DY305865
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305865 vs. ExPASy Swiss-Prot
Match: RGL1_ARATH (DELLA protein RGL1 OS=Arabidopsis thaliana GN=RGL1 PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 3.513e-15 Identity = 49/147 (33.33%), Postives = 82/147 (55.78%), Query Frame = -3 Query: 417 LKLIRKIKPDIFVNSIVNGSYNAPFFVTRFREAIFHFSSLFDMFDTTIPREDPERLMFEREVYGREAMNVIACEGLERVERPETYKQWQARTIRAGFKQLPLNQELMEKLMGKLKAWYHKD-FVIDQDNNWMLQGWKGRIVFASSCW 854 L I+ I+PDI ++N F+ RF E++ ++SSLFD + P +D R+M E + GR+ +N++ACEG +RVER ET QW+ R GFK + + ++ L + D + ++++ +L GW+ R + A+S W Sbjct: 363 LSTIKSIRPDIMTVVEQEANHNGTVFLDRFTESLHYYSSLFDSLEGP-PSQD--RVMSELFL-GRQILNLVACEGEDRVERHETLNQWRNRFGLGGFKPVSIGSNAYKQASMLLALYAGADGYNVEENEGCLLLGWQTRPLIATSAW 505
BLAST of DY305865 vs. ExPASy Swiss-Prot
Match: GAIPB_CUCMA (DELLA protein GAIP-B OS=Cucurbita maxima GN=GAIPB PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.022e-14 Identity = 41/148 (27.70%), Postives = 80/148 (54.05%), Query Frame = -3 Query: 417 VLKLIRKIKPDIFVNSIVNGSYNAPFFVTRFREAIFHFSSLFDMFDTTIPREDPERLMFEREVYGREAMNVIACEGLERVERPETYKQWQARTIRAGFKQLPLNQELMEKLMGKLKAW-YHKDFVIDQDNNWMLQGWKGRIVFASSCW 857 V+ +++++KP+I ++N P F+ RF E++ ++S+LFD +++ +D M G++ NV+ACEG +RVE ET QW+ R +GF+ + L ++ L + + + ++++N + GW R + +S W Sbjct: 432 VMSVVKQMKPEIMTVVEQEANHNGPVFMDRFTESLHYYSTLFDSLESSPNNQDK---MMSEMYLGKQICNVVACEGSDRVEWHETLTQWRTRLCSSGFEPIHLGSNAFKQASMLLALFGSGEGYRVEENNGSLTLGWHTRPLIVTSAW 576
BLAST of DY305865 vs. ExPASy Swiss-Prot
Match: GAI_SOLLC (DELLA protein GAI OS=Solanum lycopersicum GN=GAI PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.277e-14 Identity = 47/166 (28.31%), Postives = 83/166 (50.00%), Query Frame = -3 Query: 402 VLKLIRKIKPDIFVNSIVNGSYNAPFFVTRFREAIFHFSSLFDMFDTT-------------IPREDPERLMFEREVYGREAMNVIACEGLERVERPETYKQWQARTIRAGFKQLPLNQELMEKLMGKLKAWYHKD-FVIDQDNNWMLQGWKGRIVFASSCWVPAPE 857 VL I++I P I ++NA F+ RF EA+ ++S++FD +++ P + + L+ GR+ NV+ACEG +RVER ET QW+ R +GF + L ++ L + D + +++++ ++ GW R + A+S W P+ Sbjct: 413 VLNSIKQINPKIVTLVEQEANHNAGVFIDRFNEALHYYSTMFDSLESSGSSSSASPTGILPQPPVNNQDLVMSEVYLGRQICNVVACEGSDRVERHETLNQWRVRMNSSGFDPVHLGSNAFKQASMLLALFAGGDGYRVEENDGCLMLGWHTRPLIATSAWKLLPD 578
BLAST of DY305865 vs. ExPASy Swiss-Prot
