DY305837

Overview
NameDY305837
Unique NameDY305837
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1197
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305837 vs. ExPASy Swiss-Prot
Match: TAL_MYCTA (Transaldolase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=tal PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 2.034e-44
Identity = 98/211 (46.45%), Postives = 145/211 (68.72%), Query Frame = 1
Query:  280 GQSPWYDNLCRPVT---DLLPLI-ASGVRGVTSNPAIFQKAISSSNAYNDQFRELVQSGKDIEAAYWELVIKDIQDACKLFESIYDETNGGDGYVSVEVSPRLADDTQGTVEAAKWLHKVVNRPNVYIKIPATAPCVPSIKEVISQGISVNVTLIFSLARYEEVIDAYLDGLEASGLS--DLSRVTSVASFFVNRVDTLLDKCLEKLGTQK 894
            G S W D+L R      +L  LI    V GVT+NP+IFQKA+S  + Y+ Q  EL   G D++A    +   D++ AC +    +++++G DG VS+EV PRLA +T+ T++ A  L K+V+RPN++IKIPAT   +P+I  V+++GISVNVTLIFS+ RY EV+DAYL G+E +  +   LS++ SVASFFV+RVDT +DK L+++G+++
Sbjct:   15 GVSVWLDDLSRDRLRSGNLQELIDTKSVVGVTTNPSIFQKALSEGHTYDAQIAELAARGADVDATIRTVTTDDVRSACDVLVPQWEDSDGVDGRVSIEVDPRLAHETEKTIQQAIELWKIVDRPNLFIKIPATKAGLPAISAVLAEGISVNVTLIFSVQRYREVMDAYLTGMEKARQAGHSLSKIHSVASFFVSRVDTEIDKRLDRIGSRQ 225          
BLAST of DY305837 vs. ExPASy Swiss-Prot
Match: TAL_MYCPA (Transaldolase OS=Mycobacterium paratuberculosis GN=tal PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 2.034e-44
Identity = 101/211 (47.87%), Postives = 143/211 (67.77%), Query Frame = 1
Query:  280 GQSPWYDNLCRPVT---DLLPLIASG-VRGVTSNPAIFQKAISSSNAYNDQFRELVQSGKDIEAAYWELVIKDIQDACKLFESIYDETNGGDGYVSVEVSPRLADDTQGTVEAAKWLHKVVNRPNVYIKIPATAPCVPSIKEVISQGISVNVTLIFSLARYEEVIDAYLDGLEASGLS--DLSRVTSVASFFVNRVDTLLDKCLEKLGTQK 894
            G S W D+L R      +L  LI +  V GVT+NP+IFQKA +  +AY+ Q  EL   G D++A    +   D+++AC +    ++ ++G DG VS+EV PRLA DT  T+  A  L K+V+RPN++IKIPAT   +P+I  V+++GISVNVTLIFS+ RY  V+DAYL G+E +  +  DLS++ SVASFFV+RVDT +DK LEK+G ++
Sbjct:   15 GVSVWLDDLSRDRLRSGNLQELIDTKCVVGVTTNPSIFQKAFAEGHAYDSQIAELAARGADVDATIRTVTTDDVRNACDVLTREWENSDGVDGRVSIEVDPRLAGDTDKTIAQAVELWKIVDRPNLFIKIPATQAGLPAITAVLAEGISVNVTLIFSVERYRAVMDAYLAGMEKAREAGHDLSKIHSVASFFVSRVDTEIDKRLEKIGGER 225          
BLAST of DY305837 vs. ExPASy Swiss-Prot
Match: TAL_MYCBT (Transaldolase OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=tal PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 2.034e-44
Identity = 98/211 (46.45%), Postives = 145/211 (68.72%), Query Frame = 1
Query:  280 GQSPWYDNLCRPVT---DLLPLI-ASGVRGVTSNPAIFQKAISSSNAYNDQFRELVQSGKDIEAAYWELVIKDIQDACKLFESIYDETNGGDGYVSVEVSPRLADDTQGTVEAAKWLHKVVNRPNVYIKIPATAPCVPSIKEVISQGISVNVTLIFSLARYEEVIDAYLDGLEASGLS--DLSRVTSVASFFVNRVDTLLDKCLEKLGTQK 894
