DY305782
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305782 vs. ExPASy Swiss-Prot
Match: TRPC_RHOPT (Indole-3-glycerol phosphate synthase OS=Rhodopseudomonas palustris (strain TIE-1) GN=trpC PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 1.362e-38 Identity = 96/242 (39.67%), Postives = 140/242 (57.85%), Query Frame = 2 Query: 2 KTEEAIIYAQNALDNAPPARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGANAVLLIAAVLPDLDIRYMTNICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDD 727 K E + + A P R F+ AL A + G LIAE+KKASPS+G++R DFDP +AR+YE GGAACLS+LTD F+GS + L A R+A V P L K+F+ D +Q+ AR GA+ +L+I A L D + + + + LG+ L+EVHD E++R TFEV ++ ++ L + K+ ++VGESG+FTP D+A + G+ LVGES+++Q D Sbjct: 20 KRERPLAAIEAIAREASPPRGFVKALRAKHA-AGDYGLIAEIKKASPSKGLIRADFDPSALARAYEAGGAACLSVLTDTPSFQGSLDYLVAARAA-VSLPALRKDFMYDTYQVVEARAHGADCILIIMAALDDAEAKDIEDAAFDLGMDVLLEVHDAPELERA-LKLRSPMVGVNNRNLRTFEVTLATSEALAP------LIPKDRLMVGESGIFTPADLARLARVGMSTFLVGESLMRQQD 252
BLAST of DY305782 vs. ExPASy Swiss-Prot
Match: TRPC_PSEAB (Indole-3-glycerol phosphate synthase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=trpC PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 1.362e-38 Identity = 99/237 (41.77%), Postives = 139/237 (58.65%), Query Frame = 2 Query: 44 NAPPARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGANAVLLIAAVLPDLDIRYMTNICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLF 754 +A R F AL+ +R PA+IAE+KKASPS+G+LRE F P EIARSYE GGAACLS+LTD +F+G+ L+ R+A P++ K+F++D +QI AR GA+ +LLI + L D+ + + K +GL LVEVHD E++R TFEV + T LL EI R + +VV ESG+ D+ ++ + V A LVGE+ ++ DDPG + LF Sbjct: 36 SADAPRGFANALLERAKRKE-PAVIAEIKKASPSKGVLREHFVPAEIARSYEAGGAACLSVLTDVDFFQGADAYLKEARAA-CALPVVRKDFMIDPYQIVEARAIGADCILLIVSALDDVLMAELAATAKSVGLDVLVEVHDGTELERALKTLDTPLVGINNRNLHTFEVSLETTLDLLP----EIPRDR--LVVTESGILNRADVELMEVSEVYAFLVGEAFMRADDPGLELKRLF 264
BLAST of DY305782 vs. ExPASy Swiss-Prot
Match: TRPC_BURPP (Indole-3-glycerol phosphate synthase OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=trpC PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 1.779e-38 Identity = 101/232 (43.53%), Postives = 136/232 (58.62%), Query Frame = 2 Query: 59 RDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGANAVLLIAAVLPDLDIRYMTNICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLF 754 RDF+GAL A + GL A+I+EVKKASPS+G+LRE F P EIARSYEK GAACLS+LTD ++F+GS LE R+A P+L K+FIVD +QI AR GA+A+LLIAA L ++ + + LGL LVEVHD E+ TFE I T +LE + IVV ESG+ + D+ ++ V LVGE+ ++ ++PG + +F Sbjct: 38 RDFVGALRAKHT-AGLAAVISEVKKASPSKGVLREHFVPAEIARSYEKHGAACLSVLTDVQFFQGSVAYLEEARAA-CNLPVLRKDFIVDPYQIVEARAMGADAILLIAAALETSQMQDLEALAHSLGLAVLVEVHDHDEL-MESLTLKTPLIGINNRNLRTFETSIETTIGMLEA------IPDDRIVVTESGILSRADVERLRAMDVHTFLVGEAFMRANEPGVELARMF 260
BLAST of DY305782 vs. ExPASy Swiss-Prot
