DY305777
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305777 vs. ExPASy Swiss-Prot
Match: CRTI_CAPAN (Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Capsicum annuum GN=PDS PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 7.359e-23 Identity = 71/210 (33.81%), Postives = 112/210 (53.33%), Query Frame = 2 Query: 2 VAACDVPGFKRLLPSLWREMKFFNNIYELVGLPVVTVQLRYNGWVTELQDLERSRQLRQALGLDNLLYTPDADFPCFADLALTSPEDYYREGQGSLLQCVLTPGDPYMPLPNDEIIRRVAKEVLALFPSSQGLE-----VIWSSVVKIGQSLHREGPGKDPFRPDQKTPVKNLFLAGSYTKQDYIDSMEGATLSGRKTSAYICNAGEELV 616 V A V FK LLP W+E+ +F + +LVG+PV+ V + ++ R+L+ DNLL++ +AD+++T E Y + S+L+ V P + ++ + EII KE+ LFP + ++ VVK +S+++ PG +P R Q++PV+ +LAG YTKQ Y+ SMEGA LSG+ + I E LV Sbjct: 376 VFATPVDIFKLLLPEDWKEIPYFQKLEKLVGVPVINVHIWFD------------RKLKNTS--DNLLFSRSPLLSVYADMSVTCKE--YYDPNKSMLELVFAPAEEWVSRSDSEIIDATMKELAKLFPDEISADQSKAKILKYHVVKTPRSVYKTVPGCEPCRLLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYELLV 569
BLAST of DY305777 vs. ExPASy Swiss-Prot
Match: CRTI_SOYBN (Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Glycine max GN=PDS1 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 4.770e-22 Identity = 71/215 (33.02%), Postives = 114/215 (53.02%), Query Frame = 2 Query: 2 VAACDVPGFKRLLPSLWREMKFFNNIYELVGLPVVTVQLRYNGWVTELQDLERSRQLRQALGLDNLLYTPDADFPCFADLALTSPEDYYREGQGSLLQCVLTPGDPYMPLPNDEIIRRVAKEVLALFPSSQGLE-----VIWSSVVKIGQSLHREGPGKDPFRPDQKTPVKNLFLAGSYTKQDYIDSMEGATLSGRKTSAYICNAGEELVALRKQ 631 V A V K LLP W+ + +F + +LVG+PV+ V + ++ R+L+ D+LL++ +AD+++T E YY Q S+L+ V P + ++ +D+II+ E+ LFP + ++ VVK +S+++ P +P RP Q++P++ +LAG YTKQ Y+ SMEGA LSG K A EL+A R Q Sbjct: 364 VFATPVDILKLLLPDNWKGIPYFQRLDKLVGVPVINVHIWFD------------RKLKNTY--DHLLFSRSPLLSVYADMSVTCKE-YYSPNQ-SMLELVFAPAEEWISRSDDDIIQATMTELAKLFPDEISADQSKAKILKYHVVKTPRSVYKTVPNCEPCRPIQRSPIEGFYLAGDYTKQKYLASMEGAVLSG-KLCAQAIVQDSELLATRGQ 561
BLAST of DY305777 vs. ExPASy Swiss-Prot
Match: CRTI_MAIZE (Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Zea mays GN=PDS1 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 4.770e-22 Identity = 69/215 (32.09%), Postives = 113/215 (52.56%), Query Frame = 2 Query: 2 VAACDVPGFKRLLPSLWREMKFFNNIYELVGLPVVTVQLRYNGWVTELQDLERSRQLRQALGLDNLLYTPDADFPCFADLALTSPEDYYREGQGSLLQCVLTPGDPYMPLPNDEIIRRVAKEVLALFPSSQGLE-----VIWSSVVKIGQSLHREGPGKDPFRPDQKTPVKNLFLAGSYTKQDYIDSMEGATLSGRKTSAYICNAGEELVALRKQ 631 V A V FK L+P W E+ +F + +LVG+PV+ V + ++ R+L D+LL++ + +AD+++T E Y + S+L+ V P D ++ + EII +E+ LFP + ++ +VK +S+++ P +P RP Q++P++ +LAG YTKQ Y+ SMEGA LSG+ + I L ALR Q Sbjct: 362 VCATPVDIFKLLVPQEWSEITYFKKLEKLVGVPVINVHIWFD------------RKLNNTY--DHLLFSRSSLLSVYADMSVTCKE--YYDPNRSMLELVFAPADEWIGRSDTEIIDATMEELAKLFPDEIAADQSKAKILKYHIVKTPRSVYKTVPNCEPCRPLQRSPIEGFYLAGDYTKQKYLASMEGAVLSGKLCAQSIVQDYSRL-ALRSQ 559
