DY305849
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305849 vs. ExPASy Swiss-Prot
Match: FIGN_HUMAN (Fidgetin OS=Homo sapiens GN=FIGN PE=2 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 2.288e-11 Identity = 37/95 (38.95%), Postives = 55/95 (57.89%), Query Frame = 2 Query: 539 PDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMDRELFVMA 823 P ++ I GLD IKE + P+ + F L A P+ +LL+GP GTGKTLL R +A TF +++GS LV K++GE ++ F++A Sbjct: 481 PPVDWNDIAGLDLVKAVIKEEVLWPVLRSDAFSGL-TALPRSILLFGPRGTGKTLLGRCIASQLGATFFKIAGSGLVAKWLGEAEKIIHASFLVA 574 HSP 2 Score: 20.7866 bits (42), Expect = 2.288e-11 Identity = 8/19 (42.11%), Postives = 12/19 (63.16%), Query Frame = 1 Query: 808 TFCYGREHAPSIIFMDEID 864 +F R PS+IF+ +ID Sbjct: 570 SFLVARCRQPSVIFVSDID 588
BLAST of DY305849 vs. ExPASy Swiss-Prot
Match: SPG7_RAT (Paraplegin OS=Rattus norvegicus GN=Spg7 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 2.289e-11 Identity = 36/89 (40.45%), Postives = 52/89 (58.43%), Query Frame = 2 Query: 548 TYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMDRELF 814 ++ + G+ + E++E ++ +K PE F LG PKG LL GPPG GKTLLA+AVA F+ ++G E V+ G G+ R LF Sbjct: 307 SFQDVAGMHEAKLEVREFVDY-LKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFVEVIGGLGAARVRSLF 394 HSP 2 Score: 22.7126 bits (47), Expect = 2.289e-11 Identity = 9/18 (50.00%), Postives = 12/18 (66.67%), Query Frame = 1 Query: 811 FCYGREHAPSIIFMDEID 864 F R AP I+++DEID Sbjct: 394 FKEARARAPCIVYIDEID 411
BLAST of DY305849 vs. ExPASy Swiss-Prot
Match: NSF2_DROME (Vesicle-fusing ATPase 2 OS=Drosophila melanogaster GN=Nsf2 PE=2 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 2.848e-11 Identity = 39/90 (43.33%), Postives = 53/90 (58.89%), Query Frame = 2 Query: 560 IGGLDQQIKEI-KEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR-VSGSELVQKYIGEGSRMDRELFVMA 823 IGGLD++ I + + PEL E LGI KG+LLYGPPGTGKTL+AR + + + V+G +++ KY+GE R LF A Sbjct: 225 IGGLDKEFNAIFRRAFASRVFPPELVEQLGIKHVKGILLYGPPGTGKTLMARQIGTMLNAREPKIVNGPQILDKYVGESEANIRRLFAEA 314
BLAST of DY305849 vs. ExPASy Swiss-Prot
Match: FIGN_DANRE (Fidgetin OS=Danio rerio GN=fign PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.848e-11 Identity = 35/88 (39.77%), Postives = 54/88 (61.36%), Query Frame = 2 Query: 560 IGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMDRELFVMA 823 I GL+ IK+ + PI P++F L P+ +LL+GP GTG+TLL R +A F+ +SGS LV K++GEG ++ + F++A Sbjct: 466 IAGLEMAKATIKDEVLWPILRPDMFSGLATL-PRSILLFGPQGTGRTLLGRCMASQLGAAFLLLSGSALVTKWLGEGEKIVQASFLIA 552
BLAST of DY305849 vs. ExPASy Swiss-Prot
Match: SPG7_HUMAN (Paraplegin OS=Homo sapiens GN=SPG7 PE=1 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 2.966e-11 Identity = 36/85 (42.35%), Postives = 50/85 (58.82%), Query Frame = 2 Query: 560 IGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMDRELF 814 + G+ + E++E ++ +K PE F LG PKG LL GPPG GKTLLA+AVA F+ ++G E V+ G G+ R LF Sbjct: 311 VAGMHEAKLEVREFVDY-LKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFVEVIGGLGAARVRSLF 394 HSP 2 Score: 22.7126 bits (47), Expect = 2.966e-11 Identity = 9/18 (50.00%), Postives = 12/18 (66.67%), Query Frame = 1 Query: 811 FCYGREHAPSIIFMDEID 864 F R AP I+++DEID Sbjct: 394 FKEARARAPCIVYIDEID 411
BLAST of DY305849 vs. ExPASy Swiss-Prot
Match: PEX1_SCHPO (Peroxisomal ATPase pex1 OS=Schizosaccharomyces pombe GN=pex1 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 4.858e-11 Identity = 32/88 (36.36%), Postives = 54/88 (61.36%), Query Frame = 2 Query: 560 IGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMDRELFVMA 823 I G+ + + ++++IE P+K+ +++ + P G+LL+G PG GKT LA A++ FI + G EL+ KYIG+ + R+LF A Sbjct: 608 IAGMQEAKEAVRDIIESPVKYSLIYKQCRLRLPTGILLFGYPGCGKTYLASAISSTFPVQFISIKGPELLDKYIGKSEQGVRDLFSRA 695
BLAST of DY305849 vs. ExPASy Swiss-Prot
Match: PEX1_YEAST (Peroxisomal ATPase PEX1 OS=Saccharomyces cerevisiae GN=PEX1 PE=1 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 8.286e-11 Identity = 39/101 (38.61%), Postives = 54/101 (53.47%), Query Frame = 2 Query: 521 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMDRELFVMA 823 +K+ K + + IG L + E +E P K+ +F + + G+LLYG PG GKTLLA AVA FI V G E++ K+IG + RELF A Sbjct: 686 VKLTKETNIKWGDIGALANAKDVLLETLEWPTKYEPIFVNCPLRLRSGILLYGYPGCGKTLLASAVAQQCGLNFISVKGPEILNKFIGASEQNIRELFERA 786
BLAST of DY305849 vs. ExPASy Swiss-Prot
Match: NSF1_DROME (Vesicle-fusing ATPase 1 OS=Drosophila melanogaster GN=comt PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 8.286e-11 Identity = 38/90 (42.22%), Postives = 52/90 (57.78%), Query Frame = 2 Query: 560 IGGLDQQIKEI-KEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR-VSGSELVQKYIGEGSRMDRELFVMA 823 IGGLD++ I + + PEL E LG KG+LLYGPPGTGKTL+AR + + + V+G +++ KY+GE R LF A Sbjct: 220 IGGLDKEFNSIFRRAFASRVFPPELVEQLGCKHVKGILLYGPPGTGKTLMARQIGTMLNAREPKIVNGPQILDKYVGESEANVRRLFAEA 309 The following BLAST results are available for this feature:
BLAST of DY305849 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 358
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305849 ID=DY305849; Name=DY305849; organism=Citrus sinensis; type=EST; length=1166bpback to top |