DY305767

Overview
NameDY305767
Unique NameDY305767
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1151
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY305767 vs. ExPASy Swiss-Prot
Match: WRK44_ARATH (WRKY transcription factor 44 OS=Arabidopsis thaliana GN=WRKY44 PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 6.226e-11
Identity = 35/90 (38.89%), Postives = 50/90 (55.56%), Query Frame = 2 
Query:  551 NAKQSRIFVKADSKDSSLIVKDGHQWRKYGQKVTKDNPSPRAYFRCSMASSGCPVKKKVQRCMEDKSFLVATYEXEHNHDVSCSSLGQSS 820
            N KQS     +     S  ++DG +WRKYGQKV   N  PR+Y+RC+  S+ C  +K V+R  +D    + TYE +HNH +  S    S+
Sbjct:  329 NEKQSSEAGVSQGSVESDSLEDGFRWRKYGQKVVGGNAYPRSYYRCT--SANCRARKHVERASDDPRAFITTYEGKHNHHLLLSPPSSST 416
The following BLAST results are available for this feature:
BLAST of DY305767 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
WRK44_ARATH6.226e-1138.89WRKY transcription factor 44 OS=Arabidopsis thalia... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM2BB02RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305767 ID=DY305767; Name=DY305767; organism=Citrus sinensis; type=EST; length=1151bp
GATTTGATTTTCACAGACATCTCCTTGTGGGGGGTTGTAAAGAACCAACC
AATACCAAATTCATTTCTTCTCCCCCACCATATAGAGGAAAAATTCAGCA
GCCGCCATGCACCGGTTATGGATTGGTCGTCAAAGTCCGTCCTCTTTTTC
TTTTATCTTCATAACCGCGTGAACAAAACGGTGTCTCGGTGCTACCAACT
ATTCGAATTATCTCATTTATTCGTTAGGGTTTCTATAGCTCTATTATAAT
TATATCTTATATTTATATATATCAGCTTTACTTTCAACAAATTCTAGCTC
GCCTTCATCCAAATTCATGGATTCTCACAACTCTCCTAAAGAAAAGATGA
AATTGCTGCAAGCGAAATTGGAACATGTTCGCAAACAGAATGAGAATCTG
AGGCATCTGGTGAAAGCAATGAATAATCAATGCAATGATCTCCTGGCACG
TATCCACGAAGCTAATAGAACATATTCCTCCTCTGATCATCATCACTTCA
ACAATAATATTAATATTGGAGGAGTCACAGCACAAGTTCCTCCTGTTCCA
AATGCCAAGCAATCAAGAATCTTTGTGAAAGCAGATTCTAAGGACAGTAG
CCTTATCGTGAAAGATGGACATCAATGGAGAAAGTACGGCCAAAAGGTTA
CTAAAGATAATCCCTCACCTCGGGCTTATTTCAGATGTTCAATGGCTTCT
TCTGGATGTCCTGTAAAAAAAAAGGTTCAAAGATGCATGGAGGACAAGTC
ATTTCTCGTTGCAACTTATGAANGAGAACACAACCATGATGTTTCATGTA
GCTCACTTGGGCAATCCTCCTCTTTTAACAATATTGCTCACCCAAAGCTC
AATTGTACATTGCCCAGAATATCAAACAACTGATTCTTTTGGATCAGATG
TCACACTTGATCTTACTCTATCTGGGGTCCATCAGGAAACTAAAACCCCC
TAAAAACTCAATGCAAGTCCGGGACGATAAAAAAAAATTGAAAAATATGG
GGGCATCTTTAACTAAAGATTCCAGCTTCCCCAAACCTGGAACCCAAGGC
CGGTGCCAATTTCCTCCAGGGGCCCCCCCCCAAAAACCAAGGGGGAAAAA
TTTGGGGGAAGGGAAAAACGGGGAATTTTTGTATCTTAAATTCCAAAAAC
T
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