DY305782
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305782 vs. ExPASy Swiss-Prot
Match: TRPC_ACIF5 (Indole-3-glycerol phosphate synthase OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=trpC PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 1.232e-39 Identity = 103/251 (41.04%), Postives = 146/251 (58.17%), Query Frame = 2 Query: 2 KTEEAIIYAQNALDNAPPARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGANAVLLIAAVLPDLDIRYMTNICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLF 754 +T + Q A+ P R+F+GA+ A G PA+IAE+KKASPS G++REDF+PV IA+ Y GAACLS+LTDE YF+G+ L A R A P+L K+F +D +Q++ AR GA+A+LLI A L D +++ + + L L LVEVHD E+ R F +I T KLL EI R++ IVV ESG+ + +++A ++ AGV A LVGE+ ++ PG + LF Sbjct: 20 QTRLGLAELQAAVALTAPPRNFVGAVRA-RMAQGQPAVIAEIKKASPSAGVIREDFNPVTIAQDYAAHGAACLSVLTDEHYFQGADLYLAAAREA-CPLPVLRKDFCIDPYQVWEARAIGADAILLIVAALSDAELQSLEATAQSLDLAVLVEVHDAAELQRA-LKLRTPLIGINNRDLRRFVTEIETTLKLLP----EIPRER--IVVTESGIRSREEVATLRAAGVGAFLVGEAFMRTAQPGDALQHLF 261
BLAST of DY305782 vs. ExPASy Swiss-Prot
Match: TRPC_ACIF2 (Indole-3-glycerol phosphate synthase OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=trpC PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 1.232e-39 Identity = 103/251 (41.04%), Postives = 146/251 (58.17%), Query Frame = 2 Query: 2 KTEEAIIYAQNALDNAPPARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGANAVLLIAAVLPDLDIRYMTNICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLF 754 +T + Q A+ P R+F+GA+ A G PA+IAE+KKASPS G++REDF+PV IA+ Y GAACLS+LTDE YF+G+ L A R A P+L K+F +D +Q++ AR GA+A+LLI A L D +++ + + L L LVEVHD E+ R F +I T KLL EI R++ IVV ESG+ + +++A ++ AGV A LVGE+ ++ PG + LF Sbjct: 20 QTRLGLAELQAAVALTAPPRNFVGAVRA-RMAQGQPAVIAEIKKASPSAGVIREDFNPVTIAQDYAAHGAACLSVLTDEHYFQGADLYLAAAREA-CPLPVLRKDFCIDPYQVWEARAIGADAILLIVAALSDAELQSLEATAQSLDLAVLVEVHDAAELQRA-LKLRTPLIGINNRDLRRFVTEIETTLKLLP----EIPRER--IVVTESGIRSREEVATLRAAGVGAFLVGEAFMRTAQPGDALQHLF 261
BLAST of DY305782 vs. ExPASy Swiss-Prot
Match: TRPC_XYLFA (Indole-3-glycerol phosphate synthase OS=Xylella fastidiosa GN=trpC PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 2.102e-39 Identity = 97/235 (41.28%), Postives = 137/235 (58.30%), Query Frame = 2 Query: 50 PPARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGANAVLLIAAVLPDLDIRYMTNICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLF 754 P R F GAL A G PA+IAE+KKASPS+G+LREDF P EIA SYE GGA+CLS+LTD +FKG + L R A P+L K+F +D +Q+Y AR GA+ +LLI A L D + ++ + LG+ LVEVHD E++R TF V + T + +G + R + ++V ESG+ T D+ ++ AGV A LVGE+ ++ +PG+ + +F Sbjct: 36 PTPRGFAGALQATIAH-GDPAVIAEIKKASPSKGVLREDFRPAEIAISYELGGASCLSVLTDVHFFKGHDDYLSQARDA-CTLPVLRKDFTIDPYQVYEARVLGADCILLIVAALDDAQLVDLSGLALQLGMDVLVEVHDIDELERA-IQISAPLIGINNRNLSTFNVSLETTLTM----KGLVPRDR--LLVSESGILTSADVQRLRAAGVNAFLVGEAFMRATEPGESLREMF 261
BLAST of DY305782 vs. ExPASy Swiss-Prot
