DY305768

Overview
NameDY305768
Unique NameDY305768
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1179
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY305768 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSJ (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. japonica GN=20ox2 PE=1 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 2.997e-11
Identity = 26/73 (35.62%), Postives = 43/73 (58.90%), Query Frame = 1 
Query:  475 GIEKGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWD*CAPI 693
            G+E+GY ++ F  ++      + + YPPCP+P+   G   H D   + +L QDD V GL++L DG+W   +P+
Sbjct:  212 GVERGYYREFFADSSSIM---RCNYYPPCPEPERTLGTGPHCDPTALTILLQDD-VGGLEVLVDGEWRPVSPV 280

HSP 2 Score: 35.039 bits (79), Expect = 2.997e-11
Identity = 14/32 (43.75%), Postives = 22/32 (68.75%), Query Frame = 2 
Query:  683 VPPLRHSIVVNLGDQIEVITNGKYKSVEHRVV 778
            V P+  ++V+N+GD    ++NG+YKS  HR V
Sbjct:  277 VSPVPGAMVINIGDTFMALSNGRYKSCLHRAV 308
[Close]
BLAST of DY305768 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSI (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. indica GN=20ox2 PE=1 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 2.997e-11
Identity = 26/73 (35.62%), Postives = 43/73 (58.90%), Query Frame = 1 
Query:  475 GIEKGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWD*CAPI 693
            G+E+GY ++ F  ++      + + YPPCP+P+   G   H D   + +L QDD V GL++L DG+W   +P+
Sbjct:  212 GVERGYYREFFADSSSIM---RCNYYPPCPEPERTLGTGPHCDPTALTILLQDD-VGGLEVLVDGEWRPVSPV 280

HSP 2 Score: 35.039 bits (79), Expect = 2.997e-11
Identity = 14/32 (43.75%), Postives = 22/32 (68.75%), Query Frame = 2 
Query:  683 VPPLRHSIVVNLGDQIEVITNGKYKSVEHRVV 778
            V P+  ++V+N+GD    ++NG+YKS  HR V
Sbjct:  277 VSPVPGAMVINIGDTFMALSNGRYKSCLHRAV 308
The following BLAST results are available for this feature:
BLAST of DY305768 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
GAOX2_ORYSJ2.997e-1135.62Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. ja... [more]
GAOX2_ORYSI2.997e-1135.62Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. in... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM2BB03RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305768 ID=DY305768; Name=DY305768; organism=Citrus sinensis; type=EST; length=1179bp
GACAAACACATACACATACACAAACACTCACAAACACACAGCTTGTTAAA
GAAAGAATTCAGAGATATGGAGAACTTCCCCGTTATCAGCTTGGAGAACA
TCAATGGTGCTGAAAGAGCGGCTATCTTGGAGAAGATCAACGAGGCCTGT
GAGAAATGGGGCTTCTTTGAGCTGGTGAATCATGGAATTGAGCCGGAGTT
TATGGACACAGTGGAGAGATTGACCAAGGCGCATTACAGAAAATGCATGG
AGCAAAGATTCAAGGAGCTTGTTGCAAGCAGGGCACTTGAAGGTATCCAA
ACCGAGGTCAATGACATGGACTGGGAAAGCACTTTCTATGTGCGTCACCT
CCCTCAGTCGACCATCAATGAAGTCCCAGATCTTGATGAGGAATACAGGA
AGGTGATGAAGGAATTTGCATTGAAATTGGAGAAATTAGCAGAGGAGCTA
TTGGACTTGTTATGCGAGAATCTTGGAATAGAGAAGGGGTACTTGAAAAA
GGTCTTTCATGGGGCAAACGGACCAACCTTTGGTACCAAAGTTAGCAACT
ACCCACCATGCCCCAAGCCAGATTTGATCAAGGGTCTCCGGGCTCACACC
GACGCCGGCGGCATCATCTTGCTCTTCCAGGATGACAAAGTCAGTGGCCT
TCAGCTTCTTAAAGATGGCCAGTGGGATTGATGTGCCCCCATTGCGCCAC
TCCATTGTTGTCAACCTCGGTGACCAAATTGAGGTGATCACCAATGGAAA
GTACAAGAGTGTGGAGCACAGAGTGGTTTCTCAAACCGACGGCGAGGGGC
CGGATGGTCCTAGCTTCATTCTACAATCCTGGAAGTGATGCTGTGATCTA
TCCAGCACCAGCATTGCCTGAAAAAGAAGCTGAGAGGAAACAAGTGTACC
CAAAATTTTGGTTTTTGAAGACTACATGAAAGCTCCATGTTCCCCCTCCA
GTTCCAGGGCCAGGAAACAAAGAATTGAACCCCATGAAAGGCTGTGGGAA
CTTAATGTTTAACTTGGGGGCCCAATCCCCCCGGCCTTAAACTAATAAGG
TTAAAACCAAATTTATTTTTAACCGGGCCGGGAAGGGGGGGGGGACATCC
ATTTTAAAATATTATTTTGAAAAAACAGAAAACCAAAGGGTAACCAAACC
CCCGGGGGTAAAATAAATCTCTCCTCTCC
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