DY305782
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305782 vs. ExPASy Swiss-Prot
Match: TRPC_PROMM (Indole-3-glycerol phosphate synthase OS=Prochlorococcus marinus (strain MIT 9313) GN=trpC PE=3 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 5.895e-50 Identity = 108/241 (44.81%), Postives = 154/241 (63.90%), Query Frame = 2 Query: 29 QNALDNAPPARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGANAVLLIAAVLPDLDIRYMTNICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGL 751 ++ + + P RDFI AL A++ PA+IAEVKKASPS+G++R DFDPV IA +Y +GGA+CLS+LTD+ +F+G FE L VR V PLLCK+FI+ +Q+Y AR GA+A LLI A+L D D+ Y++ + LGL LVEVHD E++RV TFE D+ T+ L + + ++Q+ +++V ESGLF D+ VQ G +AVLVGE++++Q D G+ L Sbjct: 56 KSQIADLPIPRDFIAALRQASRA---PAVIAEVKKASPSQGVIRADFDPVLIANAYAEGGASCLSVLTDKSFFQGGFEVLVEVRQT-VGLPLLCKDFILTPYQLYQARAAGADAALLIVAILSDQDLTYLSKVANSLGLNVLVEVHDAEELERVLNLGGFPLIGINNRDLTTFETDLETTETLSQ-QFATRLQQQGVLLVSESGLFNRADLDRVQAVGAEAVLVGEALMRQSDVCAGLQQL 291
BLAST of DY305782 vs. ExPASy Swiss-Prot
Match: TRPC_PROM1 (Indole-3-glycerol phosphate synthase OS=Prochlorococcus marinus (strain NATL1A) GN=trpC PE=3 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 5.895e-50 Identity = 106/240 (44.17%), Postives = 156/240 (65.00%), Query Frame = 2 Query: 38 LDNAPPARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGANAVLLIAAVLPDLDIRYMTNICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 757 + + P ++FI AL +N + PALI+E+KKASPSRGI+REDFD I + Y++GGA C+S+LTD+K+F+G F+ L VR + P+LCK+FI+ +Q+Y AR GA+A LLIAA+L D D++Y++ + + LGLT LVEVHD E++RV +F+ D+ TKKL + + I++ +I +V ESGLF +D+ V+ G AVLVGES++ Q+D G+ L G Sbjct: 59 IKDLPKTKNFIDALRNSNSK---PALISEIKKASPSRGIIREDFDAKMIGKMYQEGGANCISVLTDKKFFQGGFDVLVEVRKE-IIIPILCKDFILYPYQLYQARAAGADAALLIAAILTDSDLKYLSKVAEHLGLTILVEVHDSEELERVLNINVFNLIGINNRNLKSFKTDLEVTKKLAKNYANQ-IKENSITLVSESGLFNREDLDLVKSYGADAVLVGESLMSQEDILGGVKKLVG 293
BLAST of DY305782 vs. ExPASy Swiss-Prot
Match: TRPC_PROMA (Indole-3-glycerol phosphate synthase OS=Prochlorococcus marinus GN=trpC PE=3 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 1.112e-48 Identity = 100/217 (46.08%), Postives = 144/217 (66.36%), Query Frame = 2 Query: 107 PALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGANAVLLIAAVLPDLDIRYMTNICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 757 PA+IAE+KKASPSRG++REDF P +IA +Y+KGGA CLS+LTD+ +F+G F+ L VR + PLLCK+FI+ +QIY AR GA+A+LLIAA+L D D+ Y+ I LGL+ LVEVHD E++RV TFE D++ T K+ E +++++++++V ESG+FT +D+ V G AVL+GES+++Q D + L G Sbjct: 79 PAVIAEIKKASPSRGLIREDFKPGDIAIAYQKGGATCLSVLTDKTFFQGGFDVLADVRKI-IDIPLLCKDFILHPYQIYQARASGADAILLIAAILSDQDLMYLNKIALSLGLSILVEVHDAAELNRVLRLGGFPLIGINNRDLKTFETDLTTTCKVAT-ECSNLLKEQDVLLVSESGIFTREDLQKVASFGASAVLIGESLMRQKDLTNALKELIG 293
BLAST of DY305782 vs. ExPASy Swiss-Prot