Match: TRPC_DECAR (Indole-3-glycerol phosphate synthase OS=Dechloromonas aromatica (strain RCB) GN=trpC PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 2.324e-38 Identity = 103/249 (41.37%), Postives = 145/249 (58.23%), Query Frame = 2 Query: 14 AIIYAQNALDNAPPARDFIGALM--AANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGANAVLLIAAVLPDLDIRYMTNICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLF 754 AI+ A+ AP RDF+GA+ AN R PA+IAE+KKASPS+GI+R DF P +IARSYE+ GAACLS+LTD +YF+G E L++ R+A P+L K+F+VDA+Q+ AR GA+A+LLIAA L +++ + G+ LVEVH+ E+D TF V + T LL IVV ESG+ P+++A ++ V A LVGE+ ++ +PG + LF Sbjct: 26 AIVEAEAIAQPAP--RDFVGAIRNKIANDR---PAVIAEIKKASPSKGIIRPDFQPADIARSYEQHGAACLSVLTDRQYFQGCPEYLQSARAA-CALPVLRKDFMVDAYQVAEARAMGADAILLIAAALTLEEMQALETQASAYGMAVLVEVHNGEELD-AALQLKTPLLGINNRNLRTFAVTLETTLGLLSR------IPAGRIVVTESGILKPEEVALMRTNKVNAFLVGEAFMRVPEPGAELARLF 261
BLAST of DY305782 vs. ExPASy Swiss-Prot
Match: TRPC_XYLFM (Indole-3-glycerol phosphate synthase OS=Xylella fastidiosa (strain M12) GN=trpC PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 3.035e-38 Identity = 96/235 (40.85%), Postives = 135/235 (57.45%), Query Frame = 2 Query: 50 PPARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGANAVLLIAAVLPDLDIRYMTNICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLF 754 P R F AL A G PA+IAE+KKASPS+G+LREDF P EIA SYE GGA+CLS+LTD +FKG L R A P+L K+F +D +Q+Y AR GA+ +LLI A L D + ++ + LG+ LVEVHD E++R TF V + T + +G + R + ++V ESG+ T D+ ++ AGV A LVGE+ ++ +PG+ + +F Sbjct: 36 PTPRGFAAALQATIVH-GDPAVIAEIKKASPSKGVLREDFRPAEIAISYELGGASCLSVLTDVHFFKGHDNYLSQARDA-CTLPVLRKDFTIDPYQVYEARVLGADCILLIVAALDDAQLVDLSGLALQLGMDVLVEVHDIDELERA-IQISAPLIGINNRNLSTFNVSLETTLTM----KGLVPRDR--LLVSESGILTSADVQRLRAAGVNAFLVGEAFMRAAEPGESLREMF 261
BLAST of DY305782 vs. ExPASy Swiss-Prot
Match: TRPC_RALPJ (Indole-3-glycerol phosphate synthase OS=Ralstonia pickettii (strain 12J) GN=trpC PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 3.035e-38 Identity = 101/241 (41.91%), Postives = 137/241 (56.85%), Query Frame = 2 Query: 32 NALDNAPPARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGANAVLLIAAVLPDLDIRYMTNICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLF 754 N D+ AR F A M G A+IAEVKKASPS+G+LR +F P +IARSY + GAACLS+LTDE++F+G + L R+A P+L K+F+VD +Q+Y AR+ GA+ +LLI A L + + LG+ LVEVHD E+DR TFE + T LL+ + IVV ESG+ TPDD+ ++ A V A LVGE+ ++ DDPG + LF Sbjct: 35 NRSDSTLRARGFARA-MRDKIAAGNAAVIAEVKKASPSKGVLRPNFKPADIARSYAEHGAACLSVLTDEQFFQGHADYLREARAA-CTLPVLRKDFMVDLYQVYEARSWGADCILLIVAALDQGLMEELEACALELGMDVLVEVHDGHELDRA-LRLQTPLVGVNNRNLRTFETTLDTTLGLLKH------MPDDRIVVTESGILTPDDVRKMRAAAVNAFLVGEAFMRADDPGAELARLF 266
BLAST of DY305782 vs. ExPASy Swiss-Prot
Match: TRPC_DELAS (Indole-3-glycerol phosphate synthase OS=Delftia acidovorans (strain DSM 14801 / SPH-1) GN=trpC PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 5.176e-38 Identity = 98/241 (40.66%), Postives = 141/241 (58.51%), Query Frame = 2 Query: 59 RDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKG-----GAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGANAVLLIAAVLPDLDIRYMTNICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKLLEGERGEIIRQKNI----IVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLF 754 RDF+GAL A G +IAE+KKASPS+G++REDF P +IA+SY G AACLS+LTD+++F+GS + L+ R A P+L K+F+VD +QIY +R GA+ VLLIAA L D + M I L + LVEVHD E+DR +FEV I T L QKN+ ++V ESG+ + +D+ +++AG+ + LVGE+ ++ +PG+ + LF Sbjct: 39 RDFVGALRA-KIAAGQAGVIAEIKKASPSKGVIREDFIPADIAQSYADGDGKGVSAACLSVLTDKQFFQGSVDYLKQAR-ASCHLPVLRKDFMVDPYQIYESRAMGADCVLLIAACLDDAQMAEMEQIAHSLDMAVLVEVHDGAELDRA-LRLKTPLVGINNRNLRSFEVSIQTTLDL----------QKNVPADRLLVTESGIGSREDVKAMRDAGIHSFLVGEAFMRAKEPGEALAKLF 266
