DY305849
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305849 vs. ExPASy Swiss-Prot
Match: PSMR_METB6 (Proteasome-activating nucleotidase OS=Methanoregula boonei (strain 6A8) GN=pan PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 1.072e-45 Identity = 93/209 (44.50%), Postives = 124/209 (59.33%), Query Frame = 2 Query: 197 ELQLQVRQKTHNLNRLRAHRNELNSRVRMLKE*LQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMDRELFVMA 823 EL+ Q+RQ + + + VR LK + L+ P +G VV V+ N+V+V+ +++V P R L S + +LPS D V M++ P Y IGGL +QI E++E +ELP+K PELF +GI PKGVLLYGPPGTGKTLLA+AVAH T+ F+RV GSELVQKYIGEG+R+ RELF +A Sbjct: 59 ELREQIRQAEADKRYIETQKIRYEREVRKLKSESEQLRSPPLIIGTVVDVVDANRVIVRSSAGPRFLVRSSPSVNPDDIKPGARCTLNQQSLAIVELLPSSFDAQVYGMELVDSPQECYTDIGGLKEQINEVREAVELPLKRPELFTQIGIEPPKGVLLYGPPGTGKTLLAKAVAHETNAHFMRVVGSELVQKYIGEGARLVRELFDLA 267 HSP 2 Score: 35.039 bits (79), Expect = 1.072e-45 Identity = 25/75 (33.33%), Postives = 35/75 (46.67%), Query Frame = 1 Query: 811 FCYGREHAPSIIFMDEIDXXXXXXXXXXXXXXEREVQRTKLDRPTSLDGFNHQPK*GSSGRQNNWNFPIQALPRP 1035 F ++ AP+IIF+DEID +REVQRT + +DGF + G N + +AL RP Sbjct: 264 FDLAKKKAPTIIFIDEID-AVGASRTEANTSGDREVQRTLMQLLAGMDGFETRGDVKIIGATNRIDILDKALLRP 337
BLAST of DY305849 vs. ExPASy Swiss-Prot
Match: PSMR_UNCMA (Proteasome-activating nucleotidase OS=Uncultured methanogenic archaeon RC-I GN=pan PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 4.032e-45 Identity = 94/224 (41.96%), Postives = 131/224 (58.48%), Query Frame = 2 Query: 173 QYYLQHIHELQLQVRQKTHNLNRLRAHRNELNSR-------VRMLKE*LQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMDRELFVMA 823 +Y L + +L+ + + ++ + + ++ +R L L L+ P VG ++ VM K+++K K+VV P +VAL S + +LP+ DP V M+V P+ Y IGGL+ QI E+KE +ELP+ PELF+ +GI PKGVLLYGPPGTGKTLLA+AVA+ T TFIR+ GSELVQKYIGEG+RM RELF +A Sbjct: 25 KYLLDRVKQLEERNVRLKEEYRKIELEKKSVENKKVQYEREIRKLTSELDRLKTPPLIVGTILDVMANGKMIIKSSTGPKFVVNSSQFINSKEVYPGAKVALNQQSLAVIEVLPTVKDPSVLGMEVVDSPEIDYQSIGGLEAQINELKETVELPLLKPELFQKVGIEPPKGVLLYGPPGTGKTLLAKAVANRTKATFIRIIGSELVQKYIGEGARMVRELFELA 248 HSP 2 Score: 33.8834 bits (76), Expect = 4.032e-45 Identity = 20/51 (39.22%), Postives = 27/51 (52.94%), Query Frame = 1 Query: 811 FCYGREHAPSIIFMDEIDXXXXXXXXXXXXXXEREVQRTKLDRPTSLDGFN 963 F +E +PSIIF+DEID +REVQRT + +DGF+ Sbjct: 245 FELAKEKSPSIIFIDEID-SIGAKRLDSITSGDREVQRTLVQLLAEMDGFD 294
BLAST of DY305849 vs. ExPASy Swiss-Prot