Match: TRPC_PROMP (Indole-3-glycerol phosphate synthase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=trpC PE=3 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 1.605e-47 Identity = 97/241 (40.25%), Postives = 152/241 (63.07%), Query Frame = 2 Query: 38 LDNAPPARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGANAVLLIAAVLPDLDIRYMTNICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFGT 760 LD P +DF +++ + + P +IAE+KKASPS+G++REDF P EIA YEK GA+C+S+LTD+++F+GS+E L+ VR+A PLLCK+FI+ A+QIY AR GA+A+LLIAA+L D D+ Y+ I L ++ LVEVHD +E++R+ TF+ D+ + +++ + +I + NI+ + ESG+ DD+ + G+K VL+GE +++ D LF + Sbjct: 59 LDKLSPPKDFFQSILHSKIK---PGVIAEIKKASPSKGVIREDFKPKEIASCYEKSGASCISVLTDKRFFQGSYEILQDVRTA-TNLPLLCKDFIISAYQIYKARVSGADAILLIAAILSDDDLFYLKKIADNLKMSVLVEVHDGQELERILSLKSFNLIGINNRNLKTFKTDLKTSIRIM-SKYSDIFSKHNIVPISESGINNSDDLKTLNSIGIKGVLIGERFMRESDIENSFKKLFNS 294
BLAST of DY305782 vs. ExPASy Swiss-Prot
Match: TRPC_PROM5 (Indole-3-glycerol phosphate synthase OS=Prochlorococcus marinus (strain MIT 9515) GN=trpC PE=3 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 1.605e-47 Identity = 99/239 (41.42%), Postives = 153/239 (64.02%), Query Frame = 2 Query: 38 LDNAPPARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGANAVLLIAAVLPDLDIRYMTNICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLF 754 LD PP +DF +++ + + P +IAE+KKASPS+G++REDF P EIA SYE+ GA+C+S+LTD+++F+GS+E L+ VR A PLLCK+FI+ A+QIY AR GA+A+LLIAA+L D D+ Y+ I LG++ LVEVHDE+E+ R+ TF+ D+ + +++ + +I + NII + ESG+ +++ + G+K VL+GE +++ D LF Sbjct: 59 LDKLPPTKDFGKSILQSKIK---PGVIAEIKKASPSKGVIREDFRPNEIAFSYERSGASCISVLTDKRFFQGSYEILQDVRGA-TNLPLLCKDFIISAYQIYKARVSGADAILLIAAILSDDDLFYLKKIADNLGMSVLVEVHDEQELKRILSFKLFDLIGINNRDLKTFKTDLKTSIEMM-SKYSDIFSKHNIIPISESGINNSEELKKLVSIGIKGVLIGERFMRECDIEHSFKKLF 292
BLAST of DY305782 vs. ExPASy Swiss-Prot
Match: TRPC_AZOSB (Indole-3-glycerol phosphate synthase OS=Azoarcus sp. (strain BH72) GN=trpC PE=3 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 1.775e-46 Identity = 110/236 (46.61%), Postives = 147/236 (62.29%), Query Frame = 2 Query: 50 PPARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGANAVLLIAAVLPDLDIRYMTNICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 757 P ARDF+GA+ G PA+IAE+KKASPS+G++REDF P +IA SYE GAACLS+LTD+ +F+G+ E L+A R+A P L K+F+VDA+Q+Y AR GA+A+LLIAA L +++ M I LG+ LVEVHD E+++ TFEV + T LL E R IVV ESG+ P D+A ++E GV A LVGE+ ++ DPG G+ LFG Sbjct: 36 PAARDFVGAIRG-RITAGRPAVIAEIKKASPSKGVIREDFRPADIAPSYEAAGAACLSVLTDKPFFQGAPEYLQAARAA-CALPALRKDFLVDAYQVYEARAMGADAILLIAACLSLAEMQDMEAIAHGLGMGVLVEVHDGAELEQA-LKLRTPLVGINNRNLRTFEVSLQTTLGLLPRLAAEADR----IVVTESGILAPADVALMRENGVNAFLVGEAFMRVPDPGAGLRALFG 264
BLAST of DY305782 vs. ExPASy Swiss-Prot
Match: TRPC_PROM9 (Indole-3-glycerol phosphate synthase OS=Prochlorococcus marinus (strain MIT 9312) GN=trpC PE=3 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 1.962e-45 Identity = 94/241 (39.00%), Postives = 154/241 (63.90%), Query Frame = 2 Query: 38 LDNAPPARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGANAVLLIAAVLPDLDIRYMTNICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFGT 760 ++N P +DF ++ + + P LIAE+KKASPS+G++R+DF+P +IA YE+ GA+C+S+LTD+++F+GS+E LE VR + PLLCK+FI+ A+QIY AR GA+A+LLIAA+L D D+ Y+ I L ++ LVEVH++ E++R+ TF+ D+ + +L+ +I ++NI+ + ESG+ D+ ++ G+K VL+GE+ +++ D K LF + Sbjct: 59 IENLPDPKDFYKNILESKIK---PGLIAEIKKASPSKGVIRKDFNPEDIAICYEELGASCISVLTDKRFFQGSYEILETVRKS-TNLPLLCKDFIISAYQIYKARVSGADAILLIAAILSDDDLIYLKKIADNLKMSVLVEVHNDNELERILKLKSFNLIGINNRDLKTFKTDLKTSIELMH-IYADIFLKQNILPISESGINCAQDLESLRSIGIKGVLIGETFMRESDIEKSFKKLFNS 294
