DY305849

Overview
NameDY305849
Unique NameDY305849
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1166
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY305849 vs. ExPASy Swiss-Prot
Match: TERA_RAT (Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus GN=Vcp PE=1 SV=3)

HSP 1 Score: 103.99 bits (258), Expect = 2.066e-22
Identity = 47/104 (45.19%), Postives = 72/104 (69.23%), Query Frame = 2 
Query:  503 DPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMDRELF 814
            +P+    + E + +  YD IGG  +Q+ +IKE++ELP++HP LF+++G+  P+G+LLYGPPGTGKTL+ARAVA+ T   F  ++G E++ K  GE     R+ F
Sbjct:  187 EPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAF 290

HSP 2 Score: 23.8682 bits (50), Expect = 2.066e-22
Identity = 9/20 (45.00%), Postives = 15/20 (75.00%), Query Frame = 1 
Query:  805 RTFCYGREHAPSIIFMDEID 864
            + F    ++AP+IIF+DE+D
Sbjct:  288 KAFEEAEKNAPAIIFIDELD 307

HSP 3 Score: 93.9745 bits (232), Expect = 5.499e-19
Identity = 44/107 (41.12%), Postives = 67/107 (62.62%), Query Frame = 2 
Query:  494 SKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMDRELF 814
            S+ +P      V +VP  T++ IGGL+   +E++E+++ P++HP+ F   G+   KGVL YGPPG GKTLLA+A+A+     FI + G EL+  + GE     RE+F
Sbjct:  457 SQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIF 563

HSP 4 Score: 22.3274 bits (46), Expect = 5.499e-19
Identity = 8/18 (44.44%), Postives = 12/18 (66.67%), Query Frame = 1 
Query:  811 FCYGREHAPSIIFMDEID 864
            F   R+ AP ++F DE+D
Sbjct:  563 FDKARQAAPCVLFFDELD 580
[Close]
BLAST of DY305849 vs. ExPASy Swiss-Prot
Match: TERA_PIG (Transitional endoplasmic reticulum ATPase OS=Sus scrofa GN=VCP PE=1 SV=5)

HSP 1 Score: 103.99 bits (258), Expect = 2.066e-22
Identity = 47/104 (45.19%), Postives = 72/104 (69.23%), Query Frame = 2 
Query:  503 DPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMDRELF 814
            +P+    + E + +  YD IGG  +Q+ +IKE++ELP++HP LF+++G+  P+G+LLYGPPGTGKTL+ARAVA+ T   F  ++G E++ K  GE     R+ F
Sbjct:  187 EPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAF 290

HSP 2 Score: 23.8682 bits (50), Expect = 2.066e-22
Identity = 9/20 (45.00%), Postives = 15/20 (75.00%), Query Frame = 1 
Query:  805 RTFCYGREHAPSIIFMDEID 864
            + F    ++AP+IIF+DE+D
Sbjct:  288 KAFEEAEKNAPAIIFIDELD 307

HSP 3 Score: 92.8189 bits (229), Expect = 1.209e-18
Identity = 43/107 (40.19%), Postives = 67/107 (62.62%), Query Frame = 2 
Query:  494 SKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMDRELF 814
            S+ +P      V +VP  T++ IGGL+   +E++++++ P++HP+ F   G+   KGVL YGPPG GKTLLA+A+A+     FI + G EL+  + GE     RE+F
Sbjct:  457 SQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQDLVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIF 563

HSP 4 Score: 22.3274 bits (46), Expect = 1.209e-18
Identity = 8/18 (44.44%), Postives = 12/18 (66.67%), Query Frame = 1 
Query:  811 FCYGREHAPSIIFMDEID 864
            F   R+ AP ++F DE+D
Sbjct:  563 FDKARQAAPCVLFFDELD 580
[Close]
BLAST of DY305849 vs. ExPASy Swiss-Prot
Match: TERA_MOUSE (Transitional endoplasmic reticulum ATPase OS=Mus musculus GN=Vcp PE=1 SV=4)