Match: PRS4_RAT (26S protease regulatory subunit 4 OS=Rattus norvegicus GN=Psmc1 PE=2 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.162e-44 Identity = 80/166 (48.19%), Postives = 107/166 (64.46%), Query Frame = 2 Query: 326 VGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMDRELFVMA 823 VG + +++ N +V ++ V P V L + + + +L DPLV +MKVEK P TY IGGLD QI+EIKE +ELP+ HPE +E +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSEL+QKY+G+G ++ RELF +A Sbjct: 109 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 274 HSP 2 Score: 43.1282 bits (100), Expect = 1.162e-44 Identity = 34/92 (36.96%), Postives = 42/92 (45.65%), Query Frame = 1 Query: 811 FCYGREHAPSIIFMDEIDXXXXXXXXXXXXXXEREVQRTKLDRPTSLDGFNHQPK*GSSGRQNNWNFPIQALPRPETIWRKKLNFQTPTGKS 1086 F EHAPSI+F+DEID ERE+QRT L+ LDGF+ + N AL RP I R K+ F P K+ Sbjct: 271 FRVAEEHAPSIVFIDEID-AIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDR-KIEFPLPDEKT 360
BLAST of DY305849 vs. ExPASy Swiss-Prot
Match: PRS4_MOUSE (26S protease regulatory subunit 4 OS=Mus musculus GN=Psmc1 PE=1 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.162e-44 Identity = 80/166 (48.19%), Postives = 107/166 (64.46%), Query Frame = 2 Query: 326 VGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMDRELFVMA 823 VG + +++ N +V ++ V P V L + + + +L DPLV +MKVEK P TY IGGLD QI+EIKE +ELP+ HPE +E +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSEL+QKY+G+G ++ RELF +A Sbjct: 109 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 274 HSP 2 Score: 43.1282 bits (100), Expect = 1.162e-44 Identity = 34/92 (36.96%), Postives = 42/92 (45.65%), Query Frame = 1 Query: 811 FCYGREHAPSIIFMDEIDXXXXXXXXXXXXXXEREVQRTKLDRPTSLDGFNHQPK*GSSGRQNNWNFPIQALPRPETIWRKKLNFQTPTGKS 1086 F EHAPSI+F+DEID ERE+QRT L+ LDGF+ + N AL RP I R K+ F P K+ Sbjct: 271 FRVAEEHAPSIVFIDEID-AIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDR-KIEFPLPDEKT 360
BLAST of DY305849 vs. ExPASy Swiss-Prot
Match: PRS4_HUMAN (26S protease regulatory subunit 4 OS=Homo sapiens GN=PSMC1 PE=1 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.162e-44 Identity = 80/166 (48.19%), Postives = 107/166 (64.46%), Query Frame = 2 Query: 326 VGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMDRELFVMA 823 VG + +++ N +V ++ V P V L + + + +L DPLV +MKVEK P TY IGGLD QI+EIKE +ELP+ HPE +E +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSEL+QKY+G+G ++ RELF +A Sbjct: 109 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 274 HSP 2 Score: 43.1282 bits (100), Expect = 1.162e-44 Identity = 34/92 (36.96%), Postives = 42/92 (45.65%), Query Frame = 1 Query: 811 FCYGREHAPSIIFMDEIDXXXXXXXXXXXXXXEREVQRTKLDRPTSLDGFNHQPK*GSSGRQNNWNFPIQALPRPETIWRKKLNFQTPTGKS 1086 F EHAPSI+F+DEID ERE+QRT L+ LDGF+ + N AL RP I R K+ F P K+ Sbjct: 271 FRVAEEHAPSIVFIDEID-AIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDR-KIEFPLPDEKT 360
BLAST of DY305849 vs. ExPASy Swiss-Prot