            G S W D+L R      +L  LI    V GVT+NP+IFQKA+S  + Y+ Q  EL   G D++A    +   D++ AC +    +++++G DG VS+EV PRLA +T+ T++ A  L K+V+RPN++IKIPAT   +P+I  V+++GISVNVTLIFS+ RY EV+DAYL G+E +  +   LS++ SVASFFV+RVDT +DK L+++G+++
Sbjct:   15 GVSVWLDDLSRDRLRSGNLQELIDTKSVVGVTTNPSIFQKALSEGHTYDAQIAELAARGADVDATIRTVTTDDVRSACDVLVPQWEDSDGVDGRVSIEVDPRLAHETEKTIQQAIELWKIVDRPNLFIKIPATKAGLPAISAVLAEGISVNVTLIFSVQRYREVMDAYLTGMEKARQAGHSLSKIHSVASFFVSRVDTEIDKRLDRIGSRQ 225          
BLAST of DY305837 vs. ExPASy Swiss-Prot
Match: TAL_MYCBP (Transaldolase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=tal PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 2.034e-44
Identity = 98/211 (46.45%), Postives = 145/211 (68.72%), Query Frame = 1
Query:  280 GQSPWYDNLCRPVT---DLLPLI-ASGVRGVTSNPAIFQKAISSSNAYNDQFRELVQSGKDIEAAYWELVIKDIQDACKLFESIYDETNGGDGYVSVEVSPRLADDTQGTVEAAKWLHKVVNRPNVYIKIPATAPCVPSIKEVISQGISVNVTLIFSLARYEEVIDAYLDGLEASGLS--DLSRVTSVASFFVNRVDTLLDKCLEKLGTQK 894
            G S W D+L R      +L  LI    V GVT+NP+IFQKA+S  + Y+ Q  EL   G D++A    +   D++ AC +    +++++G DG VS+EV PRLA +T+ T++ A  L K+V+RPN++IKIPAT   +P+I  V+++GISVNVTLIFS+ RY EV+DAYL G+E +  +   LS++ SVASFFV+RVDT +DK L+++G+++
Sbjct:   15 GVSVWLDDLSRDRLRSGNLQELIDTKSVVGVTTNPSIFQKALSEGHTYDAQIAELAARGADVDATIRTVTTDDVRSACDVLVPQWEDSDGVDGRVSIEVDPRLAHETEKTIQQAIELWKIVDRPNLFIKIPATKAGLPAISAVLAEGISVNVTLIFSVQRYREVMDAYLTGMEKARQAGHSLSKIHSVASFFVSRVDTEIDKRLDRIGSRQ 225          
BLAST of DY305837 vs. ExPASy Swiss-Prot
Match: TAL_MYCBO (Transaldolase OS=Mycobacterium bovis GN=tal PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 2.034e-44
Identity = 98/211 (46.45%), Postives = 145/211 (68.72%), Query Frame = 1
Query:  280 GQSPWYDNLCRPVT---DLLPLI-ASGVRGVTSNPAIFQKAISSSNAYNDQFRELVQSGKDIEAAYWELVIKDIQDACKLFESIYDETNGGDGYVSVEVSPRLADDTQGTVEAAKWLHKVVNRPNVYIKIPATAPCVPSIKEVISQGISVNVTLIFSLARYEEVIDAYLDGLEASGLS--DLSRVTSVASFFVNRVDTLLDKCLEKLGTQK 894
            G S W D+L R      +L  LI    V GVT+NP+IFQKA+S  + Y+ Q  EL   G D++A    +   D++ AC +    +++++G DG VS+EV PRLA +T+ T++ A  L K+V+RPN++IKIPAT   +P+I  V+++GISVNVTLIFS+ RY EV+DAYL G+E +  +   LS++ SVASFFV+RVDT +DK L+++G+++
Sbjct:   15 GVSVWLDDLSRDRLRSGNLQELIDTKSVVGVTTNPSIFQKALSEGHTYDAQIAELAARGADVDATIRTVTTDDVRSACDVLVPQWEDSDGVDGRVSIEVDPRLAHETEKTIQQAIELWKIVDRPNLFIKIPATKAGLPAISAVLAEGISVNVTLIFSVQRYREVMDAYLTGMEKARQAGHSLSKIHSVASFFVSRVDTEIDKRLDRIGSRQ 225          