HSP 1 Score: 103.99 bits (258), Expect = 2.066e-22
Identity = 47/104 (45.19%), Postives = 72/104 (69.23%), Query Frame = 2 
Query:  503 DPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMDRELF 814
            +P+    + E + +  YD IGG  +Q+ +IKE++ELP++HP LF+++G+  P+G+LLYGPPGTGKTL+ARAVA+ T   F  ++G E++ K  GE     R+ F
Sbjct:  187 EPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAF 290

HSP 2 Score: 23.8682 bits (50), Expect = 2.066e-22
Identity = 9/20 (45.00%), Postives = 15/20 (75.00%), Query Frame = 1 
Query:  805 RTFCYGREHAPSIIFMDEID 864
            + F    ++AP+IIF+DE+D
Sbjct:  288 KAFEEAEKNAPAIIFIDELD 307

HSP 3 Score: 93.9745 bits (232), Expect = 5.499e-19
Identity = 44/107 (41.12%), Postives = 67/107 (62.62%), Query Frame = 2 
Query:  494 SKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMDRELF 814
            S+ +P      V +VP  T++ IGGL+   +E++E+++ P++HP+ F   G+   KGVL YGPPG GKTLLA+A+A+     FI + G EL+  + GE     RE+F
Sbjct:  457 SQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIF 563

HSP 4 Score: 22.3274 bits (46), Expect = 5.499e-19
Identity = 8/18 (44.44%), Postives = 12/18 (66.67%), Query Frame = 1 
Query:  811 FCYGREHAPSIIFMDEID 864
            F   R+ AP ++F DE+D
Sbjct:  563 FDKARQAAPCVLFFDELD 580
[Close]
BLAST of DY305849 vs. ExPASy Swiss-Prot
Match: TERA_HUMAN (Transitional endoplasmic reticulum ATPase OS=Homo sapiens GN=VCP PE=1 SV=4)

HSP 1 Score: 103.99 bits (258), Expect = 2.066e-22
Identity = 47/104 (45.19%), Postives = 72/104 (69.23%), Query Frame = 2 
Query:  503 DPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMDRELF 814
            +P+    + E + +  YD IGG  +Q+ +IKE++ELP++HP LF+++G+  P+G+LLYGPPGTGKTL+ARAVA+ T   F  ++G E++ K  GE     R+ F
Sbjct:  187 EPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAF 290

HSP 2 Score: 23.8682 bits (50), Expect = 2.066e-22
Identity = 9/20 (45.00%), Postives = 15/20 (75.00%), Query Frame = 1 
Query:  805 RTFCYGREHAPSIIFMDEID 864
            + F    ++AP+IIF+DE+D
Sbjct:  288 KAFEEAEKNAPAIIFIDELD 307

HSP 3 Score: 93.9745 bits (232), Expect = 5.499e-19
Identity = 44/107 (41.12%), Postives = 67/107 (62.62%), Query Frame = 2 
Query:  494 SKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMDRELF 814
            S+ +P      V +VP  T++ IGGL+   +E++E+++ P++HP+ F   G+   KGVL YGPPG GKTLLA+A+A+     FI + G EL+  + GE     RE+F
Sbjct:  457 SQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIF 563

HSP 4 Score: 22.3274 bits (46), Expect = 5.499e-19
Identity = 8/18 (44.44%), Postives = 12/18 (66.67%), Query Frame = 1 
Query:  811 FCYGREHAPSIIFMDEID 864
            F   R+ AP ++F DE+D
Sbjct:  563 FDKARQAAPCVLFFDELD 580
[Close]
BLAST of DY305849 vs. ExPASy Swiss-Prot
Match: TERA_BOVIN (Transitional endoplasmic reticulum ATPase OS=Bos taurus GN=VCP PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 2.066e-22
Identity = 47/104 (45.19%), Postives = 72/104 (69.23%), Query Frame = 2 
Query:  503 DPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMDRELF 814
            +P+    + E + +  YD IGG  +Q+ +IKE++ELP++HP LF+++G+  P+G+LLYGPPGTGKTL+ARAVA+ T   F  ++G E++ K  GE     R+ F
Sbjct:  187 EPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAF 290

