EY702673

Overview
NameEY702673
Unique NameEY702673
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length490
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702673 vs. ExPASy Swiss-Prot
Match: G3P_CANAL (Glyceraldehyde-3-phosphate dehydrogenase OS=Candida albicans GN=TDH1 PE=1 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 8.723e-43
Identity = 86/143 (60.14%), Postives = 105/143 (73.43%), Query Frame = 2
Query:   62 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGANKVIISAPSKDAPMFVVGVNEHEYKPEL 490
            +KIGINGFGRIGRLV RV L R D+E+VAVNDPFI  DY  YMFKYDS HG++K  E+    D  ++ G K + VF  R+P  IPW ++G +YV+ESTGVFT  + A  H+  GA KVII+APS DAPMFVVGVNE +Y P+L
Sbjct:    3 IKIGINGFGRIGRLVLRVALGRKDIEVVAVNDPFIAPDYAAYMFKYDSTHGRYKG-EVTASGDDLVIDGHK-IKVFQERDPANIPWGKSGVDYVIESTGVFTKVEGAQKHIDAGAKKVIITAPSADAPMFVVGVNEDKYTPDL 143          
BLAST of EY702673 vs. ExPASy Swiss-Prot
Match: G3P_TRISI (Glyceraldehyde-3-phosphate dehydrogenase OS=Trionyx sinensis GN=GAPDH PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 1.139e-42
Identity = 84/143 (58.74%), Postives = 107/143 (74.83%), Query Frame = 2
Query:   62 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGANKVIISAPSKDAPMFVVGVNEHEYKPEL 490
            VKIG+NGFGRIGRLV R     D V++VA+NDPFI  +YM YMFKYDS HG++ H  +K ++ K ++ G+  +T+F  R+P  I W + GAEYVVESTGVFT  +KA+AHLKGGA +V+ISAPS DAPMFV+GVN  +Y   L
Sbjct:    2 VKIGVNGFGRIGRLVTRAAFTCDKVQIVAINDPFIDLNYMVYMFKYDSTHGRF-HGTVKAENGKLVINGQA-ITIFQERDPANIKWGDAGAEYVVESTGVFTTTEKASAHLKGGAKRVVISAPSADAPMFVMGVNHEKYDNSL 142          
BLAST of EY702673 vs. ExPASy Swiss-Prot
Match: G3P_RAT (Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus GN=Gapdh PE=1 SV=3)

HSP 1 Score: 172.17 bits (435), Expect = 1.139e-42
Identity = 84/143 (58.74%), Postives = 107/143 (74.83%), Query Frame = 2
Query:   62 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGANKVIISAPSKDAPMFVVGVNEHEYKPEL 490
            VK+G+NGFGRIGRLV R     D V++VA+NDPFI  +YM YMF+YDS HG++ +  +K ++ K ++ G KP+T+F  R+P  I W + GAEYVVESTGVFT  +KA AHLKGGA +VIISAPS DAPMFV+GVN  +Y   L
Sbjct:    2 VKVGVNGFGRIGRLVTRAAFSCDKVDIVAINDPFIDLNYMVYMFQYDSTHGKF-NGTVKAENGKLVING-KPITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNHEKYDNSL 142          
BLAST of EY702673 vs. ExPASy Swiss-Prot
Match: G3P_MOUSE (Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus GN=Gapdh PE=1 SV=2)

HSP 1 Score: 172.17 bits (435), Expect = 1.139e-42
Identity = 85/143 (59.44%), Postives = 107/143 (74.83%), Query Frame = 2
Query:   62 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGANKVIISAPSKDAPMFVVGVNEHEYKPEL 490
            VK+G+NGFGRIGRLV R  +    VE+VA+NDPFI  +YM YMF+YDS HG++ +  +K ++ K ++ G KP+T+F  R+P  I W E GAEYVVESTGVFT  +KA AHLKGGA +VIISAPS DAPMFV+GVN  +Y   L
Sbjct:    2 VKVGVNGFGRIGRLVTRAAICSGKVEIVAINDPFIDLNYMVYMFQYDSTHGKF-NGTVKAENGKLVING-KPITIFQERDPTNIKWGEAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNHEKYDNSL 142          
BLAST of EY702673 vs. ExPASy Swiss-Prot
