DY305814

Overview
NameDY305814
Unique NameDY305814
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1261
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY305814 vs. ExPASy Swiss-Prot
Match: YJJN_ECOLI (Uncharacterized zinc-type alcohol dehydrogenase-like protein yjjN OS=Escherichia coli (strain K12) GN=yjjN PE=3 SV=3)

HSP 1 Score: 68.5514 bits (166), Expect = 9.201e-11
Identity = 31/99 (31.31%), Postives = 52/99 (52.53%), Query Frame = 2 
Query:  101 KPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRI 397
            K LV ++ E+  P  NE  +KI    +C TD++ W        +PR+ GHE  G +  +G+ + DL+ G  V  +    C++CP C S  +N C+ + +
Sbjct:   13 KELVWKQREIPIPGDNEALIKIKSVGICGTDIHAWGGNQPFFSYPRVLGHEICGEIVGLGKNIADLKNGQQVAVIPYVACQQCPACKSGRTNCCEKISV 111
[Close]
BLAST of DY305814 vs. ExPASy Swiss-Prot
Match: ADH1_ANAPL (Alcohol dehydrogenase 1 (Fragment) OS=Anas platyrhynchos GN=ADH1 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 9.201e-11
Identity = 35/106 (33.02%), Postives = 54/106 (50.94%), Query Frame = 2 
Query:  623 KGQTVAIFXXXXXXXXXXXXXRVSXASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQXVIAEMTNGGVDRSVECTWSVPGMISTFECVPQGWGCCRALGVGP 940
            +G T A+F             + + ASRII VD+N  +F +AK+ G T+ +NPKD+ +P+  V+  MT  GVD S E    +  M++        +G    +GV P
Sbjct:    2 RGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINSDKFAKAKELGATDCINPKDHKEPIHKVLIGMTGYGVDYSFEVIGRIETMVAALASCHYNYGVSVIVGVPP 107
The following BLAST results are available for this feature:
BLAST of DY305814 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 152
Match NameE-valueIdentityDescription
YJJN_ECOLI9.201e-1131.31Uncharacterized zinc-type alcohol dehydrogenase-li... [more]
ADH1_ANAPL9.201e-1133.02Alcohol dehydrogenase 1 (Fragment) OS=Anas platyrh... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM2BG12RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305814 ID=DY305814; Name=DY305814; organism=Citrus sinensis; type=EST; length=1261bp
GATTTTACAGGTGTTGAGAGTATCATCATTCATCATCAATATGTCTGGCA
CAGCTGGTCAAGTTATTCGCTGCAAAGCGGCGGTGGCATGGGAGGCGGGG
AAGCCACTAGTGATTGAAGAAGTGGAGGTGGCTCCACCACAGAAAAATGA
AGTTCGATTGAAGATCCTCTTCACCTCTTTATGCCATACTGATGTTTACT
TCTGGGAAGCCAAGGGACAAACACCTCTCTTTCCTCGCATTTTTGGTCAT
GAAGCTGGAGGGATTGTAGAAAGTGTAGGGGAGGGGGTAACTGATCTCCA
ACCAGGAGACCATGTTCTTCCTGTATTCACAGGAGAGTGCAAGGAATGTC
CTCACTGTCATTCAGAGGAAAGCAATATGTGTGACCTCCTCCGGATCAAT
ACTGACAGGGGTGTTATGATTAATGATGGTCAGTCAAGGTTCTCGATTAA
GGGGAAGCCAATTTACCATTTTGTGGGCACTTCTACCTTCAGTGAATACA
CTGTTACCCACGTCGGTTGTGTTGCTAAGATCAATCCTGCTGCCCCTCTT
GACAAAGTTTGTGTACTCAGCTGCGGAATCTCCACAGGTTTTGGGGCTAC
TGTTAATGTTGCCAAACCGAAGAAGGGCCAGACTGTTGCCATTTTTGGAT
TGGGTGCAGTTGGCCTTGCTGCTGCCGAAGGGGCAAGAGTATCANGGGCT
TCCAGGATCATTGGTGTTGATTTGAACCCAAGCAGATTCAATGAAGCCAA
GAAGTTTGGGGTTACCGAGTTTGTGAATCCAAAAGATTATGACAAACCTG
TTCAACANGTGATTGCTGAAATGACCAATGGTGGAGTGGATAGAAGTGTT
GAATGTACTTGGAGCGTCCCAGGCATGATCTCAACCTTTGAATGCGTTCC
CCAAGGGTGGGGGTGTTGCCGTGCCTTGGGGGTGGGGCCAAACAAAAATG
ATGCATTTCAAAACTCCTCCCATGAATCCCCCTTTAAGGAAAGGACTTTT
TAAGGGGACCCTTCTTTTGGCCACCACACAACCTTCCCCCCTGAATCTTC
CCTTCCCATTGGTTGAAAAAAAACCAAGAAAAAAAGGAAAAAGGGAACCT
TGGAAAAAAATTCTCCCCCCCTCCGGCCCGGGGCCCCCCTTTCCCGCAAA
AAAAAAACAAAAAGGGCAATTTTTAAACCCCTCTCTTGCCCTTTTCTTCG
GGAGAAAAAAAAAAACCCATAATAAAGGGGGGCCCTCTTCTCTTTCCCTC
TCCCCTCCCCG
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