DY305849
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305849 vs. ExPASy Swiss-Prot
Match: PRS6B_HUMAN (26S protease regulatory subunit 6B OS=Homo sapiens GN=PSMC4 PE=1 SV=2) HSP 1 Score: 144.05 bits (362), Expect = 1.193e-37 Identity = 78/217 (35.94%), Postives = 120/217 (55.30%), Query Frame = 2 Query: 173 QYYLQHIHELQLQVRQKTHNLNRLRAHRNELNSRVRMLKE*LQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMDRELFVMA 823 Q L+ + + ++ + NL + H E R++ + +G+ ++ + +N +V Y V P+ VAL S L +LP + D + ++ ++ PD Y IGG+D Q +E++E +ELP+ H EL++ +GI P+GVL+YGPPG GKT+LA+AVAHHT FIRV GSE VQKY+GEG RM R++F +A Sbjct: 48 QQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIP----------LVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLA 254 HSP 2 Score: 35.039 bits (79), Expect = 1.193e-37 Identity = 29/88 (32.95%), Postives = 40/88 (45.45%), Query Frame = 1 Query: 811 FCYGREHAPSIIFMDEIDXXXXXXXXXXXXXXEREVQRTKLDRPTSLDGFNHQPK*GSSGRQNNWNFPIQALPRPETIWRKKLNFQTP 1074 F +E+AP+IIF+DEID +REVQR L+ +DGF+ N + AL RP + R K+ F P Sbjct: 251 FRLAKENAPAIIFIDEID-AIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDR-KIEFPLP 336
BLAST of DY305849 vs. ExPASy Swiss-Prot
Match: PRS6B_BOVIN (26S protease regulatory subunit 6B OS=Bos taurus GN=PSMC4 PE=2 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 1.193e-37 Identity = 78/217 (35.94%), Postives = 120/217 (55.30%), Query Frame = 2 Query: 173 QYYLQHIHELQLQVRQKTHNLNRLRAHRNELNSRVRMLKE*LQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMDRELFVMA 823 Q L+ + + ++ + NL + H E R++ + +G+ ++ + +N +V Y V P+ VAL S L +LP + D + ++ ++ PD Y IGG+D Q +E++E +ELP+ H EL++ +GI P+GVL+YGPPG GKT+LA+AVAHHT FIRV GSE VQKY+GEG RM R++F +A Sbjct: 48 QQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIP----------LVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLA 254 HSP 2 Score: 35.039 bits (79), Expect = 1.193e-37 Identity = 29/88 (32.95%), Postives = 40/88 (45.45%), Query Frame = 1 Query: 811 FCYGREHAPSIIFMDEIDXXXXXXXXXXXXXXEREVQRTKLDRPTSLDGFNHQPK*GSSGRQNNWNFPIQALPRPETIWRKKLNFQTP 1074 F +E+AP+IIF+DEID +REVQR L+ +DGF+ N + AL RP + R K+ F P Sbjct: 251 FRLAKENAPAIIFIDEID-AIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDR-KIEFPLP 336
BLAST of DY305849 vs. ExPASy Swiss-Prot
Match: PR6AA_XENLA (26S protease regulatory subunit 6A-A OS=Xenopus laevis GN=psmc3-A PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 1.251e-37 Identity = 80/231 (34.63%), Postives = 130/231 (56.28%), Query Frame = 2 Query: 140 RSIEDKAEGLRQYYLQHIHELQLQVRQKTHNLNRLRAHRNE---LNSRVRMLKE*LQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMDRELFVMA 823 R ++ + + ++ L+ HELQ + N +++ ++ +++ + +L +E G+ + + GK V +K Y + P V + DSY++ LP++ D V M+V++ P Y IGGLD+QI+E+ E I LP+ H E FE+LGI PKGVL+YGPPGTGKTLLARA A T TF++++G +LVQ +IG+G+++ R+ F +A Sbjct: 30 