Match: TRPC_RHOBA (Indole-3-glycerol phosphate synthase OS=Rhodopirellula baltica GN=trpC PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 2.102e-39 Identity = 101/231 (43.72%), Postives = 139/231 (60.17%), Query Frame = 2 Query: 35 ALDNAPPARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGANAVLLIAAVLPDLDIRYMTNICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDD 727 A + P RDF G+L A +Q LIAEVK+ASPS G++REDFDP IA+SYE GGAAC+S+LTDE +F+GS + L VRSA V P+L K+FIVD +Q+ AR GA+AVLLIA L + M LGL L+E+++ + V TFE D+ + +L +I + +VVGESG+ T D+A ++ G+KA+LVGES+++Q D Sbjct: 30 AAKDLPVCRDFHGSLAATDQ----VRLIAEVKRASPSAGLIREDFDPPTIAKSYEDGGAACISVLTDEPFFQGSLDYLRQVRSA-VDLPILRKDFIVDPYQLLQARVAGADAVLLIAECLSPQQLIEMDEQASELGLQTLIELYEPENLAPV-LATKTRLVGINNRDLRTFETDLQHCVRL----AADIPSDR--LVVGESGIRTAADVAMLKAGGIKAILVGESLMRQPD 248
BLAST of DY305782 vs. ExPASy Swiss-Prot
Match: TRPC_XANP2 (Indole-3-glycerol phosphate synthase OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=trpC PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 3.585e-39 Identity = 92/227 (40.53%), Postives = 139/227 (61.23%), Query Frame = 2 Query: 47 APPARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGANAVLLIAAVLPDLDIRYMTNICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDD 727 AP R F GA+ A + G ALIAE+KKASPS+G++R DFDP +AR+Y++GGA CLS+LTD F+G+ E L + R+A V P+L K+F+ D +Q+ AR GA+ +L+I A + DL R + + G+ A+VEVHD+ E++R TFE + +++L K+ I +GESG+FTP D+A + + G+ +LVGES+++Q+D Sbjct: 35 APRVRPFAGAI-ATSLAEGRTALIAEIKKASPSKGLIRADFDPPALARAYQRGGATCLSVLTDTPSFQGAPEFLGSARAA-VDLPVLRKDFMYDTYQVAEARAWGADCILIIMAGVDDLLARDLADAAAAYGMDAIVEVHDDAELERA-LDLPCRLIGINNRNLRTFETSLETSERLAPRV------PKDRIAIGESGIFTPQDVARLAKVGIGTILVGESLMRQED 252
BLAST of DY305782 vs. ExPASy Swiss-Prot
Match: TRPC_VEREI (Indole-3-glycerol phosphate synthase OS=Verminephrobacter eiseniae (strain EF01-2) GN=trpC PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 3.585e-39 Identity = 97/236 (41.10%), Postives = 140/236 (59.32%), Query Frame = 2 Query: 59 RDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKG----GAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGANAVLLIAAVLPDLDIRYMTNICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLF 754 RDF GAL A + G A+IAE+KKASPS+G+LR DF +IA+SY +G AACLS+LTD+ +F+GS + L+ R A + P+L K+F++D +Q+Y AR GA+A+LLIAA L D + I + L + L+EVHD E++R +FEV +S T +L E + V ESG+ TP D+ +++AGV+A LVGE+ ++ DPG + LF Sbjct: 39 RDFEGALRAKISQ-GQAAVIAEIKKASPSKGLLRADFIAADIAQSYAEGDAGVSAACLSVLTDQAFFQGSIDYLKQAR-ASCQLPVLRKDFLLDPYQVYEARAMGADAILLIAACLDDAQLADFEAIARSLDMAVLLEVHDRPELERALARCKTPLVGINNRNLRSFEVSLSTTLDMLADMPPE------RLPVTESGILTPQDVKTLRDAGVQAFLVGEAFMRAADPGLALARLF 266
BLAST of DY305782 vs. ExPASy Swiss-Prot
Match: TRPC_ACIAC (Indole-3-glycerol phosphate synthase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=trpC PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 4.682e-39 Identity = 99/236 (41.95%), Postives = 139/236 (58.90%), Query Frame = 2 Query: 59 RDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGG----AACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGANAVLLIAAVLPDLDIRYMTNICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLF 754 RDF GAL A G A+IAE+KKASPS+G++RE+F P +IA+SY +G AACLS+LTD ++F+G + L+ R A P+L K+F+VDA+QIY +R GA+A+LLIAA L D + I LG+ ALVEVHD E+DR TFEV + T L + + ++V ESG+ TP D+ +++A V A LVGE+ ++ +PG + LF Sbjct: 39 RDFEGALRA-KIAAGQAAVIAEIKKASPSKGVIRENFIPADIAQSYAEGNGKVSAACLSVLTDRQFFQGQPDYLKQAR-ASCALPVLRKDFMVDAYQIYESRAMGADAILLIAACLEDAQMAEFEAIAHSLGMAALVEVHDGAELDRA-LKLRTPLVGINNRNLRTFEVSLDTTVSLRKAV------PSDRLLVAESGILTPQDVKTLRDADVHAFLVGEAFMRAQEPGAALAKLF 265