Match: RGA1_BRACM (DELLA protein RGA1 OS=Brassica campestris GN=RGA1 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 3.885e-14 Identity = 57/185 (30.81%), Postives = 93/185 (50.27%), Query Frame = -3 Query: 417 LELDPDEV--LA*NFCSGF*NFLDETGDVNCPRNSVLKLIRKIKPDIFVNSIVNGSYNAPFFVTRFREAIFHFSSLFDMFDTTIPREDPERLMFEREVY-GREAMNVIACEGLERVERPETYKQWQARTIRAGFKQLPLNQELMEKLMGKLKAWYH--KDFVIDQDNNWMLQGWKGRIVFASSCW 956 LEL P E +A N L TG + V ++++IKP IF ++N P F+ RF E++ ++S+LFD + +D ++M EVY G++ N++ACEG +RVER ET QW R +GF L K L A ++ + + ++++N ++ W R + +S W Sbjct: 392 LELRPSETEAVAVNSVFELHKLLGRTGGIE----KVFGVVKQIKPVIFTVVEQESNHNGPVFLDRFTESLHYYSTLFDSLEGAPSSQD--KVM--SEVYLGKQICNLVACEGPDRVERHETLSQWSNRFGSSGFAPAHLGSNAF-KQASTLLALFNGGEGYRVEENNGCLMLSWHTRPLITTSAW 567
BLAST of DY305865 vs. ExPASy Swiss-Prot
Match: RGL3_ARATH (DELLA protein RGL3 OS=Arabidopsis thaliana GN=RGL3 PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 8.654e-14 Identity = 46/155 (29.68%), Postives = 84/155 (54.19%), Query Frame = -3 Query: 399 VLKLIRKIKPDIFVNSIVNGSYNAPFFVTRFREAIFHFSSLFDMFDTTIPREDPERLMFEREVY-GREAMNVIACEGLERVERPETYKQWQARTIRAGFKQLPLNQELMEKLMGKLKAWYHKD-FVIDQDNNWMLQGWKGRIVFASSCWVPAPEL 857 +L ++ +KP + ++N F+ RF EA+ ++SSLFD + + +R+M EVY GR+ +N++A EG +R+ER ET QW+ R AGF + L + ++ L D + +++++ ++ W+ + + A+S W A EL Sbjct: 369 LLATVKAVKPGLVTVVEQEANHNGDVFLDRFNEALHYYSSLFDSLEDGVVIPSQDRVM--SEVYLGRQILNLVATEGSDRIERHETLAQWRKRMGSAGFDPVNLGSDAFKQASLLLALSGGGDGYRVEENDGSLMLAWQTKPLIAASAWKLAAEL 521
BLAST of DY305865 vs. ExPASy Swiss-Prot
Match: RGA_ARATH (DELLA protein RGA OS=Arabidopsis thaliana GN=RGA PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.476e-13 Identity = 55/184 (29.89%), Postives = 91/184 (49.46%), Query Frame = -3 Query: 417 LELDPD--EVLA*NFCSGF*NFLDETGDVNCPRNSVLKLIRKIKPDIFVNSIVNGSYNAPFFVTRFREAIFHFSSLFDMFDTTIPREDPERLMFEREVY-GREAMNVIACEGLERVERPETYKQWQARTIRAGFKQLPLNQELMEKLMGKLKAWYH-KDFVIDQDNNWMLQGWKGRIVFASSCW 956 LEL P E +A N L G + VL ++++IKP IF ++N P F+ RF E++ ++S+LFD + +D ++M EVY G++ N++ACEG +RVER ET QW R +G L ++ L + + + +++ N ++ GW R + +S W Sbjct: 405 LELRPSDTEAVAVNSVFELHKLLGRPGGIE----KVLGVVKQIKPVIFTVVEQESNHNGPVFLDRFTESLHYYSTLFDSLEGVPNSQD--KVM--SEVYLGKQICNLVACEGPDRVERHETLSQWGNRFGSSGLAPAHLGSNAFKQASMLLSVFNSGQGYRVEESNGCLMLGWHTRPLITTSAW 580
BLAST of DY305865 vs. ExPASy Swiss-Prot
Match: SCL18_ARATH (Scarecrow-like protein 18 OS=Arabidopsis thaliana GN=SCL18 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 4.295e-13 Identity = 40/147 (27.21%), Postives = 74/147 (50.34%), Query Frame = -3 Query: 417 LKLIRKIKPDIFVNSIVNGSYNAPFFVTRFREAIFHFSSLFDMFDTTIPREDPERLMFEREVYGREAMNVIACEGLERVERPETYKQWQARTIRAGFKQLPLNQELMEKLMGKLKAWYHKD-FVIDQDNNWMLQGWKGRIVFASSCW 854 L I+ + I + ++ F+ RF EA+ H+ ++FD + T+P ERL E+ +G+E ++V+A E ER +R ++ W+ R GF +P+ + + L+ Y + + + NN + GW+ R +F+ S W Sbjct: 298 LSAIKSLNSRIVTMAEREANHGDHSFLNRFSEAVDHYMAIFDSLEATLPPNSRERLTLEQRWFGKEILDVVAAEETERKQRHRRFEIWEEMMKRFGFVNVPIGSFALSQAKLLLRLHYPSEGYNLQFLNNSLFLGWQNRPLFSVSSW 444
