DY305865
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305865 vs. ExPASy Swiss-Prot
Match: SLN1_HORVU (DELLA protein SLN1 OS=Hordeum vulgare GN=SLN1 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.078e-11 Identity = 55/197 (27.92%), Postives = 88/197 (44.67%), Query Frame = -3 Query: 417 ELDPDE---VLA*NFCSGF*NFLDETGDVNCPRNSVLKLIRKIKPDIFVNSIVNGSYNAPFFVTRFREAIFHFSSLFDMFDT-------------TIPREDPERLMFEREVY-GREAMNVIACEGLERVERPETYKQWQARTIRAGFKQLPLNQELMEKLMGKLKAWYHKD-FVIDQDNNWMLQGWKGRIVFASSCW 953 E DP+E V+A N L + G + VL +R ++P I ++N+ F+ RF E++ ++S++FD + P EVY GR+ NV+ACEG ER ER ET QW+ R AGF+ + L ++ L + D + +++ + GW R + A+S W Sbjct: 421 EEDPNEEPEVIAVNSVFEMHRLLAQPGALE----KVLGTVRAVRPRIVTVVEQEANHNSGSFLDRFTESLHYYSTMFDSLEGGSSGGPSEVSSGGAAPAAAAGTDQVMSEVYLGRQICNVVACEGTERTERHETLGQWRNRLGNAGFETVHLGSNAYKQASTLLALFAGGDGYKVEEKEGCLTLGWHTRPLIATSAW 613
BLAST of DY305865 vs. ExPASy Swiss-Prot
Match: DWRF8_MAIZE (DELLA protein DWARF8 OS=Zea mays GN=D8 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.078e-11 Identity = 52/189 (27.51%), Postives = 86/189 (45.50%), Query Frame = -3 Query: 417 DPDEVLA*NFCSGF*NFLDETGDVNCPRNSVLKLIRKIKPDIFVNSIVNGSYNAPFFVTRFREAIFHFSSLFDMFD----------TTIPREDPERLMFEREVY-GREAMNVIACEGLERVERPETYKQWQARTIRAGFKQLPLNQELMEKLMGKLKAWYHKD-FVIDQDNNWMLQGWKGRIVFASSCW 947 D EV+A N L + G + VL +R ++P I ++N+ F+ RF E++ ++S++FD + P EVY GR+ NV+ACEG ER ER ET QW++R +GF + L ++ L + D + +++ + + GW R + A+S W Sbjct: 438 DEPEVIAVNSVFELHRLLAQPGALE----KVLGTVRAVRPRIVTVVEQEANHNSGTFLDRFTESLHYYSTMFDSLEGAGAGSGQSTDASPAAAGGTDQVMSEVYLGRQICNVVACEGAERTERHETLGQWRSRLGGSGFAPVHLGSNAYKQASTLLALFAGGDGYRVEEKDGCLTLGWHTRPLIATSAW 622
BLAST of DY305865 vs. ExPASy Swiss-Prot
Match: SHR_ARATH (Protein SHORT-ROOT OS=Arabidopsis thaliana GN=SHR PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 4.020e-11 Identity = 54/191 (28.27%), Postives = 93/191 (48.69%), Query Frame = -3 Query: 411 LELDPDEVLA*NFCSGF*NFLDETGDVNCPRNSVLKLIRKIKPDIFV----NSIVNGSYNAPF---FVTRFREAIFHFSSLFDMFDTTIPREDPERLMFEREVYGREAMNVIACEGLERVERPETYKQWQARTIRAGFKQLPLNQELMEKLMGKLKAWYHKDFVIDQ--DNNWMLQGWKGRIVFASSCWVP 956 L++ PDEVLA N C G + + G PR++V+ R+++P I + + G F F+ F E + F F+ ++ + PR ERLM ER GR ++++ACE + ER ET ++W R +GF + + E+ + + L+ + + + Q D + W+ + V +S W P Sbjct: 345 LDVKPDEVLAIN-CVGAMHGIASRGS---PRDAVISSFRRLRPRIVTVVEEEADLVGEEEGGFDDEFLRGFGECLRWFRVCFESWEESFPRTSNERLMLERAA-GRAIVDLVACEPSDSTERRETARKWSRRMRNSGFGAVGYSDEVADDVRALLRRYKEGVWSMVQCPDAAGIFLCWRDQPVVWASAWRP 530
BLAST of DY305865 vs. ExPASy Swiss-Prot
Match: SLR1_ORYSJ (DELLA protein SLR1 OS=Oryza sativa subsp. japonica GN=SLR1 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 6.857e-11 Identity = 46/161 (28.57%), Postives = 79/161 (49.07%), Query Frame = -3 Query: 417 VLKLIRKIKPDIFVNSIVNGSYNAPFFVTRFREAIFHFSSLFDMFDTTIPRE------------DPERLMFEREVY-GREAMNVIACEGLERVERPETYKQWQARTIRAGFKQLPLNQELMEKLMGKLKAWYHKD-FVIDQDNNWMLQGWKGRIVFASSCW 857 VL + ++P I ++N+ F+ RF E++ ++S++FD + + +++M EVY GR+ NV+ACEG ER ER ET QW+ R RAGF+ + L ++ L + D + +++ + GW R + A+S W Sbjct: 462 VLGTVHAVRPRIVTVVEQEANHNSGSFLDRFTESLHYYSTMFDSLEGGSSGQAELSPPAAGGGGGTDQVM--SEVYLGRQICNVVACEGAERTERHETLGQWRNRLGRAGFEPVHLGSNAYKQASTLLALFAGGDGYRVEEKEGCLTLGWHTRPLIATSAW 620 The following BLAST results are available for this feature:
BLAST of DY305865 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY305865 ID=DY305865; Name=DY305865; organism=Citrus sinensis; type=EST; length=1240bpback to top |