HSP 2 Score: 23.8682 bits (50), Expect = 2.066e-22
Identity = 9/20 (45.00%), Postives = 15/20 (75.00%), Query Frame = 1 
Query:  805 RTFCYGREHAPSIIFMDEID 864
            + F    ++AP+IIF+DE+D
Sbjct:  288 KAFEEAEKNAPAIIFIDELD 307

HSP 3 Score: 93.9745 bits (232), Expect = 5.499e-19
Identity = 44/107 (41.12%), Postives = 67/107 (62.62%), Query Frame = 2 
Query:  494 SKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMDRELF 814
            S+ +P      V +VP  T++ IGGL+   +E++E+++ P++HP+ F   G+   KGVL YGPPG GKTLLA+A+A+     FI + G EL+  + GE     RE+F
Sbjct:  457 SQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIF 563

HSP 4 Score: 22.3274 bits (46), Expect = 5.499e-19
Identity = 8/18 (44.44%), Postives = 12/18 (66.67%), Query Frame = 1 
Query:  811 FCYGREHAPSIIFMDEID 864
            F   R+ AP ++F DE+D
Sbjct:  563 FDKARQAAPCVLFFDELD 580
[Close]
BLAST of DY305849 vs. ExPASy Swiss-Prot
Match: TERA_XENTR (Transitional endoplasmic reticulum ATPase OS=Xenopus tropicalis GN=vcp PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 2.066e-22
Identity = 47/104 (45.19%), Postives = 72/104 (69.23%), Query Frame = 2 
Query:  503 DPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMDRELF 814
            +P+    + E + +  YD IGG  +Q+ +IKE++ELP++HP LF+++G+  P+G+LLYGPPGTGKTL+ARAVA+ T   F  ++G E++ K  GE     R+ F
Sbjct:  187 EPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAF 290

HSP 2 Score: 23.8682 bits (50), Expect = 2.066e-22
Identity = 9/20 (45.00%), Postives = 15/20 (75.00%), Query Frame = 1 
Query:  805 RTFCYGREHAPSIIFMDEID 864
            + F    ++AP+IIF+DE+D
Sbjct:  288 KAFEEAEKNAPAIIFIDELD 307

HSP 3 Score: 93.9745 bits (232), Expect = 5.499e-19
Identity = 44/107 (41.12%), Postives = 67/107 (62.62%), Query Frame = 2 
Query:  494 SKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMDRELF 814
            S+ +P      V +VP  T++ IGGL+   +E++E+++ P++HP+ F   G+   KGVL YGPPG GKTLLA+A+A+     FI + G EL+  + GE     RE+F
Sbjct:  457 SQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIF 563

HSP 4 Score: 22.3274 bits (46), Expect = 5.499e-19
Identity = 8/18 (44.44%), Postives = 12/18 (66.67%), Query Frame = 1 
Query:  811 FCYGREHAPSIIFMDEID 864
            F   R+ AP ++F DE+D
Sbjct:  563 FDKARQAAPCVLFFDELD 580
[Close]
BLAST of DY305849 vs. ExPASy Swiss-Prot
Match: TERA_XENLA (Transitional endoplasmic reticulum ATPase OS=Xenopus laevis GN=vcp PE=1 SV=3)

HSP 1 Score: 103.99 bits (258), Expect = 2.066e-22
Identity = 47/104 (45.19%), Postives = 72/104 (69.23%), Query Frame = 2 
Query:  503 DPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMDRELF 814
            +P+    + E + +  YD IGG  +Q+ +IKE++ELP++HP LF+++G+  P+G+LLYGPPGTGKTL+ARAVA+ T   F  ++G E++ K  GE     R+ F
Sbjct:  187 EPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAF 290

