DY305782
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305782 vs. ExPASy Swiss-Prot
Match: TRPC_NEIMB (Indole-3-glycerol phosphate synthase OS=Neisseria meningitidis serogroup B GN=trpC PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 7.717e-42 Identity = 101/236 (42.80%), Postives = 138/236 (58.47%), Query Frame = 2 Query: 47 APPARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGANAVLLIAAVLPDLDIRYMTNICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLF 754 A P R FI ++ + R LPA+IAE+KKASPS+G++R DF P EIAR+YE GAACLS+LTDE YF+GS E L+ R A V P+L K+FI+D +Q+Y AR GA+AVLLIAA L + + LG+T L+E+HDE E+++ TFEV + T LL G+ VV ESG+ D+ ++Q GV L+GE+ ++ DD + LF Sbjct: 35 AAPVRSFIDSIRGKH-RLNLPAVIAEIKKASPSKGLIRPDFRPAEIARAYENAGAACLSVLTDEPYFQGSPEYLKQAREA-VSLPVLRKDFIIDEYQVYQARAWGADAVLLIAAALEQEQLERFEAVAHELGMTVLLELHDETELEK-CRNLTTPLWGVNNRNLRTFEVSLDQTLSLLPALEGK-------TVVTESGITGKADVEFMQSRGVHTFLIGETFMRADDIEAEVGKLF 260
BLAST of DY305782 vs. ExPASy Swiss-Prot
Match: TRPC_NEIG2 (Indole-3-glycerol phosphate synthase OS=Neisseria gonorrhoeae (strain NCCP11945) GN=trpC PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 1.008e-41 Identity = 101/236 (42.80%), Postives = 139/236 (58.90%), Query Frame = 2 Query: 47 APPARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGANAVLLIAAVLPDLDIRYMTNICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLF 754 A P R FI ++ + R LPA+IAE+KKASPS+G++R DF P EIAR+YE GAACLS+LTDE YF+GS E L+ R A V P+L K+FI+D +Q+Y AR GA+AVLLIAA L + + LG+T L+E+HDE E+++ TFEV + T LL G+ VV ESG+ D+ +++ GV L+GE+ ++ DD G + LF Sbjct: 35 AAPVRSFIDSIRGKH-RLNLPAVIAEIKKASPSKGLIRPDFRPAEIARAYENAGAACLSVLTDEPYFQGSPEYLKQAREA-VLLPVLRKDFIIDEYQVYQARAWGADAVLLIAAALEQGQLERFEALAHELGMTVLLELHDETELEK-CRNLTTPLRGVNNRNLRTFEVSLDQTLSLLPALEGK-------TVVTESGITGKADVEFMRARGVHTFLIGETFMRADDIGAEVGKLF 260
BLAST of DY305782 vs. ExPASy Swiss-Prot
Match: TRPC_NEIG1 (Indole-3-glycerol phosphate synthase OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=trpC PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 1.008e-41 Identity = 101/236 (42.80%), Postives = 139/236 (58.90%), Query Frame = 2 Query: 47 APPARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGANAVLLIAAVLPDLDIRYMTNICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLF 754 A P R FI ++ + R LPA+IAE+KKASPS+G++R DF P EIAR+YE GAACLS+LTDE YF+GS E L+ R A V P+L K+FI+D +Q+Y AR GA+AVLLIAA L + + LG+T L+E+HDE E+++ TFEV + T LL G+ VV ESG+ D+ +++ GV L+GE+ ++ DD G + LF Sbjct: 35 AAPVRSFIDSIRGKH-RLNLPAVIAEIKKASPSKGLIRPDFRPAEIARAYENAGAACLSVLTDEPYFQGSPEYLKQAREA-VLLPVLRKDFIIDEYQVYQARAWGADAVLLIAAALEQGQLERFEALAHELGMTVLLELHDETELEK-CRNLTTPLWGVNNRNLRTFEVSLDQTLSLLPALEGK-------TVVTESGITGKADVEFMRARGVHTFLIGETFMRADDIGAEVGKLF 260
BLAST of DY305782 vs. ExPASy Swiss-Prot