BLAST of DY305837 vs. ExPASy Swiss-Prot
Match: TAL_LEIXX (Transaldolase OS=Leifsonia xyli subsp. xyli GN=tal PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 2.034e-44
Identity = 126/290 (43.45%), Postives = 160/290 (55.17%), Query Frame = 1
Query:  292 WYDNLCRPVT---DLLPLIAS-GVRGVTSNPAIFQKAISSSNAYNDQFRELVQSGKDIEAAYWELVIKDIQDACKLFESIYDETNGGDGYVSVEVSPRLADDTQGTVEAAKWLHKVVNRPNVYIKIPATAPCVPSIKEVISQGISVNVTLIFSLARYEEVIDAYLDGLE---ASGLSDLSRVTSVASFFVNRVDTLLDKCLEKLGTQKP*ISEEKQQYLRQL*PTTCTQKNFRGPEGDPLGKKGAKKTKNFGWPSTHGKKIRAKPDTSLYVCSLFIETLKKGFQPLPQKT 1140
            W D+L R       L  LIA   V GVT+NP IF  A++   AY++Q R L  +G  +E A +E+   D+ DA  +F  +Y  T G DG VS+EV P LA D   T+  AK L   V+RPNV IKIPAT   + +I E I+ GISVNVTLIFSL RY  VIDAYL GLE   A+G+ DLS + SVASFFV+RVDT +DK L  +GT +    + K             ++ F G     L   GA + +   W ST G K  + PDT LYV  L           +P+KT
Sbjct:   23 WLDDLSRERIASGGLQRLIAEKNVVGVTTNPTIFAAALAQGAAYDEQVRGLAATGVSVEDAIFEITTDDVADASDIFHDVYTATGGVDGRVSIEVEPGLAHDAAATIAEAKRLAAKVDRPNVLIKIPATVEGLEAITETIAAGISVNVTLIFSLERYRGVIDAYLTGLEKAKAAGI-DLSGIQSVASFFVSRVDTEIDKRLTAIGTGEALALKSKAGIANARLAYKVYEEAFAGDRAKALVAAGANEQRPL-WAST-GVKDPSLPDT-LYVTEL---VAPNTVNTMPEKT 305          
BLAST of DY305837 vs. ExPASy Swiss-Prot
Match: TAL_MYCLE (Transaldolase OS=Mycobacterium leprae GN=tal PE=3 SV=2)

HSP 1 Score: 179.489 bits (454), Expect = 3.469e-44
Identity = 100/211 (47.39%), Postives = 142/211 (67.30%), Query Frame = 1
Query:  280 GQSPWYDNLCRPVT---DLLPLI-ASGVRGVTSNPAIFQKAISSSNAYNDQFRELVQSGKDIEAAYWELVIKDIQDACKLFESIYDETNGGDGYVSVEVSPRLADDTQGTVEAAKWLHKVVNRPNVYIKIPATAPCVPSIKEVISQGISVNVTLIFSLARYEEVIDAYLDGLE--ASGLSDLSRVTSVASFFVNRVDTLLDKCLEKLGTQK 894
            G S W D+L R      +L  LI    V GVT+NP+IFQKA ++ +AY+ Q  EL + G +++     +   D++ AC +    ++ ++G DG VS+EV PRLA DT  T+  A  L ++V+ PN++IKIPAT   +P+I  V+++GISVNVTLIFS+ R+ EVIDAYL G+E  A    DLS++ SVASFFV+RVDT +DK LEKLG+++
Sbjct:   17 GVSVWLDDLSRDRLQSGNLQKLIDTKSVVGVTTNPSIFQKAFANGHAYDAQIAELAKRGANVDVTVRTVTTDDVRHACDVLACEWEASHGKDGRVSIEVDPRLAHDTDKTIAQAVELWRIVDHPNLFIKIPATKAGLPAITAVLAEGISVNVTLIFSVQRHREVIDAYLAGIEKAAEAGRDLSKIVSVASFFVSRVDTEIDKRLEKLGSEQ 227          
BLAST of DY305837 vs. ExPASy Swiss-Prot
Match: TAL_MYCLB (Transaldolase OS=Mycobacterium leprae (strain Br4923) GN=tal PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 3.469e-44
Identity = 100/211 (47.39%), Postives = 142/211 (67.30%), Query Frame = 1