HSP 2 Score: 23.8682 bits (50), Expect = 2.066e-22
Identity = 9/20 (45.00%), Postives = 15/20 (75.00%), Query Frame = 1 
Query:  805 RTFCYGREHAPSIIFMDEID 864
            + F    ++AP+IIF+DE+D
Sbjct:  288 KAFEEAEKNAPAIIFIDELD 307

HSP 3 Score: 93.9745 bits (232), Expect = 5.499e-19
Identity = 44/107 (41.12%), Postives = 67/107 (62.62%), Query Frame = 2 
Query:  494 SKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMDRELF 814
            S+ +P      V +VP  T++ IGGL+   +E++E+++ P++HP+ F   G+   KGVL YGPPG GKTLLA+A+A+     FI + G EL+  + GE     RE+F
Sbjct:  457 SQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIF 563

HSP 4 Score: 22.3274 bits (46), Expect = 5.499e-19
Identity = 8/18 (44.44%), Postives = 12/18 (66.67%), Query Frame = 1 
Query:  811 FCYGREHAPSIIFMDEID 864
            F   R+ AP ++F DE+D
Sbjct:  563 FDKARQAAPCVLFFDELD 580
[Close]
BLAST of DY305849 vs. ExPASy Swiss-Prot
Match: TERA1_CAEEL (Transitional endoplasmic reticulum ATPase homolog 1 OS=Caenorhabditis elegans GN=cdc-48.1 PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.687e-22
Identity = 48/104 (46.15%), Postives = 74/104 (71.15%), Query Frame = 2 
Query:  503 DPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMDRELF 814
            DP+    + E + D  YD +GG+ +Q+ +IKE++ELP++HP+LF+++GI  P+G+LL+GPPGTGKTL+ARAVA+ T   F  ++G E++ K  GE     R+ F
Sbjct:  193 DPIKREEEEESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAF 296

HSP 2 Score: 21.1718 bits (43), Expect = 2.687e-22
Identity = 7/13 (53.85%), Postives = 12/13 (92.31%), Query Frame = 1 
Query:  826 EHAPSIIFMDEID 864
            ++ P+I+F+DEID
Sbjct:  301 KNQPAILFIDEID 313

HSP 3 Score: 88.9669 bits (219), Expect = 3.664e-17
Identity = 39/96 (40.62%), Postives = 62/96 (64.58%), Query Frame = 2 
Query:  527 VEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMDRELF 814
            V + P++T+  IGGL    +E++E+++ P++HPE +   G+   +GVL YGPPG GKTLLA+A+A+     FI + G EL+  + GE     R++F
Sbjct:  474 VVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVF 569

HSP 4 Score: 21.1718 bits (43), Expect = 3.664e-17
Identity = 8/18 (44.44%), Postives = 11/18 (61.11%), Query Frame = 1 
Query:  811 FCYGREHAPSIIFMDEID 864
            F   R  AP ++F DE+D
Sbjct:  569 FDKARAAAPCVLFFDELD 586
[Close]
BLAST of DY305849 vs. ExPASy Swiss-Prot
Match: TERA_DROME (Transitional endoplasmic reticulum ATPase TER94 OS=Drosophila melanogaster GN=TER94 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 2.688e-22
Identity = 47/104 (45.19%), Postives = 71/104 (68.27%), Query Frame = 2 
Query:  503 DPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMDRELF 814
            DP+    + E +    YD IGG  +Q+ +IKE++ELP++HP LF+++G+  P+G+L+YGPPGTGKTL+ARAVA+ T   F  ++G E++ K  GE     R+ F
Sbjct:  184 DPIKREEEEESLNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAF 287

HSP 2 Score: 23.483 bits (49), Expect = 2.688e-22
Identity = 9/20 (45.00%), Postives = 15/20 (75.00%), Query Frame = 1 
Query:  805 RTFCYGREHAPSIIFMDEID 864
            + F    +++P+IIF+DEID
Sbjct:  285 KAFEEAEKNSPAIIFIDEID 304

