DY305804

Overview
NameDY305804
Unique NameDY305804
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1192
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305804 vs. ExPASy Swiss-Prot
Match: UCP2_HUMAN (Mitochondrial uncoupling protein 2 OS=Homo sapiens GN=UCP2 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 3.830e-11
Identity = 55/175 (31.43%), Postives = 84/175 (48.00%), Query Frame = 3
Query:  291 KDLFSGTVGGAAQLICGHPFDTIKVKLQ----SQPAPLPGQPPKYAGAMDAVKQTIAAEGPRGLYKGMGAPLATVAAFNALLFTVRGQMEALLRSQPGAPLTVNQQIICGAGAGVAVSFLACPTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVAKRVLRSEGGLRGLFKGLVP 803
            K L +GT    A LI   P DT KV+LQ    SQ         +Y G M  +   +  EGPR LY G+ A L    +F ++   +   ++    ++     ++  +++ G+  G     +A PT+++K R QAQ A AG G+     +Y   V+  K + R E G RGL+KG  P
Sbjct:   16 KFLGAGTAACIADLIT-FPLDTAKVRLQIQGESQGPVRATASAQYRGVMGTILTMVRTEGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFY-TKGSEHASIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQ-ARAGGGR-----RYQSTVNAYKTIAREE-GFRGLWKGTSP 181          
BLAST of DY305804 vs. ExPASy Swiss-Prot
Match: UCP2_CANFA (Mitochondrial uncoupling protein 2 OS=Canis familiaris GN=UCP2 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 3.830e-11
Identity = 56/175 (32.00%), Postives = 85/175 (48.57%), Query Frame = 3
Query:  291 KDLFSGTVGGAAQLICGHPFDTIKVKLQSQ---PAPL-PGQPPKYAGAMDAVKQTIAAEGPRGLYKGMGAPLATVAAFNALLFTVRGQMEALLRSQPGAPLTVNQQIICGAGAGVAVSFLACPTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVAKRVLRSEGGLRGLFKGLVP 803
            K L +GT    A LI   P DT KV+LQ Q     P+      +Y G +  +   +  EGPR LY G+ A L    +F ++   +   ++    ++      +  +++ G+  G     +A PT+++K R QAQ A AGSG+     +Y   VD  K + R E G RGL+KG  P
Sbjct:   16 KFLGAGTAACIADLIT-FPLDTAKVRLQIQGERQGPVRAAASAQYRGVLCTILTMVRTEGPRSLYSGLVAGLQRQMSFASVRIGLYDSVKQFY-TKGSEHAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQ-ARAGSGR-----RYQSTVDAYKTIAREE-GFRGLWKGTSP 181          
BLAST of DY305804 vs. ExPASy Swiss-Prot
Match: UCP1_BOVIN (Mitochondrial brown fat uncoupling protein 1 (Fragment) OS=Bos taurus GN=UCP1 PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 3.830e-11
Identity = 56/190 (29.47%), Postives = 83/190 (43.68%), Query Frame = 3
Query:  297 LFSGTVGGAAQLICGHPFDTIKVKLQSQPAPLPGQPPKYAGAMDAVKQTIAAEGPRGLYKGMGAPLATVAAFNALLFTVRGQMEALLRSQPGAPLTVNQQIICGAGAGVAVSFLACPTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVAKRVLRSEGGLRGLFKGLVPQWHVRFKGCCHGLVCMEWVKK 866
            +FS  V      I   P DT KV+LQ Q   L     +Y G +  +      EGP  LY G+ A L    +  +L   +   ++    +  G   ++  +I  G   G    F+  PTE++K RLQAQS L G        +Y G  + A R++ +  GL GL+KG  P         C  LV  + +K+
Sbjct:    1 IFSAGVAACVADIITFPLDTAKVRLQIQGECLISSAIRYKGVLGTIITLAKTEGPVKLYSGLPAGLQRQISLASLRIGLYDTVQEFFTT--GKEASLGSKISAGLMTGGVAVFIGQPTEVVKVRLQAQSHLHGP-----KPRYTGTYN-AYRIIATTEGLTGLWKGTSPNLTTNVIINCTELVTYDLMKE 182          