Query:  280 GQSPWYDNLCRPVT---DLLPLI-ASGVRGVTSNPAIFQKAISSSNAYNDQFRELVQSGKDIEAAYWELVIKDIQDACKLFESIYDETNGGDGYVSVEVSPRLADDTQGTVEAAKWLHKVVNRPNVYIKIPATAPCVPSIKEVISQGISVNVTLIFSLARYEEVIDAYLDGLE--ASGLSDLSRVTSVASFFVNRVDTLLDKCLEKLGTQK 894
            G S W D+L R      +L  LI    V GVT+NP+IFQKA ++ +AY+ Q  EL + G +++     +   D++ AC +    ++ ++G DG VS+EV PRLA DT  T+  A  L ++V+ PN++IKIPAT   +P+I  V+++GISVNVTLIFS+ R+ EVIDAYL G+E  A    DLS++ SVASFFV+RVDT +DK LEKLG+++
Sbjct:   17 GVSVWLDDLSRDRLQSGNLQKLIDTKSVVGVTTNPSIFQKAFANGHAYDAQIAELAKRGANVDVTVRTVTTDDVRHACDVLACEWEASHGKDGRVSIEVDPRLAHDTDKTIAQAVELWRIVDHPNLFIKIPATKAGLPAITAVLAEGISVNVTLIFSVQRHREVIDAYLAGIEKAAEAGRDLSKIVSVASFFVSRVDTEIDKRLEKLGSEQ 227          
BLAST of DY305837 vs. ExPASy Swiss-Prot
Match: TAL2_STRAW (Transaldolase 2 OS=Streptomyces avermitilis GN=tal2 PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 3.469e-44
Identity = 108/212 (50.94%), Postives = 141/212 (66.51%), Query Frame = 1
Query:  274 QEGQSPWYDNLCRP-VT--DLLPLI-ASGVRGVTSNPAIFQKAISSSNAYNDQFRELVQSGKDIEAAYWELVIKDIQDACKLFESIYDETNGGDGYVSVEVSPRLADDTQGTVEAAKWLHKVVNRPNVYIKIPATAPCVPSIKEVISQGISVNVTLIFSLARYEEVIDAYLDGLEAS---GLSDLSRVTSVASFFVNRVDTLLDKCLEKLGT 888
            +EG + W D+L R  +T  +L  LI    V GVT+NP+IFQKAIS  + Y+ Q  +L      +E A   +   D++DA  +   ++D T+G DG VS+EV PRLA +T+ TV  AK L  +V+RPN  IKIPAT   +P+I EVI  GISVNVTLIFSL RY  V+DAYL GLE +   GL DLS++ SVASFFV+RVDT +DK ++ LGT
Sbjct:   10 KEGVAIWLDDLSRKRITSGNLAELIDQQHVVGVTTNPSIFQKAISQGDGYDQQVSDLAARRVTVEEAIRMITTADVRDAADILRPVFDATDGQDGRVSIEVDPRLAHNTKATVAEAKQLAWLVDRPNTLIKIPATKAGIPAITEVIGLGISVNVTLIFSLERYRMVMDAYLAGLEKAKERGL-DLSKIHSVASFFVSRVDTEIDKRIDALGT 220          
BLAST of DY305837 vs. ExPASy Swiss-Prot
Match: TAL1_STRCO (Transaldolase 1 OS=Streptomyces coelicolor GN=tal1 PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 5.917e-44
Identity = 106/213 (49.77%), Postives = 138/213 (64.79%), Query Frame = 1
Query:  277 EGQSPWYDNLCRPVTD---LLPLIAS-GVRGVTSNPAIFQKAISSSNAYNDQFRELVQSGKDIEAAYWELVIKDIQDACKLFESIYDETNGGDGYVSVEVSPRLADDTQGTVEAAKWLHKVVNRPNVYIKIPATAPCVPSIKEVISQGISVNVTLIFSLARYEEVIDAYLDGLE---ASGLSDLSRVTSVASFFVNRVDTLLDKCLEKLGTQK 894
            +G S W D+L R   +   L  LI +  V GVT+NP+IFQ AI S   Y +Q  +L   G  ++ A   +   D++ A  +   +YD + G DG VS+EV PRLA DT  TV  A+ L  +V+RPNV IKIPAT   +P+I EVI  GISVNVTLIFSL RY EV+DAYL GLE   A+G+ DL+ + SVASFFV+RVD+ +DK L  LGT++
Sbjct:   20 QGVSVWLDDLSRRRIESGNLAELIRTKNVVGVTTNPSIFQAAIGSGEGYEEQLADLATRGVTVDEAVRMMTTADVRAAADVLRGVYDASGGRDGRVSIEVDPRLAHDTAATVAEARQLSWLVDRPNVMIKIPATKAGLPAITEVIGAGISVNVTLIFSLERYREVMDAYLAGLEKAQAAGI-DLAGIHSVASFFVSRVDSEIDKRLSLLGTEE 231          