Match: G3P_COCIM (Glyceraldehyde-3-phosphate dehydrogenase OS=Coccidioides immitis GN=GPD PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 1.488e-42
Identity = 87/143 (60.84%), Postives = 108/143 (75.52%), Query Frame = 2
Query:   62 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGANKVIISAPSKDAPMFVVGVNEHEYKPEL 490
            VK+GINGFGRIGR+V R  ++  +VE+VAVNDPFI T Y  YM KYDS HG++K  ++K  D+   + G K V  +  R+P  IPWAETGA+YV+ESTGVFT  +KA+AHLKGGA KVIISAPS DAPMFV+GVN   YK ++
Sbjct:    3 VKVGINGFGRIGRIVFRNAVEHPEVEIVAVNDPFIETHYAAYMLKYDSTHGRFKG-DVKFSDNGLDVDG-KHVRFYQERDPANIPWAETGADYVIESTGVFTTTEKASAHLKGGAKKVIISAPSADAPMFVMGVNNETYKSDI 143          
BLAST of EY702673 vs. ExPASy Swiss-Prot
Match: G3P_COCHE (Glyceraldehyde-3-phosphate dehydrogenase OS=Cochliobolus heterostrophus GN=GPD1 PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 1.488e-42
Identity = 86/143 (60.14%), Postives = 105/143 (73.43%), Query Frame = 2
Query:   62 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGANKVIISAPSKDAPMFVVGVNEHEYKPEL 490
            VK+GINGFGRIGR+V R  ++ +DV++VAVNDPFI   Y  YM KYDS HGQ+K  ++KV D   L    K +     ++P  IPW+ETGA YVVESTGVFT  +KA AHLKGGA KV+ISAPS DAPMFV+GVN   YKP++
Sbjct:    3 VKVGINGFGRIGRIVFRNAIEHNDVDIVAVNDPFIEPHYAAYMLKYDSTHGQFKG-DIKV-DGNNLTVNGKTIRFHMEKDPANIPWSETGAYYVVESTGVFTTTEKAKAHLKGGAKKVVISAPSPDAPMFVMGVNHETYKPDI 143          
BLAST of EY702673 vs. ExPASy Swiss-Prot
Match: G3P_BRUMA (Glyceraldehyde-3-phosphate dehydrogenase OS=Brugia malayi GN=G3PD PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.943e-42
Identity = 87/143 (60.84%), Postives = 105/143 (73.43%), Query Frame = 2
Query:   59 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKP---VTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGANKVIISAPSKDAPMFVVGVNEHEY 478
            K K+GINGFGRIGRLV R  +++D V++VAVNDPFI  DYM YMFKYDS HG++K   +  +  K ++   K    ++V   ++P EIPW   GAEYVVESTGVFT  DKA+AHLKGGA KVIISAPS DAPMFV+GVN   Y
Sbjct:    3 KPKVGINGFGRIGRLVLRAAVEKDTVDVVAVNDPFINIDYMVYMFKYDSTHGRFKG-SVSAEGGKLIVTNGKTTHHISVHNSKDPAEIPWGVDGAEYVVESTGVFTTTDKASAHLKGGAKKVIISAPSADAPMFVMGVNNDMY 144          
BLAST of EY702673 vs. ExPASy Swiss-Prot
Match: G3P_CURLU (Glyceraldehyde-3-phosphate dehydrogenase OS=Curvularia lunata GN=GPD PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 4.329e-42
Identity = 87/143 (60.84%), Postives = 104/143 (72.73%), Query Frame = 2
Query:   62 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGANKVIISAPSKDAPMFVVGVNEHEYKPEL 490
            VK+GINGFGRIGR+V R  ++ +DVE+VAVNDPFI   Y  YM KYDS HGQ+K  ++KV D   L    K V     ++P  IPW+ETGA YVVESTGVFT  +KA AHLKGGA KV+ISAPS DAPMFV+GVN   YK ++
Sbjct:    3 VKVGINGFGRIGRIVFRNAIEHNDVEIVAVNDPFIEPHYAAYMLKYDSTHGQFKG-DIKV-DGNNLTVNGKTVRFHMEKDPANIPWSETGAYYVVESTGVFTTTEKAKAHLKGGAKKVVISAPSADAPMFVMGVNHETYKSDI 143          
BLAST of EY702673 vs. ExPASy Swiss-Prot
Match: G3P_COCP7 (Glyceraldehyde-3-phosphate dehydrogenase OS=Coccidioides posadasii (strain C735) GN=GPD PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 4.329e-42
Identity = 86/143 (60.14%), Postives = 108/143 (75.52%), Query Frame = 2