HSP 3 Score: 95.5153 bits (236), Expect = 3.252e-19
Identity = 61/206 (29.61%), Postives = 99/206 (48.06%), Query Frame = 2 
Query:  197 ELQLQVRQKTHNLNRLRAHRNELNSRVRMLKE*LQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMDRELF 814
            E+ + +   T  L  LR H   +     +  E  Q+  E   +VG  +  +     L ++  E   ++             S  V + N  Y +     +K  P      V +VP++T+  IGGL+   KE++E+++ P++HP+ F   G+   +GVL YGPPG GKTLLA+A+A+     FI V G EL+  + GE     R++F
Sbjct:  363 EIDIGIPDATGRLEVLRIHTKNMKLHDDVDLE--QIAAESHGHVGADLASLCSEAALQQIR-EKMDLIDLEDDKIDAEVLASLAVTMENFRYAM-----TKSSPSALRETVVEVPNTTWTDIGGLESVKKELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIF 560

HSP 4 Score: 21.557 bits (44), Expect = 3.252e-19
Identity = 8/18 (44.44%), Postives = 11/18 (61.11%), Query Frame = 1 
Query:  811 FCYGREHAPSIIFMDEID 864
            F   R  AP ++F DE+D
Sbjct:  560 FDKARSAAPCVLFFDELD 577
[Close]
BLAST of DY305849 vs. ExPASy Swiss-Prot
Match: CDC48_YEAST (Cell division control protein 48 OS=Saccharomyces cerevisiae GN=CDC48 PE=1 SV=3)

HSP 1 Score: 101.679 bits (252), Expect = 5.914e-22
Identity = 45/88 (51.14%), Postives = 66/88 (75.00%), Query Frame = 2 
Query:  551 YDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMDRELF 814
            YD IGG  +Q+ +I+E++ELP++HP+LF+++GI  P+GVL+YGPPGTGKTL+ARAVA+ T   F  ++G E++ K  GE     R+ F
Sbjct:  213 YDDIGGCRKQMAQIREMVELPLRHPQLFKAIGIKPPRGVLMYGPPGTGKTLMARAVANETGAFFFLINGPEVMSKMAGESESNLRKAF 300

HSP 2 Score: 24.6386 bits (52), Expect = 5.914e-22
Identity = 10/20 (50.00%), Postives = 15/20 (75.00%), Query Frame = 1 
Query:  805 RTFCYGREHAPSIIFMDEID 864
            + F    ++AP+IIF+DEID
Sbjct:  298 KAFEEAEKNAPAIIFIDEID 317

HSP 3 Score: 95.1301 bits (235), Expect = 1.478e-19
Identity = 66/206 (32.04%), Postives = 98/206 (47.57%), Query Frame = 2 
Query:  197 ELQLQVRQKTHNLNRLRAHRNELNSRVRMLKE*LQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMDRELF 814
            E+ + +   T  L  LR H   +     +  E   L  E   YVG  +  +     + ++  E   ++             S  V + N  + L    PS +   V    VE V + T+D +GGLD+  +E+KE +E P+ HP+ +   G++  KGVL YGPPGTGKTLLA+AVA      FI V G EL+  + GE     R++F
Sbjct:  376 EVDIGIPDATGRLEVLRIHTKNMKLADDVDLE--ALAAETHGYVGADIASLCSEAAMQQIR-EKMDLIDLDEDEIDAEVLDSLGVTMDNFRFALGNSNPSALRETV----VESV-NVTWDDVGGLDEIKEELKETVEYPVLHPDQYTKFGLSPSKGVLFYGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDIF 573

