528 The following BLAST results are available for this feature:
BLAST of DY305865 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305865 ID=DY305865; Name=DY305865; organism=Citrus sinensis; type=EST; length=1240bpback to top |