RLLDSEIKIMKSEVLRVTHELQAMRDKIKENSEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDLDSQRKGKCAV-IKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALA 259 HSP 2 Score: 38.5058 bits (88), Expect = 1.251e-37 Identity = 22/50 (44.00%), Postives = 27/50 (54.00%), Query Frame = 1 Query: 811 FCYGREHAPSIIFMDEIDXXXXXXXXXXXXXXEREVQRTKLDRPTSLDGF 960 F +E APSIIF+DE+D +REVQRT L+ LDGF Sbjct: 256 FALAKEKAPSIIFIDELD-AIGTKRFDSEKAGDREVQRTMLELLNQLDGF 304 HSP 3 Score: 23.0978 bits (48), Expect = 1.251e-37 Identity = 12/45 (26.67%), Postives = 26/45 (57.78%), Query Frame = 3 Query: 942 HQLGWI*PPTKIRVLGTTKQLEFPNSSSSPARNYLEKKIEFPNPH 1076 +QL P +++V+ T +++ + + + L++KIEFP P+ Sbjct: 299 NQLDGFQPNMQVKVIAATNRVDILDPALLRSGR-LDRKIEFPMPN 342
BLAST of DY305849 vs. ExPASy Swiss-Prot
Match: PRS6B_MOUSE (26S protease regulatory subunit 6B OS=Mus musculus GN=Psmc4 PE=1 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.554e-37 Identity = 78/217 (35.94%), Postives = 119/217 (54.84%), Query Frame = 2 Query: 173 QYYLQHIHELQLQVRQKTHNLNRLRAHRNELNSRVRMLKE*LQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMDRELFVMA 823 Q L+ + + ++ + NL + H E R++ + +G+ ++ + +N +V Y V P+ VAL S L +LP D + ++ ++ PD Y IGG+D Q +E++E +ELP+ H EL++ +GI P+GVL+YGPPG GKT+LA+AVAHHT FIRV GSE VQKY+GEG RM R++F +A Sbjct: 48 QQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIP----------LVIGQFLEAVDQNTAIVASTTGSNYYVRMVSTIDRELLKPNASVALHKHSNALVDVLPPAADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLA 254 HSP 2 Score: 35.039 bits (79), Expect = 1.554e-37 Identity = 29/88 (32.95%), Postives = 40/88 (45.45%), Query Frame = 1 Query: 811 FCYGREHAPSIIFMDEIDXXXXXXXXXXXXXXEREVQRTKLDRPTSLDGFNHQPK*GSSGRQNNWNFPIQALPRPETIWRKKLNFQTP 1074 F +E+AP+IIF+DEID +REVQR L+ +DGF+ N + AL RP + R K+ F P Sbjct: 251 FRLAKENAPAIIFIDEID-AIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDR-KIEFPLP 336
BLAST of DY305849 vs. ExPASy Swiss-Prot
Match: PSMR2_HALSA (Proteasome-activating nucleotidase 2 OS=Halobacterium salinarium GN=pan2 PE=3 SV=2) HSP 1 Score: 142.51 bits (358), Expect = 2.638e-37 Identity = 80/221 (36.20%), Postives = 130/221 (58.82%), Query Frame = 2 Query: 170 RQYYLQHIHELQLQVRQKTHNLNRL---RAHRNELNSRVRMLKE*LQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMDRELFVMA 823 +Q L+ + E + ++ +RL A N+ ++ L + L++ ++ V ++ + V +K H + + P +RVA+ N V+ L + D +M+V+ PD Y+ IGGLD Q++E++E +ELP+K P LFE++GI P GVLL+GPPGTGKTL+A+AVA TD +FI+++GSELV K+IGEG+++ R+LF +A Sbjct: 20 QQDKLEALEEQLSTLEEENEERDRLLDANAENNKYQQKLERLSHENKKLKQSPLFIATVQELTDEGAV-IKQHGNNQEALTEVTDELRATLEPGSRVAVNNSLSVVRQ-LDDEADVRARVMEVDDSPDVGYEDIGGLDDQLREVRETVELPMKDPGLFETVGINPPSGVLLHGPPGTGKTLMAKAVASQTDASFIKMAGSELVHKFIGEGAKLVRDLFQVA 238 HSP 2 Score: 35.4242 bits (80), Expect = 2.638e-37 Identity = 21/75 (28.00%), Postives = 36/75 (48.00%), Query Frame = 1 Query: 811 FCYGREHAPSIIFMDEIDXXXXXXXXXXXXXXEREVQRTKLDRPTSLDGFNHQPK*GSSGRQNNWNFPIQALPRP 1035 F R+H P+++F+DEID + EVQRT + + +DGF+ + N ++ +A+ RP Sbjct: 235 FQVARDHEPAVVFIDEID-AIASKRTDSKTSGDAEVQRTMMQLLSEMDGFDERGDIRIIAATNRFDMLDRAILRP 308
