DY305773

Overview
NameDY305773
Unique NameDY305773
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1277
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305773 vs. ExPASy Swiss-Prot
Match: CAD8C_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8C OS=Oryza sativa subsp. japonica GN=CAD8C PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 2.462e-11
Identity = 61/243 (25.10%), Postives = 99/243 (40.74%), Query Frame = 1
Query:   61 KAAVAWEAGKP---LVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHV-LPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSWASRIIGVDLNPSKFNEA-KKFGVTEFVNPKD 774
            KAAV W A      L          + ++V +K+L+  +CHTD++  +      ++P + GHE  G+V  VG GVT  + GD V +  F   C+ C  C +   N C  + + T  GV  + G    +  G           FS+  V +   V ++    PLD    L C   T +   V       G+ V +              + ++  R+  +  +P K  EA +  G  EF+  +D
Sbjct:   81 KAAVGWAARDDSGVLSPYNFSRRAQKDDDVTIKVLYCGICHTDLHIVKNDWGNAMYPVVPGHEIVGVVTGVGAGVTKFKAGDTVGVGYFVASCRGCECCGNGYENYCAKM-VTTCNGVDHDHGGGAATQGG-----------FSDAIVVNEHYVLRVPAGLPLDSAAPLLCAGVTVYSPMVIHGLNAPGKHVGVVGLGGLGHVAVKFAK-AFGMRVTVISTSPGKRQEALEHLGADEFLVSRD 310          
BLAST of DY305773 vs. ExPASy Swiss-Prot
Match: ADH2_YEAST (Alcohol dehydrogenase 2 OS=Saccharomyces cerevisiae GN=ADH2 PE=1 SV=3)

HSP 1 Score: 68.9366 bits (167), Expect = 7.162e-11
Identity = 54/237 (22.78%), Postives = 91/237 (38.40%), Query Frame = 1
Query:   61 KAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPL-FPRIFGHEAGGIVESVGEGVTDLQPGDHV-LPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSWASRIIGVDLNPSKFNEAKKFGVTEFVN 765
            KA + +E+   L  +++ V  P+ NE+ + + ++ +CHTD++ W      P   P + GHE  G+V  +GE V   + GD+  +    G C  C +C     + C     + D     +DG                  +F EY        A I     L +V  + C   T + A +  A  + G   AI                +   R++G+D  P K       G   F++
Sbjct:    8 KAIIFYESNGKLEHKDIPVPKPKPNELLINVKYSGVCHTDLHAWHGDWPLPTKLPLVGGHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCP----HADLSGYTHDG------------------SFQEYATADAVQAAHIPQGTDLAEVAPILCAGITVYKA-LKSANLRAGHWAAISGAAGGLGSLAVQYAKAMGYRVLGIDGGPGKEELFTSLGGEVFID 221          
BLAST of DY305773 vs. ExPASy Swiss-Prot
Match: YJJN_ECOLI (Uncharacterized zinc-type alcohol dehydrogenase-like protein yjjN OS=Escherichia coli (strain K12) GN=yjjN PE=3 SV=3)

HSP 1 Score: 68.5514 bits (166), Expect = 9.354e-11
Identity = 31/99 (31.31%), Postives = 52/99 (52.53%), Query Frame = 1
Query:   88 KPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRI 384
            K LV ++ E+  P  NE  +KI    +C TD++ W        +PR+ GHE  G +  +G+ + DL+ G  V  +    C++CP C S  +N C+ + +
Sbjct:   13 KELVWKQREIPIPGDNEALIKIKSVGICGTDIHAWGGNQPFFSYPRVLGHEICGEIVGLGKNIADLKNGQQVAVIPYVACQQCPACKSGRTNCCEKISV 111          
The following BLAST results are available for this feature:
BLAST of DY305773 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
CAD8C_ORYSJ2.462e-1125.10Probable cinnamyl alcohol dehydrogenase 8C OS=Oryz... [more]
ADH2_YEAST7.162e-1122.78Alcohol dehydrogenase 2 OS=Saccharomyces cerevisia... [more]
YJJN_ECOLI9.354e-1131.31Uncharacterized zinc-type alcohol dehydrogenase-li... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAM2BB10RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305773 ID=DY305773; Name=DY305773; organism=Citrus sinensis; type=EST; length=1277bp
GTGAGAGTATCATCATTCATCATCAATATGTCTGGCACAGCTGGTCAAGT
TATTCGCTGCAAAGCGGCGGTGGCATGGGAGGCGGGGAAGCCACTGGTGA
TTGAAGAAGTGGAGGTGGCTCCACCACAGAAAAATGAAGTTCGATTGAAG
ATCCTCTTCACCTCTTTATGCCATACTGATGTTTACTTCTGGGAAGCCAA
GGGACAAACACCTCTCTTTCCTCGCATTTTTGGTCACGAAGCTGGAGGGA
TTGTAGAAAGTGTAGGGGAGGGGGTAACTGATCTCCAACCAGGAGACCAT
GTTCTTCCTGTGTTCACAGGAGAGTGCAAGGAATGTCCTCACTGTCATTC
AGAGGAAAGCAATATGTGTGACCTCCTCAGGATCAATACTGACAGGGGTG
TTATGATTAATGATGGTCAGTCGAGATTCTCGATTAAGGGGAAGCCAATT
TACCATTTTGTGGGCACTTCTACCTTCAGTGAATACACTGTTACCCATGT
CGGTTGTGTTGCTAAGATCAATCCTGCTGCCCCTCTTGACAAAGTTTGTG
TGCTTAGCTGTGGAATCTCCACAGGTTTTGGGGCTACTGTTAATGTCGCC
AAACCGAAGAAGGGCCAGTCTGTTGCCATTTTTGGATTGGGTGCAGTTGG
CCTCGCTGCTGCCGAAGGGGCAAGGGTATCATGGGCTTCCAGGATCATTG
GTGTTGATTTGAACCCAAGCAAATTCAATGAAGCCAAAAAGTTTGGGGTT
ACCGAGTTTGTGAATCCAAAAGATTATGACAAACCCTGTTCAAAAGGGGA
TTGGCTGAATGACCAATGGGTGGAATGGAAAAAAATGTTGAATGTACCGG
AAACCGTCCGGCCCATGAATTCCGCAATTTGAATGGCTTTCCCAAAGGTT
GGGGGTGTTGCTGGGCTTGTGGTGTGTGCAAAACAAAAATAAATGATTTC
CAAAAACCCTCCCCCGGAAACCTGCTTAAAAAAAAGGAAATCTTAAAGGG
AACCTTTTCTTTGTGAAACCTTCCAACCCCCCCTCTCTGAACTTTCCTTT
TCGGTTTTATTAAAAAATAACGACAACCCAAGAAAATTGGTAGAGGCGAA
AAAAATTCTCTCCCCCCCCACCAACGGGGCCCCCTTTCCCCCGAAAAAAA
AAAAAAAAAGGGGAACTTTTTAAACCCCCCTCAGAGCGCTGGGGGAGGGA
AAAAAAAAACATACATAAATGAGTTCGCCCAGACAACCCATACCCTGAAG
CTAGGGGGGGCGACGGCCAGGATGATT
back to top