Match: TRPC_BURVG (Indole-3-glycerol phosphate synthase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=trpC PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 1.316e-41 Identity = 105/237 (44.30%), Postives = 142/237 (59.92%), Query Frame = 2 Query: 44 NAPPARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGANAVLLIAAVLPDLDIRYMTNICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLF 754 +A RDF+GAL A Q G PA+IAEVKKASPS+G+LRE F P +IARSY GAACLS+LTDE++F+GS LE R+A P+L K+FIVDA+QI AR GA+A+LLIAA L ++ + LGL LVEVHD EM++ TFE I T +L+ + + +VV ESG+ + D+ ++ A V A LVGE+ ++ D+PG + +F Sbjct: 33 SARDLRDFVGALRA-KQAAGQPAVIAEVKKASPSKGVLREHFVPADIARSYATHGAACLSVLTDEQFFQGSVRYLEEARAA-CTLPVLRKDFIVDAYQILEARAMGADAILLIAAALDTPLMQELEAYAHSLGLAVLVEVHDRNEMEQA-LTLKTPLVGINNRNLRTFETTIQTTLDMLD------MVPADRMVVTESGILSRADVDTMRAANVNAFLVGEAFMRADEPGAALARMF 260
BLAST of DY305782 vs. ExPASy Swiss-Prot
Match: TRPC_LARHH (Indole-3-glycerol phosphate synthase OS=Laribacter hongkongensis (strain HLHK9) GN=trpC PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 3.830e-41 Identity = 98/242 (40.50%), Postives = 139/242 (57.44%), Query Frame = 2 Query: 29 QNALDNAPPARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGANAVLLIAAVLPDLDIRYMTNICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLF 754 +N + RDF GAL Q G +IAE+KKASPS+GI+R DF P IA SY GAACLS+LTD +YF+G+ + L A R A P+L K+F+VD +Q++ AR GA+ +LLI A L + + I + LG+ LVE HD E+DR TF+V + T LL +I+ + + + ESG+ TPDD+ ++EAGV + LVGE+ +++ DPG + LF Sbjct: 29 RNDAETRRDIRDFAGALTRC-QSAGRAGVIAEIKKASPSKGIIRPDFQPAAIAESYAGHGAACLSVLTDVRYFQGAADYLVAARDA-CDLPVLRKDFLVDEYQVFEARAMGADCILLIVAALDNARLADFEAIARELGMAVLVETHDAAELDRA-LRLASPLIGVNNRNLRTFDVSLDTTLSLL-----PVIQAEGRMAITESGISTPDDVIRMREAGVNSFLVGEAFMREADPGAALAHLF 262
BLAST of DY305782 vs. ExPASy Swiss-Prot
Match: TRPC_RHOFD (Indole-3-glycerol phosphate synthase OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=trpC PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 1.455e-40 Identity = 100/234 (42.74%), Postives = 142/234 (60.68%), Query Frame = 2 Query: 59 RDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGANAVLLIAAVLPDLDIRYMTNICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFGT 760 RDF+ AL G PA+IAE+KK+SPS+G+LREDF P +IA+SY + GAACLS+LTD ++F+G + L+ R A P+L K+F++DA+QIY +R GA+AVLLIAA+L D ++ + I + L + LVEVHD E+ R TFEV + T L+ E+ + ++V ESG+ T DD+ + AGV A LVGE+ ++ DPG + LF T Sbjct: 39 RDFVAALRG-KIAAGQPAVIAEIKKSSPSKGVLREDFIPADIAQSYAEHGAACLSVLTDLQFFRGCIDYLKQAR-ASCPLPVLRKDFMLDAYQIYESRACGADAVLLIAAILDDAQMKDLEAIARSLDMAVLVEVHDAPELARA-LQLKTPLIGINNRNLKTFEVSLDTTLTLMR----ELPADR--LLVCESGIHTRDDVLRMGAAGVNAFLVGEAFMRAPDPGLALAELFAT 263
BLAST of DY305782 vs. ExPASy Swiss-Prot
Match: TRPC_BURCM (Indole-3-glycerol phosphate synthase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=trpC PE=3 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 1.901e-40 Identity = 105/237 (44.30%), Postives = 140/237 (59.07%), Query Frame = 2 Query: 44 NAPPARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGANAVLLIAAVLPDLDIRYMTNICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLF 754 +A RDF+GAL A Q G A+IAEVKKASPS+G+LRE F P +IARSY GAACLS+LTDE++F+GS LE R+A P+L K+FIVDA+QI AR GA+A+LLIAA L ++ + LGL LVEVHD EM++ TFE I T +L+ + IVV ESG+ + D+ ++ A V A LVGE+ ++ D PG+ + +F Sbjct: 33 SARDLRDFVGALRA-KQAAGHAAVIAEVKKASPSKGVLREHFVPADIARSYAAHGAACLSVLTDEQFFQGSVRYLEEARAA-CTLPVLRKDFIVDAYQILEARAMGADAILLIAAALDTPLMQDLEAYAHSLGLAVLVEVHDRDEMEQA-LTLKTPLLGINNRNLRTFETSIQTTLDMLD------MIPPERIVVTESGILSRTDVDTMRAANVNAFLVGEAFMRADQPGEELARMF 260
