DY305808
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305808 vs. ExPASy Swiss-Prot
Match: SODM_BACSU (Superoxide dismutase [Mn] OS=Bacillus subtilis GN=sodA PE=1 SV=5) HSP 1 Score: 127.872 bits (320), Expect = 1.278e-28 Identity = 77/196 (39.29%), Postives = 104/196 (53.06%), Query Frame = 3 Query: 135 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQG-------AIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPCLVPLRGINVWELVTTYVTEWGPRLSEH---RWKVKNW 692 LP+LPY Y ALEP I E M +HH KHH YVTN NKAVE NK V L A++ NGGGH NH +FW L+P GGGEP +L I++ FGS + ++ +A A GSGW WL ++ +L + +T NQD +++ P+ G++VWE Y + R ++ W V NW Sbjct: 5 LPELPYAYDALEPHIDKETMTIHHTKHHNTYVTNLNKAVEGNTALANKSVEELVADLDSVPENIRTAVRNNGGGHANHKLFWTLLSP--NGGGEPT-GALAEEINSVFGSFDKFKEQFAAAAAGRFGSGWAWLVVNN--GKLEITSTPNQDSPLSEGK--TPILGLDVWE--HAYYLNYQNRRPDYISAFWNVVNW 191
BLAST of DY305808 vs. ExPASy Swiss-Prot
Match: SODM_LISIV (Superoxide dismutase [Mn] OS=Listeria ivanovii GN=sodA PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 1.669e-28 Identity = 73/199 (36.68%), Postives = 110/199 (55.28%), Query Frame = 3 Query: 126 TVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVV-------QLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPCLVPLRGINVWELVTTYVTEWGPRLSEH---RWKVKNW 692 T LP LPY Y ALEP E M++H+ KHH YVT N+AV + +K V +++GA++ +GGGH NH++FW +L+P GG P +L AI++ FG+ + +K +A AA GSGW WL ++ +L + +TANQD +++ P+ G++VWE Y ++ R E+ W V NW Sbjct: 2 TYELPKLPYTYDALEPNFDKETMEIHYTKHHNIYVTKLNEAVSGHAELASKPGEELVANLDSVPEEIRGAVRNHGGGHANHTLFWSSLSP---NGGGAPTGNLKAAIESEFGTFDEFKEKFNAAAAARFGSGWAWLVVNN--GKLEIVSTANQDSPLSEGK--TPVLGLDVWE--HAYYLKFQNRRPEYIDTFWNVINW 191
BLAST of DY305808 vs. ExPASy Swiss-Prot
Match: SODF_MYCTU (Superoxide dismutase [Fe] OS=Mycobacterium tuberculosis GN=sodB PE=1 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 2.847e-28 Identity = 71/165 (43.03%), Postives = 95/165 (57.58%), Query Frame = 3 Query: 132 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPC-LVPLRGINVWE 623 TLPDL +DY ALEP ISG+I +LHH KHH YV N AV +L +A K D S ++ + + FN GHVNH+I+WKNL+P GG+ P L AI FGS + + A +QGSGW LG DT +L++ + T P +VPL +++WE Sbjct: 5 TLPDLDWDYGALEPHISGQINELHHSKHHATYVKGANDAVAKLEEARAKEDHSAILLNEKNLAFNLAGHVNHTIWWKNLSP---NGGDKPTGELAAAIADAFGSFDKFRAQFHAAATTVQGSGWAALGWDTLGNKLLIFQVYDHQ---TNFPLGIVPLLLLDMWE 163
BLAST of DY305808 vs. ExPASy Swiss-Prot
Match: SODF_MYCBO (Superoxide dismutase [Fe] OS=Mycobacterium bovis GN=sodB PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 2.847e-28 Identity = 71/165 (43.03%), Postives = 95/165 (57.58%), Query Frame = 3 Query: 132 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPC-LVPLRGINVWE 623 TLPDL +DY ALEP ISG+I +LHH KHH YV N AV +L +A K D S ++ + + FN GHVNH+I+WKNL+P GG+ P L AI FGS + + A +QGSGW LG DT +L++ + T P +VPL +++WE Sbjct: 5 TLPDLDWDYGALEPHISGQINELHHSKHHATYVKGANDAVAKLEEARAKEDHSAILLNEKNLAFNLAGHVNHTIWWKNLSP---NGGDKPTGELAAAIADAFGSFDKFRAQFHAAATTVQGSGWAALGWDTLGNKLLIFQVYDHQ---TNFPLGIVPLLLLDMWE 163
