DY305766

Overview
NameDY305766
Unique NameDY305766
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1045
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305766 vs. ExPASy Swiss-Prot
Match: VATE_YEAST (V-type proton ATPase subunit E OS=Saccharomyces cerevisiae GN=VMA4 PE=1 SV=4)

HSP 1 Score: 115.161 bits (287), Expect = 6.628e-25
Identity = 70/217 (32.26%), Postives = 119/217 (54.84%), Query Frame = 2
Query:  143 INNLIKSKDPAKMNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEKQVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQSLLRLKEPAVLLRCRKDDHHLVESVLESAKEEYAQKLQVHPPEIIVDHHIYLXXXXXXXXXXXXSCSXGVVVASRDGKIVCENTL 793
            +++ I +  P ++ND     ++ +M  FIR+EAEEKA EI + A++E+ IEK  +V  E   I   ++ K K+  + ++I  S   N  R+KVL A++  +  + E   +++  ++ + + YK +L+ LIV++LL+L EP  +++  + D  L+ES+ +    EY +K Q  P E IV  + YL              S GVVV++   KI   NTL
Sbjct:    1 MSSAITALTPNQVND-----ELNKMQAFIRKEAEEKAKEIQLKADQEYEIEKTNIVRNETNNIDGNFKSKLKKAMLSQQITKSTIANKMRLKVLSAREQSLDGIFEETKEKLSGIANNRDEYKPILQSLIVEALLKLLEPKAIVKALERDVDLIESMKDDIMREYGEKAQRAPLEEIVISNDYLNKDL---------VSGGVVVSNASDKIEINNTL 203          
BLAST of DY305766 vs. ExPASy Swiss-Prot
Match: VATE_CANAL (V-type proton ATPase subunit E OS=Candida albicans GN=VMA4 PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 9.571e-24
Identity = 62/205 (30.24%), Postives = 112/205 (54.63%), Query Frame = 2
Query:  179 MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEKQVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQSLLRLKEPAVLLRCRKDDHHLVESVLESAKEEYAQKLQVHPPEIIVDHHIYLXXXXXXXXXXXXSCSXGVVVASRDGKIVCENTL 793
            ++D  V  ++ +M  FI +EA+EKA EI + A+EE+ IEK  +V +E   I   YE+K K+  + ++I  S   N +R+++L  +D+++  + + A  E+  +++D   YK +L GLI + +L L EP V ++ R+ D  + +  +  A + + +K +    EI +D   +L              + G+VV +  GKI  +NTL
Sbjct:    3 LSDEQVKSELSKMQAFIEKEAKEKAKEIKLKADEEYEIEKASIVRSETAAIDSTYEQKLKKASLAQQITKSTIGNKTRLRILSTKDEVLHEIFDEAEAELKKITKDKKQYKPVLVGLIEEGVLALMEPKVSIKVREQDVDVAKEAITEAAKNFEEKAK-FKVEISIDDKNFL----------AKDIAGGIVVVNGSGKIEVDNTL 196          
BLAST of DY305766 vs. ExPASy Swiss-Prot
Match: VATE_NEUCR (V-type proton ATPase subunit E OS=Neurospora crassa GN=vma-4 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.250e-23
Identity = 63/204 (30.88%), Postives = 106/204 (51.96%), Query Frame = 2
Query:  179 MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEKQVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQSLLRLKEPAVLLRCRKDDHHLVESVLESAKEEYAQKLQVHPPEIIVDHHIYLXXXXXXXXXXXXSCSXGVVVASRDGKIVCENT 790
            ++D  V +++++M  FI+QEAEEKA EI + A+EEF IEK +LV  E   I   Y +K KQ ++ ++I  S   N +R++VL A+ +L+  + EAAS ++   + D   YK +L+ LI++    + EP +++R R+ D+  V      A  +Y  K        I                     + G+++   +GKI  +NT