BLAST of DY305849 vs. ExPASy Swiss-Prot
Match: PRS6B_DICDI (26S protease regulatory subunit 6B homolog OS=Dictyostelium discoideum GN=psmC4 PE=1 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 1.289e-36 Identity = 78/204 (38.24%), Postives = 116/204 (56.86%), Query Frame = 2 Query: 212 VRQKTHNLNRLRAHRNELNSRVRMLKE*LQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMDRELFVMA 823 ++ + NL R H E R+R + +G++++++ N +V+ V PS VAL+ S L LP + D ++L+ ++ P +Y IGG D Q +E++E +ELP+ H L++ +GI P+GVLLYGPPGTGKT+LA+AVAHHT FIRV GSE VQKY+GEG R+ R++F +A Sbjct: 46 IKYEYKNLKRELLHAQEEVKRIRSVP----------LLIGQLLEMVDSNTGIVQSTSGSTLCVRILSTIDRELLKPSASVALQRHSNALVDTLPPESDSSIHLLGADEKPSESYSDIGGGDIQKQEMREAVELPLTHHNLYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHHTSAAFIRVVGSEFVQKYLGEGPRLVRDVFRLA 239 HSP 2 Score: 33.8834 bits (76), Expect = 1.289e-36 Identity = 19/51 (37.25%), Postives = 28/51 (54.90%), Query Frame = 1 Query: 811 FCYGREHAPSIIFMDEIDXXXXXXXXXXXXXXEREVQRTKLDRPTSLDGFN 963 F RE++P+IIF+DEID +REVQR ++ +DGF+ Sbjct: 236 FRLARENSPAIIFIDEID-AIATKRFDAQTGADREVQRILMELLNQMDGFD 285
BLAST of DY305849 vs. ExPASy Swiss-Prot
Match: PS6AB_ARATH (26S protease regulatory subunit 6A homolog B OS=Arabidopsis thaliana GN=RPT5B PE=1 SV=3) HSP 1 Score: 135.576 bits (340), Expect = 1.678e-36 Identity = 65/129 (50.39%), Postives = 93/129 (72.09%), Query Frame = 2 Query: 437 PSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMDRELFVMA 823 P V + DSY++ LPS+ D V M+V++ P Y+ IGGL++QI+E+ E I LP+ H E FE LGI PKGVLLYGPPGTGKTL+ARA A T+ TF++++G +LVQ +IG+G+++ R+ F++A Sbjct: 131 PGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFLLA 259 HSP 2 Score: 39.6614 bits (91), Expect = 1.678e-36 Identity = 31/94 (32.98%), Postives = 43/94 (45.74%), Query Frame = 1 Query: 811 FCYGREHAPSIIFMDEIDXXXXXXXXXXXXXXEREVQRTKLDRPTSLDGFNHQPK*GSSGRQNNWNFPIQALPRPETIWRKKLNFQTPTGKSPG 1092 F +E +P IIF+DEID +REVQRT L+ LDGF+ + N + AL R + R K+ F PT ++ G Sbjct: 256 FLLAKEKSPCIIFIDEIDAIGTKRFDSEVSG-DREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDR-KIEFPHPTEEARG 347
BLAST of DY305849 vs. ExPASy Swiss-Prot
Match: PRS6A_ENCCU (26S protease regulatory subunit 6A OS=Encephalitozoon cuniculi GN=RPT5 PE=1 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 2.188e-36 Identity = 81/210 (38.57%), Postives = 119/210 (56.67%), Query Frame = 2 Query: 200 LQLQVRQKTHNLNRLRAHRNELNSRVRMLKE*LQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVN--LMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMDRELFVMA 823 LQ +V H+++ A E R+R+ K+ L VG VV+V+ ++ +V + P VAL D+ ++ LP D V ++K + PD TY+ IGGL++QI+E+ E I L + HPE FE L I PKGVL+YGPPGTGKTL+ARA A T+ TF++++G +LVQ YIG+G+R+ R+ F +A Sbjct: 35 LQSRVNTIKHDISTKNASIAENMERIRLNKQLPYL-------VGNVVEVLDEHSGVVNASTRMSSYLPITGLIPNSELRPGDLVALHKDTNIVFEKLPPDYDMKVGGMVLKSDAKPDETYEDIGGLERQIEELNEAIVLSLTHPERFEKLNIKPPKGVLMYGPPGTGKTLMARACASKTNATFLKLAGPQLVQMYIGDGARLVRDAFALA 237 HSP 2 Score: 36.965 bits (84), Expect = 2.188e-36 Identity = 21/51 (41.18%), Postives = 27/51 (52.94%), Query Frame = 1 Query: 811 FCYGREHAPSIIFMDEIDXXXXXXXXXXXXXXEREVQRTKLDRPTSLDGFN 963 F +E P+IIF+DEID +REVQRT L+ LDGF+ Sbjct: 234 FALAKERKPTIIFIDEID-AIGAKRSDSDQTGDREVQRTMLELLNQLDGFS 283
BLAST of DY305849 vs. ExPASy Swiss-Prot
Match: PS6AA_ARATH (26S protease regulatory subunit 6A homolog A OS=Arabidopsis thaliana GN=RPT5A PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 1.068e-35 Identity = 64/129 (49.61%), Postives = 92/129 (71.32%), Query Frame = 2 Query: 437 PSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMDRELFVMA 823 P V + DSY++ LPS+ D V M+V++ P Y+ IGGL++QI+E+ E I LP+ H E FE LG+ PKGVLLYGPPGTGKTL+ARA A T+ TF++++G +LVQ +IG+G+++ R+ F +A Sbjct: 132 PGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLA 260 HSP 2 Score: 38.5058 bits (88), Expect = 1.068e-35 Identity = 31/89 (34.83%), Postives = 40/89 (44.94%), Query Frame = 1 Query: 811 FCYGREHAPSIIFMDEIDXXXXXXXXXXXXXXEREVQRTKLDRPTSLDGFNHQPK*GSSGRQNNWNFPIQALPRPETIWRKKLNFQTPT 1077 F +E AP IIF+DEID +REVQRT L+ LDGF+ + N + AL R + R K+ F PT Sbjct: 257 FQLAKEKAPCIIFIDEID-AIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDR-KIEFPHPT 343
BLAST of DY305849 vs. ExPASy Swiss-Prot
Match: PRS6A_BRACM (26S protease regulatory subunit 6A homolog OS=Brassica campestris GN=TBP1 PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 1.068e-35 Identity = 64/129 (49.61%), Postives = 92/129 (71.32%), Query Frame = 2 Query: 437 PSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMDRELFVMA 823 P V + DSY++ LPS+ D V M+V++ P Y+ IGGL++QI+E+ E I LP+ H E FE LG+ PKGVLLYGPPGTGKTL+ARA A T+ TF++++G +LVQ +IG+G+++ R+ F +A Sbjct: 132 PGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLA 260 HSP 2 Score: 38.5058 bits (88), Expect = 1.068e-35 Identity = 31/89 (34.83%), Postives = 40/89 (44.94%), Query Frame = 1 Query: 811 FCYGREHAPSIIFMDEIDXXXXXXXXXXXXXXEREVQRTKLDRPTSLDGFNHQPK*GSSGRQNNWNFPIQALPRPETIWRKKLNFQTPT 1077 F +E AP IIF+DEID +REVQRT L+ LDGF+ + N + AL R + R K+ F PT Sbjct: 257 FQLAKEKAPCIIFIDEID-AIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDR-KIEFPHPT 343 The following BLAST results are available for this feature:
BLAST of DY305849 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 358
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY305849 ID=DY305849; Name=DY305849; organism=Citrus sinensis; type=EST; length=1166bpback to top |