BLAST of DY305777 vs. ExPASy Swiss-Prot
Match: CRTI_ARATH (Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Arabidopsis thaliana GN=PDS PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 6.230e-22 Identity = 69/211 (32.70%), Postives = 111/211 (52.61%), Query Frame = 2 Query: 2 VAACDVPGFKRLLPSLWREMKFFNNIYELVGLPVVTVQLRYNGWVTELQDLERSRQLRQALGLDNLLYTPDADFPCFADLALTSPEDYYREGQGSLLQCVLTPGDPYMPLPNDEIIRRVAKEVLALFPSSQGLE-----VIWSSVVKIGQSLHREGPGKDPFRPDQKTPVKNLFLAGSYTKQDYIDSMEGATLSGRKTSAYICNAGEELVA 619 V A V K LLP W+E+ +F + +LVG+PV+ V + ++ R+L+ D+LL++ +AD++LT E Y + S+L+ V P + ++ + +II KE+ LFP + ++ VVK +S+++ P +P RP Q++P++ +LAG YTKQ Y+ SMEGA LSG+ S I E L A Sbjct: 358 VFAAPVDILKLLLPDPWKEIPYFKKLDKLVGVPVINVHIWFD------------RKLKNTY--DHLLFSRSNLLSVYADMSLTCKE--YYDPNRSMLELVFAPAEEWISRTDSDIIDATMKELEKLFPDEISADQSKAKILKYHVVKTPRSVYKTIPNCEPCRPLQRSPIEGFYLAGDYTKQKYLASMEGAVLSGKFCSQSIVQDYELLAA 552
BLAST of DY305777 vs. ExPASy Swiss-Prot
Match: CRTI_SYNY3 (Phytoene dehydrogenase OS=Synechocystis sp. (strain PCC 6803) GN=pds PE=3 SV=2) HSP 1 Score: 103.99 bits (258), Expect = 1.388e-21 Identity = 64/201 (31.84%), Postives = 105/201 (52.24%), Query Frame = 2 Query: 2 VAACDVPGFKRLLPSLWREMKFFNNIYELVGLPVVTVQLRYNGWVTELQDLERSRQLRQALGLDNLLYTPDADFPCFADLALTSPEDYYREGQGSLLQCVLTPGDPYMPLPNDEIIRRVAKEVLALFPS----SQGLEVIWSSVVKIGQSLHREGPGKDPFRPDQKTPVKNLFLAGSYTKQDYIDSMEGATLSGRKTSAYI 592 V+A V K ++P+ WRE F I L G+PV+ + L ++ +T++ D+LL++ +AD++ T E Y + S+L+ VL P ++ ++EI+ E+ LFP ++ S VVK +S+++ PG+ RPDQ+T V N +LAG +T Q Y+ SMEGA LSG++ + I Sbjct: 270 VSAMPVDPLKTMVPAPWREYPEFKQIQGLEGVPVINLHLWFDRKLTDI---------------DHLLFSRSPLLSVYADMSNTCRE--YSDPDKSMLELVLAPAQDWIGKSDEEIVAATMAEIKQLFPQHFNGDNPARLLKSHVVKTPRSVYKATPGRQACRPDQRTSVPNFYLAGDFTMQKYLGSMEGAVLSGKQCAQAI 453
BLAST of DY305777 vs. ExPASy Swiss-Prot