Query:   62 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGANKVIISAPSKDAPMFVVGVNEHEYKPEL 490
            VK+GINGFGRIGR+V R  ++  +VE+VAVNDPFI T Y  YM KYDS HG++K  ++K  ++   + G K V  +  R+P  IPWAETGA+YV+ESTGVFT  +KA+AHLKGGA KVIISAPS DAPMFV+GVN   YK ++
Sbjct:    3 VKVGINGFGRIGRIVFRNAVEHPEVEIVAVNDPFIETHYAAYMLKYDSTHGRFKG-DVKFSENGLDVDG-KHVRFYQERDPANIPWAETGADYVIESTGVFTTTEKASAHLKGGAKKVIISAPSADAPMFVMGVNNETYKSDI 143          
BLAST of EY702673 vs. ExPASy Swiss-Prot
Match: G3P1_GLORO (Glyceraldehyde-3-phosphate dehydrogenase 1 (Fragment) OS=Globodera rostochiensis GN=GPD-1 PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 4.329e-42
Identity = 85/148 (57.43%), Postives = 106/148 (71.62%), Query Frame = 2
Query:   59 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKP------VTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGANKVIISAPSKDAPMFVVGVNEHEYKP 484
            K K+GINGFGRIGRL  R  +++D V++VA+NDPFI  DYM YMF YDS HG++     K+      L  EK       + VF +++P EI WAE GAEYV+ESTGVFT  +KA+AHLKGGA KV+ISAPS DAPM+V+GVNE +Y P
Sbjct:    3 KPKVGINGFGRIGRLALRAAVEKDTVQVVAINDPFIELDYMVYMFNYDSTHGRFNG---KISTSAGNLVVEKEGKATHTIKVFNLKDPAEIKWAEVGAEYVIESTGVFTTIEKASAHLKGGAKKVVISAPSADAPMYVMGVNEDKYDP 147          
The following BLAST results are available for this feature:
BLAST of EY702673 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 344
Match NameE-valueIdentityDescription
G3P_CANAL8.723e-4360.14Glyceraldehyde-3-phosphate dehydrogenase OS=Candid... [more]
G3P_TRISI1.139e-4258.74Glyceraldehyde-3-phosphate dehydrogenase OS=Triony... [more]
G3P_RAT1.139e-4258.74Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus... [more]
G3P_MOUSE1.139e-4259.44Glyceraldehyde-3-phosphate dehydrogenase OS=Mus mu... [more]
G3P_COCIM1.488e-4260.84Glyceraldehyde-3-phosphate dehydrogenase OS=Coccid... [more]
G3P_COCHE1.488e-4260.14Glyceraldehyde-3-phosphate dehydrogenase OS=Cochli... [more]
G3P_BRUMA1.943e-4260.84Glyceraldehyde-3-phosphate dehydrogenase OS=Brugia... [more]
G3P_CURLU4.329e-4260.84Glyceraldehyde-3-phosphate dehydrogenase OS=Curvul... [more]
G3P_COCP74.329e-4260.14Glyceraldehyde-3-phosphate dehydrogenase OS=Coccid... [more]
G3P1_GLORO4.329e-4257.43Glyceraldehyde-3-phosphate dehydrogenase 1 (Fragme... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-010-H04-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702673 ID=EY702673; Name=EY702673; organism=Citrus sinensis; type=EST; length=490bp
CTACAACTTTCTTCACCACTCTTTCACCGCTCAATTTCATCTCTCGAGAA
TCAGGGGGAAGGTCAAGATCGGAATCAACGGATTCGGAAGAATTGGTAGG
CTGGTGGCAAGAGTCATCTTGCAGAGGGACGATGTTGAACTCGTTGCTGT
TAATGATCCCTTTATCACGACCGATTACATGACATACATGTTTAAGTACG
ACAGTGTTCACGGTCAATGGAAGCACCATGAATTGAAGGTTAAGGACGAT
AAGACCCTTCTCTTTGGTGAGAAGCCTGTCACTGTTTTCGGTGTTAGGAA
CCCAGAGGAGATCCCATGGGCTGAGACTGGAGCCGAGTATGTTGTGGAGT
CGACTGGAGTCTTTACAGACAAGGATAAGGCTGCTGCCCATTTGAAGGGT
GGAGCTAACAAAGTTATCATCTCAGCCCCCAGCAAGGATGCTCCTATGTT
TGTTGTGGGTGTCAATGAGCACGAGTACAAACCAGAGCTC
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