HSP 4 Score: 23.0978 bits (48), Expect = 1.478e-19
Identity = 8/18 (44.44%), Postives = 13/18 (72.22%), Query Frame = 1 
Query:  811 FCYGREHAPSIIFMDEID 864
            F   R  AP+++F+DE+D
Sbjct:  573 FDKARAAAPTVVFLDELD 590
The following BLAST results are available for this feature:
BLAST of DY305849 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 358
Match NameE-valueIdentityDescription
TERA_RAT2.066e-2245.19Transitional endoplasmic reticulum ATPase OS=Rattu... [more]
TERA_PIG2.066e-2245.19Transitional endoplasmic reticulum ATPase OS=Sus s... [more]
TERA_MOUSE2.066e-2245.19Transitional endoplasmic reticulum ATPase OS=Mus m... [more]
TERA_HUMAN2.066e-2245.19Transitional endoplasmic reticulum ATPase OS=Homo ... [more]
TERA_BOVIN2.066e-2245.19Transitional endoplasmic reticulum ATPase OS=Bos t... [more]
TERA_XENTR2.066e-2245.19Transitional endoplasmic reticulum ATPase OS=Xenop... [more]
TERA_XENLA2.066e-2245.19Transitional endoplasmic reticulum ATPase OS=Xenop... [more]
TERA1_CAEEL2.687e-2246.15Transitional endoplasmic reticulum ATPase homolog ... [more]
TERA_DROME2.688e-2245.19Transitional endoplasmic reticulum ATPase TER94 OS... [more]
CDC48_YEAST5.914e-2251.14Cell division control protein 48 OS=Saccharomyces ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM2CD02RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305849 ID=DY305849; Name=DY305849; organism=Citrus sinensis; type=EST; length=1166bp
CTTACCCGAACGAGACTTGATCCGAAAGAAAATTAAATTCGGAAGAAATC
GAACTCGTTCACTCGGAAAGAATGGCCGCTGTAGGAATCGAAACGAAGCA
GCCGGAATCGGCGGCGCCAGAGGAGGTGTGTGCGGCGAAAGGAGCATCGA
AGACAAGGCAGAGGGATTGAGGCAATACTACCTCCAACACATTCACGAAC
TCCAGCTCCAAGTCCGTCAAAAAACCCACAATCTCAATCGCCTACGAGCC
CATCGTAACGAACTCAATTCGAGAGTGCGGATGCTTAAAGAATAATTACA
GCTTCTTCAAGAGCCTGGATCCTATGTCGGTGAAGTTGTTAAAGTTATGG
GAAAAAATAAGGTTCTTGTTAAGGTTCATCCTGAGGGGAAATATGTTGTT
GATATTGATAAAAGTATTGATATAACCAAGATCACTCCGTCAACAAGAGT
TGCACTTCGTAATGACAGCTATGTTCTTCATTTGATCCTGCCAAGCAAAG
TAGATCCCCTGGTCAACCTTATGAAGGTTGAAAAGGTCCCTGATTCTACA
TATGACATGATTGGTGGCCTTGATCAGCAAATTAAGGAGATCAAGGAGGT
CATTGAGCTTCCTATCAAACATCCCGAATTGTTCGAGTCTCTTGGAATAG
CTCAACCCAAGGGTGTATTGCTATATGGACCACCTGGTACTGGCAAAACA
CTGTTGGCTAGAGCTGTGGCTCATCATACTGATTGTACTTTCATCAGGGT
TTCTGGTTCTGAATTAGTCCAGAAATACATTGGAGAAGGCTCCAGAATGG
ATAGAGAACTTTTTGTTATGGCAGGGAACATGCTCCGTCTATCATTTTTA
TGGATGAAATTGACAGTATCGGATCTGGCCGAATGGGATCTGGCAGCGGA
AATGGTGAACGTGAGGTGCAGAGGACTAAGCTGGACCGGCCCACCAGCTT
GGATGGATTTAACCACCAACCAAAATAAGGGTCCTCGGGACGACAAAACA
ATTGGAATTTCCCAATTCAAGCTCTTCCCCGGCCCGAAACTATTTGGAGA
AAAAAATTGAATTTCCAAACCCCCACTGGAAAAAGTCCCGGCTTTGGAAT
TCCCTAAAAAATTTCTTCTCCAAAAAAAAAAGGAATTTTTATTGGGGGGG
GGCTTTTTATTTTTTT
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