BLAST of DY305808 vs. ExPASy Swiss-Prot
Match: SODM_CHLRE (Superoxide dismutase [Mn], mitochondrial OS=Chlamydomonas reinhardtii GN=SODA PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 3.718e-28 Identity = 77/207 (37.20%), Postives = 108/207 (52.17%), Query Frame = 3 Query: 135 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQL--FQALNKVDTSTVV-------QLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQD-PLVTKAPCL---VPLRGINVWELVTTYVTEWGPRLSEH---RWKVKNWRLAIE 707 LP LPYDY +LEP + M +HH KHHQ YV N N A+++ + L VD + V + I+ NGGGH NHS FWK + G P+ + AI+ FGS++ + K +A A GSGW WL + + L +++T NQD PL+T P + +PL G++VWE Y ++ R E+ W V NW E Sbjct: 5 LPPLPYDYGSLEPHVDATTMNIHHTKHHQTYVNNLNAALDKFPELKDLGLVDLNKAVGTDKLPKDVATVIRNNGGGHYNHSFFWKVMTNPSNTNG--PNGDVKAAIEASFGSVDEMKAKFNAAAAGRFGSGWAWLSVKPD-GSLSIDSTPNQDNPLMTALPDVAGGIPLLGLDVWE--HAYYLKYQNRRPEYIAAWWNVVNWEQVAE 206
BLAST of DY305808 vs. ExPASy Swiss-Prot
Match: SODM_PALVU (Superoxide dismutase [Mn], mitochondrial (Fragment) OS=Palinurus vulgaris PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 4.856e-28 Identity = 69/147 (46.94%), Postives = 86/147 (58.50%), Query Frame = 3 Query: 177 ISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPCLVPLRGINV 617 IS IMQ+HH KHHQAY+ N E+L QA D + + L AIKFNGGGH+NH+IFW N+AP GGEP + AI FGS +A K S ++GSGW WLG + +L V T NQDPL L+PL G++V Sbjct: 2 ISEMIMQIHHTKHHQAYINNLKACTEKLKQAEQANDVAAMNALLPAIKFNGGGHINHTIFWTNMAP--SAGGEPA-GPVADAITKEFGSFQAFKDKFSTASVGVKGSGWGWLGYCPKNDKLAVATCQNQDPL-QLTHGLIPLLGLDV 144
BLAST of DY305808 vs. ExPASy Swiss-Prot
Match: SODM_DEIRA (Superoxide dismutase [Mn] OS=Deinococcus radiodurans GN=sodA PE=1 SV=3) HSP 1 Score: 125.946 bits (315), Expect = 4.856e-28 Identity = 82/205 (40.00%), Postives = 108/205 (52.68%), Query Frame = 3 Query: 132 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKA----------VEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVH-EGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQD-PLVTKAPCLV---PLRGINVWELVTTYVTEWGPRLSEHR---WKVKNW 692 TLP LPY Y ALEP I M++HH KHHQ YV N NKA VEQL Q L++V +GA++ N GGH NHS+FW+ + + G P L AI++ FGS +A QK GSGW WL + + +L V +TANQD PL+ +A V P+ G++VWE Y + R ++ W V NW Sbjct: 4 TLPQLPYAYDALEPHIDARTMEIHHTKHHQTYVDNANKALEGTEFADLPVEQLIQQLDRVPADK----KGALRNNAGGHANHSMFWQIMGQGQGQNGANQPSGELLDAINSAFGSFDAFKQKFEDAAKTRFGSGWAWLVV--KDGKLDVVSTANQDNPLMGEAIAGVSGTPILGVDVWE--HAYYLNYQNRRPDYLAAFWNVVNW 200