BLAST of DY305782 vs. ExPASy Swiss-Prot
Match: TRPC_RHOPS (Indole-3-glycerol phosphate synthase OS=Rhodopseudomonas palustris (strain BisB5) GN=trpC PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 2.482e-40 Identity = 98/242 (40.50%), Postives = 142/242 (58.68%), Query Frame = 2 Query: 2 KTEEAIIYAQNALDNAPPARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGANAVLLIAAVLPDLDIRYMTNICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDD 727 K E + Q A APP R F+ AL A G ALIAE+KKASPS+G++R DFDP +A++Y++GGAACLS+LTD F+G + L A R+A V P L K+F+ D +Q+ AR GA+ +L+I A L D + R + + LG+ L+EVH+ E+DR TFEV ++ ++ L + + ++VGESG+FTPDD+A + G+ LVGES+++Q D Sbjct: 20 KRERPLAALQAAARAAPPPRGFVSALRA-KLADGDYALIAEIKKASPSKGLIRPDFDPPALAKAYQQGGAACLSVLTDTPSFQGHLDYLVAARAA-VSLPALRKDFMYDTYQVVEARAHGADCILIIMAALDDSEARDIEDAALDLGMDVLLEVHNHAELDRA-LALRSPMIGVNNRNLRTFEVTLATSEALAP------LIPSDRLMVGESGIFTPDDLARLARVGMSTFLVGESLMRQQD 252
BLAST of DY305782 vs. ExPASy Swiss-Prot
Match: TRPC_BURA4 (Indole-3-glycerol phosphate synthase OS=Burkholderia ambifaria (strain MC40-6) GN=trpC PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 4.234e-40 Identity = 104/237 (43.88%), Postives = 140/237 (59.07%), Query Frame = 2 Query: 44 NAPPARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGANAVLLIAAVLPDLDIRYMTNICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLF 754 +A RDF+GAL A Q G A+IAEVKKASPS+G+LRE F P +IARSY GAACLS+LTDE++F+GS LE R+A P+L K+FIVDA+QI AR GA+A+LLIAA L ++ + LGL LVEVHD EM++ TFE I T +L+ + +VV ESG+ + D+ ++ A V A LVGE+ ++ D PG+ + +F Sbjct: 33 SARDLRDFVGALRA-KQAAGHAAVIAEVKKASPSKGVLREHFVPADIARSYAAHGAACLSVLTDEQFFQGSVRYLEEARAA-CTLPVLRKDFIVDAYQILEARAMGADAILLIAAALDTPLMQDLEAYAHSLGLAVLVEVHDRDEMEQA-LTLKTPLLGINNRNLRTFETSIQTTLDMLD------MIPPERMVVTESGILSRTDVDTMRAANVNAFLVGEAFMRADQPGEELARMF 260
BLAST of DY305782 vs. ExPASy Swiss-Prot
Match: TRPC_ACIAD (Indole-3-glycerol phosphate synthase OS=Acinetobacter sp. (strain ADP1) GN=trpC PE=3 SV=2) HSP 1 Score: 165.622 bits (418), Expect = 5.530e-40 Identity = 96/240 (40.00%), Postives = 138/240 (57.50%), Query Frame = 2 Query: 47 APPARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGANAVLLIAAVLPDLDIRYMTNICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNT---KKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 757 APP R F +L R+ P +IAE+KKASPS+G++R DF+P EIA+ YE+ GAACLS+LTD +F+G+ EN+ A+ P L K+F++D + + AR A+ +LLI A L D + M+ L LVEVHDE+E++R TF+VD++ + KKLL+ R ++V ESG+ TP D+ +QE + + LVGES +KQ P + T LFG Sbjct: 39 APPVRGFAQSL-----RSKRPGVIAEIKKASPSKGVIRADFNPAEIAQQYEQAGAACLSVLTDVDFFQGADENI-AIARQHCSLPALRKDFLIDPYNVVEARALQADCILLIVACLSDQQLEEMSKTAFEYDLDVLVEVHDEQELERALKLSEQCLLGVNNRNLKTFDVDLNTSLRLKKLLDPSR---------LLVTESGIATPQDVQLMQEHDIHSFLVGESFMKQPRPDQAFTELFG 263 The following BLAST results are available for this feature:
BLAST of DY305782 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 399
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305782 ID=DY305782; Name=DY305782; organism=Citrus sinensis; type=EST; length=1262bpback to top |