The following BLAST results are available for this feature:
BLAST of DY305837 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
TAL_MYCTA2.034e-4446.45Transaldolase OS=Mycobacterium tuberculosis (strai... [more]
TAL_MYCPA2.034e-4447.87Transaldolase OS=Mycobacterium paratuberculosis GN... [more]
TAL_MYCBT2.034e-4446.45Transaldolase OS=Mycobacterium bovis (strain BCG /... [more]
TAL_MYCBP2.034e-4446.45Transaldolase OS=Mycobacterium bovis (strain BCG /... [more]
TAL_MYCBO2.034e-4446.45Transaldolase OS=Mycobacterium bovis GN=tal PE=3 S... [more]
TAL_LEIXX2.034e-4443.45Transaldolase OS=Leifsonia xyli subsp. xyli GN=tal... [more]
TAL_MYCLE3.469e-4447.39Transaldolase OS=Mycobacterium leprae GN=tal PE=3 ... [more]
TAL_MYCLB3.469e-4447.39Transaldolase OS=Mycobacterium leprae (strain Br49... [more]
TAL2_STRAW3.469e-4450.94Transaldolase 2 OS=Streptomyces avermitilis GN=tal... [more]
TAL1_STRCO5.917e-4449.77Transaldolase 1 OS=Streptomyces coelicolor GN=tal1... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM2CB07RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305837 ID=DY305837; Name=DY305837; organism=Citrus sinensis; type=EST; length=1197bp
GCAAGGATCAACGAGTCTTTAATGGCGACCATTTCGAAGCTTACAAATCC
AGCTGTTTCTTCATCATCTTTGAAACCCAGATCATCATCATCCTCACTGC
CTAAATCTTTGATCAGCCTTCAAACCAAAACTGGGTTCAATTCAAAAGTT
GCATCTTCTCAGTTGACCCTCAGAAATAACCACCCTTTGAAGGCCTCTTT
GGTTGTGAAATGTTCCCAATCTGGTGGAAATGGAAGTAGTGCAAAGAGGA
CAACTCTTCATGATCTCTATGAGCAGGAAGGGCAGAGCCCTTGGTATGAT
AACCTTTGCCGCCCCGTCACAGATTTGCTTCCGCTCATTGCAAGTGGTGT
TAGAGGTGTTACCAGCAACCCTGCGATTTTCCAGAAAGCAATATCTTCAT
CGAATGCTTACAATGATCAATTTAGGGAACTTGTACAATCTGGAAAAGAT
ATTGAAGCTGCATATTGGGAACTTGTGATTAAGGACATTCAAGATGCATG
CAAACTTTTTGAGTCAATCTATGATGAAACCAATGGCGGTGATGGCTATG
TTTCTGTCGAAGTTTCTCCCAGACTCGCTGATGATACCCAAGGGACTGTG
GAGGCAGCAAAATGGCTTCACAAAGTGGTTAATCGCCCCAATGTATACAT
AAAGATACCTGCCACAGCTCCTTGCGTTCCTTCTATCAAGGAAGTTATTT
CGCAGGGCATTAGTGTCAATGTGACTCTCATATTCTCCCTGGCTAGATAT
GAAGAAGTCATTGATGCTTACTTGGATGGCCTTGAGGCTTCTGGGCTGAG
TGACCTTTCCAGAGTTACAAGTGTTGCATCCTTTTTCGTTAATCGAGTAG
ACACCCTATTGGACAAATGCTTGGAAAAATTGGGAACCCAGAAACCCTAA
ATCTCCGAGGAAAAGCAACAATACCTCAGGCAACTCTAGCCTACCACCTG
TACCCAAAAAAATTTCCGGGGTCCAGAAGGGGACCCTCTTGGGAAAAAAG
GTGCCAAAAAAACAAAAAACTTCGGGTGGCCCTCAACCCATGGAAAAAAA
ATCCGGGCCAAACCCGACACCTCCCTATATGTTTGCTCCCTTTTCATTGA
AACACTAAAAAAGGGTTTTCAACCCCTGCCCCAAAAAACCACCCCCCCCC
CACACCATTTTTTTTTTTTAAATATTTGGGGGGGGCCCAATTTTTCT
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