Match: PRS4_DROME (26S protease regulatory subunit 4 OS=Drosophila melanogaster GN=Pros26.4 PE=1 SV=2) HSP 1 Score: 157.918 bits (398), Expect = 3.352e-44 Identity = 78/166 (46.99%), Postives = 107/166 (64.46%), Query Frame = 2 Query: 326 VGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMDRELFVMA 823 VG + +++ N +V ++ V P V L + + + +L DP+V +MK+EK P TY IGGLD QI+EIKE +ELP+ HPE +E +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSEL+QKY+G+G ++ RELF +A Sbjct: 108 VGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 273 HSP 2 Score: 43.1282 bits (100), Expect = 3.352e-44 Identity = 34/92 (36.96%), Postives = 42/92 (45.65%), Query Frame = 1 Query: 811 FCYGREHAPSIIFMDEIDXXXXXXXXXXXXXXEREVQRTKLDRPTSLDGFNHQPK*GSSGRQNNWNFPIQALPRPETIWRKKLNFQTPTGKS 1086 F EHAPSI+F+DEID ERE+QRT L+ LDGF+ + N AL RP I R K+ F P K+ Sbjct: 270 FRVAEEHAPSIVFIDEID-AVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDR-KIEFPLPDEKT 359
BLAST of DY305849 vs. ExPASy Swiss-Prot
Match: PSMR_METHJ (Proteasome-activating nucleotidase OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=pan PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 4.372e-44 Identity = 88/209 (42.11%), Postives = 122/209 (58.37%), Query Frame = 2 Query: 197 ELQLQVRQKTHNLNRLRAHRNELNSRVRMLKE*LQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMDRELFVMA 823 EL+ Q+RQ + + + VR LK ++ L+ P VG + ++ +V+V+ +++V R L S + +LPS D V M++ P TY+ IGGL++QI EI+E +ELP+ P+LFE +GI PKGVLLYGPPGTGKTLLA+AVAH T F+ GSELVQKYIGEG+R+ RELF +A Sbjct: 34 ELKEQIRQLESDKRYIETQKIRYEREVRKLKSEIEHLKTPPLIVGTITDIIDSGRVVVRSSAGPRFLVRVSQAVNPTTLKAGVRCTLNQQSLAIVEVLPSTYDSQVYGMELVDAPTETYEDIGGLEKQIMEIREAVELPMTRPDLFEKIGINPPKGVLLYGPPGTGKTLLAKAVAHETHAIFLHTVGSELVQKYIGEGARLVRELFDLA 242 HSP 2 Score: 36.965 bits (84), Expect = 4.372e-44 Identity = 26/75 (34.67%), Postives = 35/75 (46.67%), Query Frame = 1 Query: 811 FCYGREHAPSIIFMDEIDXXXXXXXXXXXXXXEREVQRTKLDRPTSLDGFNHQPK*GSSGRQNNWNFPIQALPRP 1035 F +E APSI+F+DEID +REVQRT + ++DGF + G N + AL RP Sbjct: 239 FDLAKEKAPSIVFIDEID-AIGASRTEAMTSGDREVQRTLMQLLAAMDGFEPRGDVKIIGATNRIDILDAALLRP 312
BLAST of DY305849 vs. ExPASy Swiss-Prot
Match: PRS4_CHICK (26S protease regulatory subunit 4 OS=Gallus gallus GN=PSMC1 PE=2 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 7.418e-44 Identity = 79/166 (47.59%), Postives = 107/166 (64.46%), Query Frame = 2 Query: 326 VGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMDRELFVMA 823 VG + +++ N +V ++ V P V L + + + +L DPLV +MK+EK P TY IGGLD QI+EIKE +ELP+ HPE +E +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSEL+QKY+G+G ++ RELF +A Sbjct: 109 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKLEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 274 HSP 2 Score: 41.5874 bits (96), Expect = 7.418e-44 Identity = 33/92 (35.87%), Postives = 41/92 (44.57%), Query Frame = 1 Query: 811 FCYGREHAPSIIFMDEIDXXXXXXXXXXXXXXEREVQRTKLDRPTSLDGFNHQPK*GSSGRQNNWNFPIQALPRPETIWRKKLNFQTPTGKS 1086 F EH PSI+F+DEID ERE+QRT L+ LDGF+ + N AL RP I R K+ F P K+ Sbjct: 271 FRVAEEHGPSIVFIDEID-AIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDR-KIEFPLPDEKT 360