BLAST of DY305865 vs. ExPASy Swiss-Prot
Match: GAI_GOSHI (DELLA protein GAI OS=Gossypium hirsutum GN=GAI PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 4.295e-13 Identity = 43/144 (29.86%), Postives = 73/144 (50.69%), Query Frame = -3 Query: 429 VLKLIRKIKPDIFVNSIVNGSYNAPFFVTRFREAIFHFSSLFDMFDTTIPREDPERLMFEREVYGREAMNVIACEGLERVERPETYKQWQARTIRAGFKQLPLNQELMEKLMGKLKAWYHKD-FVIDQDNNWMLQGWKGRIVFA 857 V+ I+ +KP I ++N P F+ RF EA+ ++S+LFD + + + L GR+ NV+ACEG++RVER E QW+ R AG + L ++ L + D + ++++N ++ GW R + A Sbjct: 385 VVSSIKAMKPKIVTVVEQEANHNGPVFLDRFTEALHYYSTLFDSLEGSGVAPASQDLAMSELYLGRQICNVVACEGMDRVERHEPLTQWRTRMETAGVSPVHLGSNAYKQASMLLALFASGDGYRVEENNGCLMLGWHTRPLIA 528
BLAST of DY305865 vs. ExPASy Swiss-Prot
Match: RHT1_WHEAT (DELLA protein RHT-1 OS=Triticum aestivum GN=RHT1 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.382e-11 Identity = 55/198 (27.78%), Postives = 89/198 (44.95%), Query Frame = -3 Query: 417 ELDPDE---VLA*NFCSGF*NFLDETGDVNCPRNSVLKLIRKIKPDIFVNSIVNGSYNAPFFVTRFREAIFHFSSLFDMFDTTIPREDPERL--------------MFEREVY-GREAMNVIACEGLERVERPETYKQWQARTIRAGFKQLPLNQELMEKLMGKLKAWYHKD-FVIDQDNNWMLQGWKGRIVFASSCW 953 E DP+E V+A N L + G + VL +R ++P I ++N+ F+ RF E++ ++S++FD + P + EVY GR+ NV+ACEG ER ER ET QW+ R AGF+ + L ++ L + D + +++ + GW R + A+S W Sbjct: 425 EEDPNEEPEVIAVNSVFEMHRLLAQPGALE----KVLGTVRAVRPRIVTVVEQEANHNSGTFLDRFTESLHYYSTMFDSLEGGSSGGGPSEVSSGAAAAPAAAGTDQVMSEVYLGRQICNVVACEGAERTERHETLGQWRNRLGNAGFETVHLGSNAYKQASTLLALFAGGDGYKVEEKEGCLTLGWHTRPLIATSAW 618
BLAST of DY305865 vs. ExPASy Swiss-Prot
Match: SCL4_ARATH (Scarecrow-like protein 4 OS=Arabidopsis thaliana GN=SCL4 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 2.357e-11 Identity = 49/191 (25.65%), Postives = 87/191 (45.55%), Query Frame = -3 Query: 417 IQNGGLELDPDEVLA*NFCSGF*NFLDETGDVNCPRNSVLKLIRKIKPDIFVNSIVNGSYNAPFFVTRFREAIFHFSSLFDMFDTTIPREDPERLMFEREVYGREAMNVIACE--GLERVERPETYKQWQARTIRAGFKQLPLNQELMEKLMGKLKAWYHK----DFVIDQDNNWMLQGWKGRIVFASSCW 971 + +DPDEVLA NF LDET + ++ L+L + + P + S N F R + A+ +S++F+ + + R+ ER+ ERE++GR +I E G+ R ER E +QW+ AGF+ + L+ + + K+ W + +++ ++ W + S W Sbjct: 399 LNGSSFRVDPDEVLAVNFMLQLYKLLDETPTIV---DTALRLAKSLNPRVVTLGEYEVSLNRVGFANRVKNALQFYSAVFESLEPNLGRDSEERVRVERELFGRRISGLIGPEKTGIHR-ERMEEKEQWRVLMENAGFESVKLSNYAVSQ--AKILLWNYNYSNLYSIVESKPGFISLAWNDLPLLTLSSW 583 The following BLAST results are available for this feature:
BLAST of DY305865 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305865 ID=DY305865; Name=DY305865; organism=Citrus sinensis; type=EST; length=1240bpback to top |