BLAST of DY305782 vs. ExPASy Swiss-Prot
Match: TRPC_VARPS (Indole-3-glycerol phosphate synthase OS=Variovorax paradoxus (strain S110) GN=trpC PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 6.115e-39 Identity = 102/236 (43.22%), Postives = 140/236 (59.32%), Query Frame = 2 Query: 59 RDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKG----GAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGANAVLLIAAVLPDLDIRYMTNICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLF 754 RDF GAL G A+IAEVKKASPS+G+LREDF P +IA+SY +G AACLS+LTD+++F+G + L+ R A P+L K+FIVDA+Q+Y +R GA+AVLLIAA L D ++ I + LG+ LVEVHD E++R FEV I T LL + + V ESG+ T +D+A ++ AGV A LVGE+ ++ +PG+ + LF Sbjct: 39 RDFEGALRT-RIAAGHAAVIAEVKKASPSKGVLREDFIPADIAQSYAEGDGEISAACLSVLTDKQFFQGGVDYLKQAR-ASCDLPVLRKDFIVDAYQVYESRAMGADAVLLIAACLDDAQMKDYEAIARGLGMAVLVEVHDAAELERA-LKLKTPLIGVNNRNLRNFEVSIQATIDLLPR------LPADRLAVTESGIATREDVATLRAAGVHAFLVGEAFMRAKEPGEALAALF 265
BLAST of DY305782 vs. ExPASy Swiss-Prot
Match: TRPC_PSEAE (Indole-3-glycerol phosphate synthase OS=Pseudomonas aeruginosa GN=trpC PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 1.043e-38 Identity = 99/237 (41.77%), Postives = 139/237 (58.65%), Query Frame = 2 Query: 44 NAPPARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGANAVLLIAAVLPDLDIRYMTNICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLF 754 +A R F AL+ +R PA+IAE+KKASPS+G+LRE F P EIARSYE GGAACLS+LTD +F+G+ L+ R+A P++ K+F++D +QI AR GA+ +LLI + L D+ + + K +GL LVEVHD E++R TFEV + T LL EI R + +VV ESG+ D+ ++ + V A LVGE+ ++ DDPG + LF Sbjct: 36 SADAPRGFANALLERAKRKE-PAVIAEIKKASPSKGVLREHFVPAEIARSYEAGGAACLSVLTDVDFFQGADAYLKEARAA-CALPVIRKDFMIDPYQIVEARAIGADCILLIVSALDDVLMAELAATAKSVGLDVLVEVHDGTELERALKTLDTPLVGINNRNLHTFEVSLETTLDLLP----EIPRDR--LVVTESGILNRADVELMEVSEVYAFLVGEAFMRADDPGLELKRLF 264
BLAST of DY305782 vs. ExPASy Swiss-Prot
Match: TRPC_PSEA8 (Indole-3-glycerol phosphate synthase OS=Pseudomonas aeruginosa (strain LESB58) GN=trpC PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 1.043e-38 Identity = 99/237 (41.77%), Postives = 139/237 (58.65%), Query Frame = 2 Query: 44 NAPPARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGANAVLLIAAVLPDLDIRYMTNICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLF 754 +A R F AL+ +R PA+IAE+KKASPS+G+LRE F P EIARSYE GGAACLS+LTD +F+G+ L+ R+A P++ K+F++D +QI AR GA+ +LLI + L D+ + + K +GL LVEVHD E++R TFEV + T LL EI R + +VV ESG+ D+ ++ + V A LVGE+ ++ DDPG + LF Sbjct: 36 SADAPRGFANALLERAKRKE-PAVIAEIKKASPSKGVLREHFVPAEIARSYEAGGAACLSVLTDVDFFQGADAYLKEARAA-CALPVIRKDFMIDPYQIVEARAIGADCILLIVSALDDVLMAELAATAKSVGLDVLVEVHDGTELERALKTLDTPLVGINNRNLHTFEVSLETTLDLLP----EIPRDR--LVVTESGILNRADVELMEVSEVYAFLVGEAFMRADDPGLELKRLF 264 The following BLAST results are available for this feature:
BLAST of DY305782 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 399
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY305782 ID=DY305782; Name=DY305782; organism=Citrus sinensis; type=EST; length=1262bpback to top |