BLAST of DY305804 vs. ExPASy Swiss-Prot
Match: TPC_MOUSE (Mitochondrial thiamine pyrophosphate carrier OS=Mus musculus GN=Slc25a19 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 3.830e-11
Identity = 51/169 (30.18%), Postives = 76/169 (44.97%), Query Frame = 3
Query:  306 GTVGGAAQLICGHPFDTIKVKLQSQPAPLPGQPPKYAGAMDAVKQTIAAEGPRGLYKGMGAPLATVAAFNALLFTVRGQMEALLR--SQPGAPLTVN-QQIICGAGAGVAVSFLACPTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVAKRVLRSEGGLRGLFKGLVP 803
            G   G A L   HP D ++ +L +Q     G+P  Y    +A++     EGP   YKG+   +  +  +  L F+    ++        P    T N + ++CG G+GV       P +LIK RLQ           G    Y G +D+ ++VL+ E G RG FKGL P
Sbjct:  126 GLSAGTATLTV-HPVDVLRTRLAAQ-----GEPKIYNNLREAIRTMYKTEGPFVFYKGLTPTVIAIFPYAGLQFSCYRSLKRAYDWLIPPDGKQTGNLKNLLCGCGSGVISKTFTYPLDLIKKRLQVGGFEHARSAFGQVRSYRGLLDLTQQVLQEE-GTRGFFKGLSP 287          
BLAST of DY305804 vs. ExPASy Swiss-Prot
Match: UCP2_PONAB (Mitochondrial uncoupling protein 2 OS=Pongo abelii GN=UCP2 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 5.002e-11
Identity = 55/175 (31.43%), Postives = 84/175 (48.00%), Query Frame = 3
Query:  291 KDLFSGTVGGAAQLICGHPFDTIKVKLQ----SQPAPLPGQPPKYAGAMDAVKQTIAAEGPRGLYKGMGAPLATVAAFNALLFTVRGQMEALLRSQPGAPLTVNQQIICGAGAGVAVSFLACPTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVAKRVLRSEGGLRGLFKGLVP 803
            K L +GT    A LI   P DT KV+LQ    SQ         +Y G M  +   +  EGPR LY G+ A L    +F ++   +   ++    ++     ++  +++ G+  G     +A PT+++K R QAQ A AG G+     +Y   V+  K + R E G RGL+KG  P
Sbjct:   16 KFLGAGTAACIADLIT-FPLDTAKVRLQIQGESQGPVHATASAQYRGVMGTILTMVRTEGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFY-TKGSEHASIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQ-ARAGGGR-----RYQSTVNAYKTIAREE-GFRGLWKGTSP 181          
BLAST of DY305804 vs. ExPASy Swiss-Prot
Match: UCP2_MOUSE (Mitochondrial uncoupling protein 2 OS=Mus musculus GN=Ucp2 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 5.002e-11
Identity = 54/175 (30.86%), Postives = 84/175 (48.00%), Query Frame = 3
Query:  291 KDLFSGTVGGAAQLICGHPFDTIKVKLQ----SQPAPLPGQPPKYAGAMDAVKQTIAAEGPRGLYKGMGAPLATVAAFNALLFTVRGQMEALLRSQPGAPLTVNQQIICGAGAGVAVSFLACPTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVAKRVLRSEGGLRGLFKGLVP 803
            K L +GT    A LI   P DT KV+LQ    SQ         +Y G +  +   +  EGPR LY G+ A L    +F ++   +   ++    ++      +  +++ G+  G     +A PT+++K R QAQ A AG G+     +Y   V+  K + R E G+RGL+KG  P
Sbjct:   16 KFLGAGTAACIADLIT-FPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFY-TKGSEHAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQ-ARAGGGR-----RYQSTVEAYKTIAREE-GIRGLWKGTSP 181          
BLAST of DY305804 vs. ExPASy Swiss-Prot
Match: SFC1_YEAST (Succinate/fumarate mitochondrial transporter OS=Saccharomyces cerevisiae GN=SFC1 PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 5.002e-11