BLAST of DY305782 vs. ExPASy Swiss-Prot
Match: TRPC_PROMS (Indole-3-glycerol phosphate synthase OS=Prochlorococcus marinus (strain AS9601) GN=trpC PE=3 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 9.739e-45 Identity = 94/241 (39.00%), Postives = 152/241 (63.07%), Query Frame = 2 Query: 38 LDNAPPARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGANAVLLIAAVLPDLDIRYMTNICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFGT 760 ++N P +DF ++ + + P +IAE+KKASPS+G++R+DF+P IA YE GA+C+S+LTD+K+F+GS+E LE VR + PLLCK+FI+ A+QIY AR GA+A+LLIAA+L D D+ Y+ I L ++ LVEVH+ E++R+ TF+ D+ +K+L+ +I ++NII + ESG+ +D+ ++ G+ VL+GE+ +++ D + LF + Sbjct: 59 IENLPTPKDFYKNILESKIK---PGVIAEIKKASPSKGVIRKDFNPENIAICYEGLGASCISVLTDKKFFQGSYEILETVRKS-TNLPLLCKDFIISAYQIYKARVSGADAILLIAAILSDDDLIYLKKIADNLKMSVLVEVHNSYELERILKLKSFNLIGINNRDLKTFKTDLKTSKELM-NTYADIFLKQNIIPISESGINCAEDLESLRSIGIMGVLIGETFMRETDIEQSFKKLFNS 294
BLAST of DY305782 vs. ExPASy Swiss-Prot
Match: TRPC_POLNA (Indole-3-glycerol phosphate synthase OS=Polaromonas naphthalenivorans (strain CJ2) GN=trpC PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 1.272e-44 Identity = 100/233 (42.92%), Postives = 150/233 (64.38%), Query Frame = 2 Query: 59 RDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGANAVLLIAAVLPDLDIRYMTNICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 757 RDF+GAL A G PA+IAE+KKASPS+G+LR DF P +IA+SY + GAACLS+LTD+++F+GS + L+ R A P+L K+FI+DA+Q+Y +R GA+ +LLIAA L D ++ + + L + LVEVHDE E++R TFEV + T +L+ G++ ++ ++V ESG+ TP+D+ +++A V A LVGE+ ++ D+PG + LFG Sbjct: 39 RDFVGALRA-KIAAGKPAVIAEIKKASPSKGVLRADFIPADIAQSYAEFGAACLSVLTDQQFFQGSIDYLKQAR-ASCSLPVLRKDFIIDAYQVYESRVMGADCILLIAACLDDAQMKTLEALAMSLDMAVLVEVHDEAELERA-LKLRTPLIGINNRNLNTFEVSLDTTLRLM----GKVPAER--LLVTESGITTPEDVKRMRDARVNAFLVGEAFMRADEPGVALAELFG 262
BLAST of DY305782 vs. ExPASy Swiss-Prot
Match: TRPC_PROM2 (Indole-3-glycerol phosphate synthase OS=Prochlorococcus marinus (strain MIT 9215) GN=trpC PE=3 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 2.170e-44 Identity = 92/239 (38.49%), Postives = 152/239 (63.60%), Query Frame = 2 Query: 38 LDNAPPARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGANAVLLIAAVLPDLDIRYMTNICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLF 754 ++N P +DF ++ + + P +IAE+KKASPS+G++R+DF+P +IA YE GA+C+S+LTD+++F+GS+E LE VR + PLLCK+FI+ A+QIY AR GA+A+LLIAA+L D D+ Y+ I L ++ LVEVH++ E++R+ TF+ D+ + +L+ +I ++NI+ + ESG+ D+ ++ G+K VL+GE+ +++ D + LF Sbjct: 59 IENLPAPKDFYKNILESKIK---PGVIAEIKKASPSKGVIRKDFNPKDIAICYEGLGASCISVLTDKRFFQGSYEILETVRKS-TNLPLLCKDFIISAYQIYKARVSGADAILLIAAILSDDDLIYLKKIADNLKMSVLVEVHNDNELERILKLKSFNLIGINNRDLKTFKTDLKTSIELM-NVYADIFSKQNILPISESGINCAKDLESLRSIGIKGVLIGETFMRESDIEESFNKLF 292 The following BLAST results are available for this feature:
BLAST of DY305782 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 399
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY305782 ID=DY305782; Name=DY305782; organism=Citrus sinensis; type=EST; length=1262bpback to top |