Sbjct:    7 LSDDQVGQELRKMTAFIKQEAEEKAREIQIKADEEFAIEKSKLVRQETDAIDSAYAKKFKQAQMSQQITRSTMANKTRLRVLGARQELLDEIFEAASAQLGQATHDLGRYKDILRDLILEGFYAMNEPELVIRARQADYDAVREAAGWASAQYKHKTDKDVKATI-----------DAENPVPEGSAGGIIIVGGNGKIDIDNT 199          
BLAST of DY305766 vs. ExPASy Swiss-Prot
Match: VATE_SCHPO (V-type proton ATPase subunit E OS=Schizosaccharomyces pombe GN=vma4 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 3.764e-20
Identity = 62/205 (30.24%), Postives = 107/205 (52.20%), Query Frame = 2
Query:  179 MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEKQVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQSLLRLKEPAVLLRCRKDDHHLVESVLESAKEEYAQKLQVHPPEIIVDHHIYLXXXXXXXXXXXXSCSXGVVVASRDGKIVCENTL 793
            ++D  V  ++ +MV FI+QEA EKA EI   +EEEF +EK ++V  +   I Q Y+ K K+  + +KI  S  LN SR+++L ++  ++ ++     K++  + +  ++Y K +  LIVQ++  L EP  ++  R+ D  +V++ +  A E    K      E+  +   +L            S   GVV+    GKI  +NTL
Sbjct:    3 LSDEQVQAEMHKMVSFIKQEALEKAKEIHTLSEEEFQVEKAKIVREQCDAIDQTYDMKLKRASMAQKIAKSNVLNKSRLEILNSKQKVIDDIFSRVEKKLDGIEQKKDAYTKFMADLIVQAMELLGEPVGIVYSRQRDAEIVKAAIPKATEVLKSKNGSIDYELDAETDDFL----------NDSVLGGVVLVGLGGKIRVDNTL 197          
The following BLAST results are available for this feature:
BLAST of DY305766 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
VATE_YEAST6.628e-2532.26V-type proton ATPase subunit E OS=Saccharomyces ce... [more]
VATE_CANAL9.571e-2430.24V-type proton ATPase subunit E OS=Candida albicans... [more]
VATE_NEUCR1.250e-2330.88V-type proton ATPase subunit E OS=Neurospora crass... [more]
VATE_SCHPO3.764e-2030.24V-type proton ATPase subunit E OS=Schizosaccharomy... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM2BA11RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305766 ID=DY305766; Name=DY305766; organism=Citrus sinensis; type=EST; length=1045bp
TGCCGAATCGGCACGAGGGGGACTCGTCACTCGTGATCGTAAATTATAGG
AAGCAGGAAAACCCACCTGTTACTAACCTTACCCGCACCGTCTGTCTCTC
CTTAGCGATCGAAGAAAGTCGAATCGCTCTTCTCATTTTGATATCAACAA
TCTAATCAAATCAAAAGATCCCGCGAAAATGAACGACGCTGATGTTTCGA
AGCAGATCCAGCAGATGGTGCGGTTTATCCGCCAAGAAGCTGAAGAGAAA
GCCAACGAGATCTCAGTTTCTGCCGAAGAAGAATTCAACATAGAGAAGTT
GCAGCTGGTGGAAGCAGAGAAGAAGAAGATCAGACAAGAGTACGAGCGGA
AAGAGAAGCAAGTCGAAATCAGAAAGAAGATTGAGTACTCCATGCAGCTG
AATGCTTCTCGGATCAAAGTTCTTCAAGCTCAGGATGATTTGGTCAGTAA
TATGATGGAGGCAGCATCAAAGGAGGTTTTGAATGTGAGTCGCGATCACA
ATTCATATAAGAAGCTTTTGAAGGGTCTTATTGTTCAGAGTTTGCTCAGG
CTGAAAGAGCCAGCTGTGTTACTGAGATGCCGCAAAGATGACCATCATTT
GGTGGAGTCTGTTTTGGAGTCAGCAAAAGAGGAATATGCACAGAAATTGC
AGGTTCACCCACCAGAGATAATTGTGGATCATCACATCTATCTTCCGCCT
GGCCCTGGCCATCATAATGCCCATGGTCCATCCTGCTCANGAGGTGTCGT
GGTGGCTTCTCGAGATGGGAAGATAGTATGTGAGAATACCTTGATGCACG
GTTGGATGTTGTGTTCCGTAAAAACCTCCTGAGATCCGGGAACAGCTCGT
CAGTCAAGGTGCTGCATGATGAATTAATTGAAATGTTTGTCACCCTCTGT
TATTCCTGTCCGAAGTTTTTAATTTTAGTTAATGACCATAAAATTTAATA
TTTCTGGGTTGTTTTCCTATTTTAATTTATAATGTTTGCCGAAAAACCTT
TATTTTGGAAAAACCGTGGAACCTGGTCCTTGGGATTTGGGGGCT
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