Identity = 48/171 (28.07%), Postives = 79/171 (46.20%), Query Frame = 3
Query:  288 AKDLFSGTVGGAAQLICGHPFDTIKVKLQSQPAPLPGQPPKYAGAMDAVKQTIAAEGPRGLYKGMGAPLATVAAFNALLFTVRGQMEALLRSQPGAPLTVNQQIICGAGAGVAVSFLAC-PTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVAKRVLRSEGGLRGLFKGL 797
            A +L +G   G  + +C HP DTIKV++Q        +  K  G +   +     EG   LYKG+GA +  +    A+ F+       LL ++    ++     + G GAG+  + L   P E++K RLQAQ         G   KY   +  A  +++ E G+  L++G+
Sbjct:   11 AINLMAGGTAGLFEALCCHPLDTIKVRMQIYRRVAGIEHVKPPGFIKTGRTIYQKEGFLALYKGLGAVVIGIIPKMAIRFSSYEFYRTLLVNKESGIVSTGNTFVAGVGAGITEAVLVVNPMEVVKIRLQAQHLTPSEPNAG--PKYNNAIHAAYTIVKEE-GVSALYRGV 178          
BLAST of DY305804 vs. ExPASy Swiss-Prot
Match: ODC1_YEAST (Mitochondrial 2-oxodicarboxylate carrier 1 OS=Saccharomyces cerevisiae GN=ODC1 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 5.002e-11
Identity = 49/176 (27.84%), Postives = 81/176 (46.02%), Query Frame = 3
Query:  303 SGTVGGAAQLICGHPFDTIKVKLQSQ------PAPLPGQPP--KYAGAMDAVKQTIAAEGPRGLYKGMGAPLATVAAFNALLFTVRGQMEALLRS---QPGAPLTVNQQIICGAGAGVAVSFLACPTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVAKRVLRSEGGLRGLFKGL 797
            +G + G ++L+  +P D +K ++Q Q      PA +  +     Y G MD + + +  EG   LYKG+ +P+   A   A+ F+     +   +     P   +T    I  GA AG   +F+  P EL+K RLQ            V  ++  P++V K  +  +GG+  LF GL
Sbjct:   17 AGAIAGVSELLVMYPLDVVKTRMQLQVTTKGHPAVVAAKAAVDHYTGVMDCLTKIVKKEGFSHLYKGITSPILMEAPKRAIKFSGNDTFQTFYKKIFPTPNGEMTQKIAIYSGASAGAVEAFVVAPFELVKIRLQ-----------DVNSQFKTPIEVVKNSV-VKGGVLSLFNGL 180          
BLAST of DY305804 vs. ExPASy Swiss-Prot
Match: AGC1_YEAST (Mitochondrial aspartate-glutamate transporter AGC1 OS=Saccharomyces cerevisiae GN=AGC1 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 5.002e-11
Identity = 50/164 (30.49%), Postives = 78/164 (47.56%), Query Frame = 3
Query:  306 GTVGGAAQLICGHPFDTIKVKLQSQPAPLPGQPPKYAGAMDAVKQTIAAEGPRGLYKGMGAPLATVAAFNALLFTVRGQMEALLRSQPGAPLTVNQQIICGAGAGVAVSFLACPTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVAKRVLRSEGGLRGLFKGL 797
            G++ G       +P D IK ++Q+Q +       +Y  ++D + + I+ EG +GLY G+G  L  VA   A+  TV   M   L  + G  L++  +II GA AG        P E++K RLQ QS   G     +         + K++     GLRGL+ G+
Sbjct:  537 GSIAGCIGATVVYPIDFIKTRMQAQRSLA-----QYKNSIDCLLKIISREGIKGLYSGLGPQLIGVAPEKAIKLTVNDFMRNRLTDKNG-KLSLFPEIISGASAGACQVIFTNPLEIVKIRLQVQSDYVGE---NIQQANETATQIVKKL-----GLRGLYNGV 686          
BLAST of DY305804 vs. ExPASy Swiss-Prot
Match: AGC1_ASHGO (Mitochondrial aspartate-glutamate transporter AGC1 OS=Ashbya gossypii GN=AGC1 PE=3 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 5.002e-11
Identity = 51/163 (31.29%), Postives = 77/163 (47.24%), Query Frame = 3
Query:  306 GTVGGAAQLICGHPFDTIKVKLQSQPAPLPGQPPKYAGAMDAVKQTIAAEGPRGLYKGMGAPLATVAAFNALLFTVRGQMEALLRSQPGAPLTVNQQIICGAGAGVAVSFLACPTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVAKRVLRSEGGLRGLFKG 794
            G+V G    +  +P D +K ++Q+Q         KY  ++D + + ++ EG RGLY G+G  L  VA   A+  TV   M A L  + G  L++  +II GA AG        P E++K RLQ +S          A      + V K +     GL GL++G
Sbjct:  530 GSVAGCIGAMVVYPIDMVKTRMQAQR-----DFSKYKNSIDCLLKILSKEGVRGLYSGLGPQLIGVAPEKAIKLTVNDHMRATLAGRDG-KLSLPCEIISGATAGACQVVFTNPLEIVKIRLQVKSDYVAD----AARNSVNAISVIKNL-----GLIGLYRG 677          
The following BLAST results are available for this feature:
BLAST of DY305804 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
UCP2_HUMAN3.830e-1131.43Mitochondrial uncoupling protein 2 OS=Homo sapiens... [more]
UCP2_CANFA3.830e-1132.00Mitochondrial uncoupling protein 2 OS=Canis famili... [more]
UCP1_BOVIN3.830e-1129.47Mitochondrial brown fat uncoupling protein 1 (Frag... [more]
TPC_MOUSE3.830e-1130.18Mitochondrial thiamine pyrophosphate carrier OS=Mu... [more]
UCP2_PONAB5.002e-1131.43Mitochondrial uncoupling protein 2 OS=Pongo abelii... [more]
UCP2_MOUSE5.002e-1130.86Mitochondrial uncoupling protein 2 OS=Mus musculus... [more]
SFC1_YEAST5.002e-1128.07Succinate/fumarate mitochondrial transporter OS=Sa... [more]
ODC1_YEAST5.002e-1127.84Mitochondrial 2-oxodicarboxylate carrier 1 OS=Sacc... [more]
AGC1_YEAST5.002e-1130.49Mitochondrial aspartate-glutamate transporter AGC1... [more]
AGC1_ASHGO5.002e-1131.29Mitochondrial aspartate-glutamate transporter AGC1... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM2BF08RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305804 ID=DY305804; Name=DY305804; organism=Citrus sinensis; type=EST; length=1192bp
GCCCATTACCTACCTCCTTCCTTTTTAGTACCTTTTTTTTCTATTGTCAT
TCCTTTTTTTCTCTCATTAAAAAAGTAAACCCGGAAGAAAAAATAAGAAA
AATTAAACCCAGTTCCTTTTTCCTGGCGTATTTTTAATTTGTATACCCTC
CTTTTAATCTAATACTTTGTGTTTTCTCAAATTGAATCATTTGAGGGAAA
CAACTTTTCTCCACTTAGATTCGGTTGCCGTTCTCGGGGCTCTGCTTACT
CCGGTGCCAGTGAGAATCGGCTCTGATGGGAGACATAGCCAAGGATCTAT
TTTCTGGGACTGTTGGAGGGGCAGCACAATTAATATGTGGGCACCCATTT
GATACCATCAAGGTCAAGCTTCAAAGCCAGCCTGCTCCACTCCCTGGCCA
ACCTCCCAAGTATGCTGGTGCCATGGATGCTGTCAAGCAAACCATAGCTG
CCGAAGGGCCAAGGGGCTTGTACAAAGGTATGGGAGCTCCACTAGCTACT
GTTGCCGCTTTTAATGCCCTCCTATTTACAGTGAGAGGACAAATGGAGGC
ACTGCTCAGATCTCAACCTGGTGCCCCACTAACCGTCAACCAGCAGATTA
TTTGCGGGGCTGGGGCTGGTGTTGCTGTTTCTTTTCTTGCTTGCCCCACA
GAATTGATCAAATGCAGGTTGCAAGCCCAAAGTGCATTAGCAGGTTCTGG
CCAAGTTGGTGTGGCAGTGAAGTATGGTGGACCAGTGGATGTGGCTAAGC
GTGTTCTTAGATCAGAAGGCGGTCTTAGGGGTCTCTTCAAGGGCCTGGTC
CCACAATGGCACGTGAGGTTCAAGGGATGCTGCCATGGTTTGGTGTGTAT
GGAATGGGTGAAAAAGTAAATGGCAGGAAGCCAAGACACCTCCCCATTGG
GAAAAAGGAACAGTGTTTTTGGGAGGTGGTTAATCTGGGAGCTTGTTTCC
GGGTTCCCTGGTTACCCCCCTGAAGTTTTTCAAGAGGGGTTTTTCGGGGT
GAATAAATTACAAAATCCCCCAATTCCTCTGGGTTCCTTTGAAGCCCTTT
CAAAAAAATCCCGAAAAACCAAAAGGGGTCGCAAGGGTTTGGTAAAAGGG
GTTTCCCCCCCCGGCCCCGGGGGCCCAAAAAAGGTTTTCCCGCGGCAAAA
GGCGCGCGAGGGTTTCTCCTTTGGGGCCGTAAAAAGAAAGGT
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