Match: CRTI_SYNE7 (Phytoene dehydrogenase OS=Synechococcus elongatus (strain PCC 7942) GN=pds PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 3.092e-21 Identity = 64/208 (30.77%), Postives = 105/208 (50.48%), Query Frame = 2 Query: 2 VAACDVPGFKRLLPSLWREMKFFNNIYELVGLPVVTVQLRYNGWVTELQDLERSRQLRQALGLDNLLYTPDADFPCFADLALTSPEDYYREGQGSLLQCVLTPGDPYMPLPNDEIIRRVAKEVLALFPSSQGLE----VIWSSVVKIGQSLHREGPGKDPFRPDQKTPVKNLFLAGSYTKQDYIDSMEGATLSGRKTSAYICNAGEEL 613 V+A V K LLP W+ M +F + L G+PV+ + L ++ +T++ D+LL++ +AD++ T E Y + S+L+ V P ++ +++I+ E+ LFP E + +VK S+++ PG+ +RPDQ +P+ N FL G YT Q Y+ SMEGA LSG+ T+ I +EL Sbjct: 270 VSALPVDPLKLLLPDAWKAMPYFQQLDGLQGVPVINIHLWFDRKLTDI---------------DHLLFSRSPLLSVYADMSNTCRE--YEDPDRSMLELVFAPAKDWIGRSDEDILAATMAEIEKLFPQHFSGENPARLRKYKIVKTPLSVYKATPGRQQYRPDQASPIANFFLTGDYTMQRYLASMEGAVLSGKLTAQAIIARQDEL 460
BLAST of DY305777 vs. ExPASy Swiss-Prot
Match: CRTI_ORYSJ (Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Oryza sativa subsp. japonica GN=PDS PE=2 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 4.038e-21 Identity = 62/196 (31.63%), Postives = 107/196 (54.59%), Query Frame = 2 Query: 2 VAACDVPGFKRLLPSLWREMKFFNNIYELVGLPVVTVQLRYNGWVTELQDLERSRQLRQALGLDNLLYTPDADFPCFADLALTSPEDYYREGQGSLLQCVLTPGDPYMPLPNDEIIRRVAKEVLALFPSSQGLE-----VIWSSVVKIGQSLHREGPGKDPFRPDQKTPVKNLFLAGSYTKQDYIDSMEGATLSGR 574 V A V K L+P W+E+ +F + +LVG+PV+ V + ++ R+L+ D+LL++ + +AD+++T E Y + S+L+ V P + ++ + EII +E+ LFP + ++ VVK +S+++ P +P RP Q++P++ +LAG YTKQ Y+ SMEGA LSG+ Sbjct: 370 VFATPVDILKLLVPQEWKEISYFKKLEKLVGVPVINVHIWFD------------RKLKNTY--DHLLFSRSSLLSVYADMSVTCKE--YYDPNRSMLELVFAPAEEWVGRSDTEIIEATMQELAKLFPDEIAADQSKAKILKYHVVKTPRSVYKTIPDCEPCRPLQRSPIEGFYLAGDYTKQKYLASMEGAVLSGK 549
BLAST of DY305777 vs. ExPASy Swiss-Prot
Match: CRTI_ORYSI (Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Oryza sativa subsp. indica GN=PDS1 PE=2 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 4.038e-21 Identity = 62/196 (31.63%), Postives = 107/196 (54.59%), Query Frame = 2 Query: 2 VAACDVPGFKRLLPSLWREMKFFNNIYELVGLPVVTVQLRYNGWVTELQDLERSRQLRQALGLDNLLYTPDADFPCFADLALTSPEDYYREGQGSLLQCVLTPGDPYMPLPNDEIIRRVAKEVLALFPSSQGLE-----VIWSSVVKIGQSLHREGPGKDPFRPDQKTPVKNLFLAGSYTKQDYIDSMEGATLSGR 574 V A V K L+P W+E+ +F + +LVG+PV+ V + ++ R+L+ D+LL++ + +AD+++T E Y + S+L+ V P + ++ + EII +E+ LFP + ++ VVK +S+++ P +P RP Q++P++ +LAG YTKQ Y+ SMEGA LSG+ Sbjct: 370 VFATPVDILKLLVPQEWKEISYFKKLEKLVGVPVINVHIWFD------------RKLKNTY--DHLLFSRSSLLSVYADMSVTCKE--YYDPNRSMLELVFAPAEEWVGRSDTEIIEATMQELAKLFPDEIAADQSKAKILKYHVVKTPRSVYKTIPDCEPCRPLQRSPIEGFYLAGDYTKQKYLASMEGAVLSGK 549 The following BLAST results are available for this feature:
BLAST of DY305777 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305777 ID=DY305777; Name=DY305777; organism=Citrus sinensis; type=EST; length=977bpback to top |