BLAST of DY305782 vs. ExPASy Swiss-Prot
Match: TRPC_BURP6 (Indole-3-glycerol phosphate synthase OS=Burkholderia pseudomallei (strain 668) GN=trpC PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 5.176e-38 Identity = 100/237 (42.19%), Postives = 139/237 (58.65%), Query Frame = 2 Query: 44 NAPPARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGANAVLLIAAVLPDLDIRYMTNICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLF 754 +A +RDF+GAL + G A+IAEVKKASPS+G+LRE F P +IARSY + GAACLS+LTDE++F+GS LE R+A P+L K+FIVDA+Q+ AR GA+A+LLIAA L + + LGL LVEVH+ E+D TFE I T +L+ + IVV ESG+ + D+ ++ AGV LVGE+ ++ ++PG + +F Sbjct: 33 SARDSRDFVGALRDKHA-AGHAAVIAEVKKASPSKGVLREHFVPADIARSYAQHGAACLSVLTDERFFQGSARYLEQARAA-CALPVLRKDFIVDAYQVLEARAMGADAILLIAAALDTPLMIDLEAYAHSLGLAVLVEVHNRSELDEA-LKLKTPLVGINNRNLRTFETTIDTTLGMLDA------IPDDRIVVTESGILSRADVERMEAAGVHTFLVGEAFMRAENPGAELARMF 260
BLAST of DY305782 vs. ExPASy Swiss-Prot
Match: TRPC_CLOTH (Indole-3-glycerol phosphate synthase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=trpC PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 6.760e-38 Identity = 89/219 (40.64%), Postives = 135/219 (61.64%), Query Frame = 2 Query: 62 DFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGANAVLLIAAVLPDLDIRYMTNICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVK 718 DF GAL + G ++IAEVKKASPS+GI++EDFDP++IA+ Y + +S+LT+ +FKG + L +R P+L K+FI+D WQIY +R GA+A+LLI ++L D +++ + +LG+ LVEVHDERE++R TFEVD+ NT+KL+ + +VV ESG+ +D+ Y++E GV AVL+GE+ ++ Sbjct: 40 DFYGAL----KNNGDISIIAEVKKASPSKGIIKEDFDPLKIAKEYVESDIQAISVLTERNFFKGDEDYLVKIRQF-CPLPILRKDFIIDLWQIYESRYIGADAILLIVSLLSDEELKKFQIVANILGMQCLVEVHDERELERA-LESGARIIGINNRDLRTFEVDLKNTEKLMNR------IPNDRVVVSESGIKDTEDLKYLKELGVDAVLIGETFMR 246
BLAST of DY305782 vs. ExPASy Swiss-Prot
Match: TRPC_CAUSK (Indole-3-glycerol phosphate synthase OS=Caulobacter sp. (strain K31) GN=trpC PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 6.760e-38 Identity = 100/252 (39.68%), Postives = 144/252 (57.14%), Query Frame = 2 Query: 2 KTEEAIIYAQNALDNAPPARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGANAVLLIAAVLPDLDIRYMTNICKMLGLTALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFEVDISNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 757 K +I + A A R F AL A+ G ALIAE+KKASPS+G++R DFDP +AR+Y GGA+CLS+LTD F+G+ L VR+A V P + K+F+VD WQ+ +R GA+A+L+I A++ D + + LG+ ALVEVHDE EM+R +F VD++ T++L + + ++V ESGLF D+A ++ AG KA+LVGES+++Q D L G Sbjct: 20 KRRRSIAQLEAAAKAANSPRGFKAAL-EADHAPGKLALIAEIKKASPSKGLIRADFDPPALARAYAAGGASCLSVLTDGPSFQGADGYLIDVRAA-VSLPCIRKDFLVDPWQVAESRALGADAILVILAMIDDAVAADLMSEAARLGMDALVEVHDEAEMERA-GKLGSTLVGINNRDLKSFVVDLAVTERL------AVQAPSDALLVTESGLFVAADVARMEAAGAKAMLVGESLMRQADVAAATRALLG 262 The following BLAST results are available for this feature:
BLAST of DY305782 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 399
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305782 ID=DY305782; Name=DY305782; organism=Citrus sinensis; type=EST; length=1262bpback to top |