BLAST of DY305849 vs. ExPASy Swiss-Prot
Match: PSMR_METJA (Proteasome-activating nucleotidase OS=Methanocaldococcus jannaschii GN=pan PE=1 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 7.420e-44 Identity = 88/211 (41.71%), Postives = 129/211 (61.14%), Query Frame = 2 Query: 191 IHELQLQVRQKTHNLNRLRAHRNELNSRVRMLKE*LQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMDRELFVMA 823 I EL+ ++ + L +L +L+ L ++ P VG VV +G+ KV+VK ++V P RV L + + +LP D M+V++ P+ Y+ IGGL++Q++EI+EV+ELP+KHPELFE +GI PKG+LLYGPPGTGKTLLA+AVA T+ TFIRV GSELV+K+IGEG+ + +++F +A Sbjct: 49 IAELESRILKLELEKKELERENLQLMKENEILRRELDRMRVPPLIVGTVVDKVGERKVVVKSSTGPSFLVNVSHFVNPDDLAPGKRVCLNQQTLTVVDVLPENKDYRAKAMEVDERPNVRYEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKTLLAKAVATETNATFIRVVGSELVKKFIGEGASLVKDIFKLA 259 HSP 2 Score: 36.1946 bits (82), Expect = 7.420e-44 Identity = 26/75 (34.67%), Postives = 35/75 (46.67%), Query Frame = 1 Query: 811 FCYGREHAPSIIFMDEIDXXXXXXXXXXXXXXEREVQRTKLDRPTSLDGFNHQPK*GSSGRQNNWNFPIQALPRP 1035 F +E APSIIF+DEID +REVQRT + +DGF+ + G N + A+ RP Sbjct: 256 FKLAKEKAPSIIFIDEID-AIAAKRTDALTGGDREVQRTLMQLLAEMDGFDARGDVKIIGATNRPDILDPAILRP 329
BLAST of DY305849 vs. ExPASy Swiss-Prot
Match: PRS10_CAEEL (Probable 26S protease regulatory subunit S10B OS=Caenorhabditis elegans GN=rpt-4 PE=1 SV=2) HSP 1 Score: 158.303 bits (399), Expect = 9.676e-44 Identity = 91/223 (40.81%), Postives = 130/223 (58.30%), Query Frame = 2 Query: 146 IEDKAEGLRQYYLQHIHELQLQVRQKTHNLNRLRAHRNELNSRVRMLKE*LQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMDRELF 814 +ED+ Y + + E + + QK L LR +E+ + + ++ LQ G VGEV+K + + K +VK +YVV TRV+L + + LP +VDPLV M E + +Y +GGL +QI+E++EV+ELP+ +PELF+ +GI PKG LL+GPPGTGKTLLARAVA DC F++V S +V KYIGE +RM RE+F Sbjct: 18 VEDERTKALNSYRRKLAECR-DIEQK---LKDLRKKESEMTKQFDKSENDIKSLQSVGQIVGEVLKQLSEEKFIVKATNGPRYVVGCRRSINKEELKQGTRVSLDMTTLTIMRQLPREVDPLVYKMSHEDPGNISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQLDCNFLKVVSSAIVDKYIGESARMIREMF 236 HSP 2 Score: 41.2022 bits (95), Expect = 9.676e-44 Identity = 29/81 (35.80%), Postives = 38/81 (46.91%), Query Frame = 1 Query: 811 FCYGREHAPSIIFMDEIDXXXXXXXXXXXXXXEREVQRTKLDRPTSLDGFNHQPK*GSSGRQNNWNFPIQALPRPETIWRK 1053 F Y R+H P I+FMDEID +RE+QRT ++ LDGF+ K N + AL RP + RK Sbjct: 236 FNYARDHQPCIVFMDEID-AIGGRRFSEGTSADREIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRK 315 The following BLAST results are available for this feature:
BLAST of DY305849 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 358
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY305849 ID=DY305849; Name=DY305849; organism=Citrus sinensis; type=EST; length=1166bpback to top |