BLAST of DY305808 vs. ExPASy Swiss-Prot
Match: SODM1_BACAN (Superoxide dismutase [Mn] 1 OS=Bacillus anthracis GN=sodA1 PE=1 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 4.856e-28 Identity = 77/203 (37.93%), Postives = 108/203 (53.20%), Query Frame = 3 Query: 135 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYN-----------KAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPCLVPLRGINVWELVTTYVTEWGPRLSEH---RWKVKNWRLA 701 LP+LPY Y ALEP E M +HH KHH Y+TN N K+VE+L LN+V + ++ A++ NGGGH NH+ FW L+P GGG+P L AI+ FGS +A ++ + GA GSGW WL ++ L V +T NQD +T+ P+ G++VWE Y + R ++ W V +W A Sbjct: 6 LPNLPYAYDALEPHFDKETMNIHHTKHHNTYITNLNAALEGHAELADKSVEELVANLNEVPEA----IRTAVRNNGGGHANHTFFWTILSP--NGGGQPV-GELATAIEAKFGSFDAFKEEFAKAGATRFGSGWAWLVVNN--GELEVTSTPNQDSPLTEGK--TPVIGLDVWE--HAYYLNYQNRRPDYIGAFWNVVDWNAA 195
BLAST of DY305808 vs. ExPASy Swiss-Prot
Match: SODM_PSEPU (Superoxide dismutase [Mn] OS=Pseudomonas putida GN=sodA PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 1.413e-27 Identity = 74/175 (42.29%), Postives = 99/175 (56.57%), Query Frame = 3 Query: 132 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKA----------VEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQD-PLVTKAPCLVPLRGINVWE 623 TLP LPY Y ALEP I + M++HH KHHQ YV N A VE+L A+ ++ S L+GA+ +GGGH NHS+FW ++P +GGGE PH L AI + G +A + + GSGW WL + T K LVVE++ NQD PL+ P+ G++VWE Sbjct: 4 TLPALPYAYDALEPHIDAQTMEIHHTKHHQTYVNGLNAAIEGTEWAEWPVEKLVGAVKQLPES----LRGAVTNHGGGHANHSLFWTVMSP--QGGGE-PHGQLAQAIASQLGGFDAFKEAFTKAALTRFGSGWAWLSV-TPQKTLVVESSGNQDSPLMFGN---TPIFGLDVWE 167
BLAST of DY305808 vs. ExPASy Swiss-Prot
Match: SODM_LISIN (Superoxide dismutase [Mn] OS=Listeria innocua GN=sodA PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 1.845e-27 Identity = 75/199 (37.69%), Postives = 107/199 (53.77%), Query Frame = 3 Query: 126 TVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAV-------EQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPCLVPLRGINVWELVTTYVTEWGPRLSEH---RWKVKNW 692 T LP LPY Y ALEP E M+LH+ KHH YVT N+AV E+ + L S ++GA++ +GGGH NH++FW L+P GG P L AI++ FG+ + +K +A AA GSGW WL ++ +L + +TANQD ++ P+ G++VWE Y ++ R E+ W V NW Sbjct: 2 TYELPKLPYTYDALEPNFDKETMELHYTKHHNTYVTKLNEAVSGHPELAEKPVEELVANLDSVPEDIRGAVRNHGGGHANHTLFWSILSP---NGGGAPTGDLKSAIESEFGTFDDFKEKFNAAAAARFGSGWAWLVVNN--GKLEIVSTANQDSPLSDGK--TPVLGLDVWE--HAYYLKFQNRRPEYIDTFWNVVNW 191 The following BLAST results are available for this feature:
BLAST of DY305808 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 221
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305808 ID=DY305808; Name=DY305808; organism=Citrus sinensis; type=EST; length=1263bpback to top |