DY305751
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305751 vs. ExPASy Swiss-Prot
Match: RL18_NATPD (50S ribosomal protein L18P OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rpl18p PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 3.838e-12 Identity = 56/196 (28.57%), Postives = 81/196 (41.33%), Query Frame = 1 Query: 82 RFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTL 669 R+ V +RRRE +T+Y R+RL+ K R V R +N AQ+V GD +A+A + +L +G E N AAY TGLL +R ++ G D A+LD+GL T GN+VF +PH++ FA + + G H+A Y L Sbjct: 6 RYTVPMRRRREARTNYHQRLRLLKSGKP-------RLVARKSNNQTKAQLVVTGPQGDETVASATSADLEAFGWEAPTGNLPAAYLTGLLAGKRAIE--------------AGLD------------EAVLDIGLNTATPGNKVFAVQEGVIDAGLEVPHNEDVFADWQR-------------TRGAHIAEYAEQL 155
BLAST of DY305751 vs. ExPASy Swiss-Prot
Match: RL18_SULIY (50S ribosomal protein L18P OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=rpl18p PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 5.013e-12 Identity = 59/234 (25.21%), Postives = 102/234 (43.59%), Query Frame = 1 Query: 85 FQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHEL-PRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDADGLEALYKKVHAAIRA 783 +++K +RRREGKT+Y R + + + RF+VR TNK +I QI + GD ++A+A++ EL ++ + N +AY TG L A R +K +G E + D+GL + GN+VF IP D + I G H+A Y L + + Y F+ Y+ +G++ + L + ++++ I++ Sbjct: 7 YKIKPRRRREGKTNYYKRYVYVI-------SKQIRFIVRITNKYVIVQIAKIDPKGDIMVASAHSSELTKKFEWKGDENNTPSAYLTGYLAALRAVK--------KGVTE------------------CVADIGLHVPSKGNKVFYAIKGAIDAGLKIPIG--------------DISIENDRIKGEHIAKYAEKLKSENLDLYNKLFSRYLGRGLNPENLPSHFEEILNKIKS 193
BLAST of DY305751 vs. ExPASy Swiss-Prot
Match: RL18_SULIM (50S ribosomal protein L18P OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=rpl18p PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 5.013e-12 Identity = 59/234 (25.21%), Postives = 102/234 (43.59%), Query Frame = 1 Query: 85 FQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHEL-PRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDADGLEALYKKVHAAIRA 783 +++K +RRREGKT+Y R + + + RF+VR TNK +I QI + GD ++A+A++ EL ++ + N +AY TG L A R +K +G E + D+GL + GN+VF IP D + I G H+A Y L + + Y F+ Y+ +G++ + L + ++++ I++ Sbjct: 7 YKIKPRRRREGKTNYYKRYVYVI-------SKQIRFIVRITNKYVIVQIAKIDPKGDIMVASAHSSELTKKFEWKGDENNTPSAYLTGYLAALRAVK--------KGVTE------------------CVADIGLHVPSKGNKVFYAIKGAIDAGLKIPIG--------------DISIENDRIKGEHIAKYAEKLKSENLDLYNKLFSRYLGRGLNPENLPSHFEEILNKIKS 193
BLAST of DY305751 vs. ExPASy Swiss-Prot
Match: RL18_SULIL (50S ribosomal protein L18P OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=rpl18p PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 5.013e-12 Identity = 59/234 (25.21%), Postives = 102/234 (43.59%), Query Frame = 1 Query: 85 FQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHEL-PRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDADGLEALYKKVHAAIRA 783 +++K +RRREGKT+Y R + + + RF+VR TNK +I QI + GD ++A+A++ EL ++ + N +AY TG L A R +K +G E + D+GL + GN+VF IP D + I G H+A Y L + + Y F+ Y+ +G++ + L + ++++ I++ Sbjct: 7 YKIKPRRRREGKTNYYKRYVYVI-------SKQIRFIVRITNKYVIVQIAKIDPKGDIMVASAHSSELTKKFEWKGDENNTPSAYLTGYLAALRAVK--------KGVTE------------------CVADIGLHVPSKGNKVFYAIKGAIDAGLKIPIG--------------DISIENDRIKGEHIAKYAEKLKSENLDLYNKLFSRYLGRGLNPENLPSHFEEILNKIKS 193
BLAST of DY305751 vs. ExPASy Swiss-Prot
Match: RL18_SULIK (50S ribosomal protein L18P OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=rpl18p PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 5.013e-12 Identity = 59/234 (25.21%), Postives = 102/234 (43.59%), Query Frame = 1 Query: 85 FQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHEL-PRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDADGLEALYKKVHAAIRA 783 +++K +RRREGKT+Y R + + + RF+VR TNK +I QI + GD ++A+A++ EL ++ + N +AY TG L A R +K +G E + D+GL + GN+VF IP D + I G H+A Y L + + Y F+ Y+ +G++ + L + ++++ I++ Sbjct: 7 YKIKPRRRREGKTNYYKRYVYVI-------SKQIRFIVRITNKYVIVQIAKIDPKGDIMVASAHSSELTKKFEWKGDENNTPSAYLTGYLAALRAVK--------KGVTE------------------CVADIGLHVPSKGNKVFYAIKGAIDAGLKIPIG--------------DISIENDRIKGEHIAKYAEKLKSENLDLYNKLFSRYLGRGLNPENLPSHFEEILNKIKS 193
BLAST of DY305751 vs. ExPASy Swiss-Prot
Match: RL18_SULIA (50S ribosomal protein L18P OS=Sulfolobus islandicus (strain M.16.27) GN=rpl18p PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 5.013e-12 Identity = 59/234 (25.21%), Postives = 102/234 (43.59%), Query Frame = 1 Query: 85 FQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHEL-PRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDADGLEALYKKVHAAIRA 783 +++K +RRREGKT+Y R + + + RF+VR TNK +I QI + GD ++A+A++ EL ++ + N +AY TG L A R +K +G E + D+GL + GN+VF IP D + I G H+A Y L + + Y F+ Y+ +G++ + L + ++++ I++ Sbjct: 7 YKIKPRRRREGKTNYYKRYVYVI-------SKQIRFIVRITNKYVIVQIAKIDPKGDIMVASAHSSELTKKFEWKGDENNTPSAYLTGYLAALRAVK--------KGVTE------------------CVADIGLHVPSKGNKVFYAIKGAIDAGLKIPIG--------------DISIENDRIKGEHIAKYAEKLKSENLDLYNKLFSRYLGRGLNPENLPSHFEEILNKIKS 193
BLAST of DY305751 vs. ExPASy Swiss-Prot
Match: RL18_METAC (50S ribosomal protein L18P OS=Methanosarcina acetivorans GN=rpl18p PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 9.454e-11 Identity = 56/206 (27.18%), Postives = 94/206 (45.63%), Query Frame = 1 Query: 82 RFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQS 699 R++V ++RRREG+T+Y R++L+ ++ R VVR +++++ Q+++ GD ++A ++EL +YG N AAY TGLL LK L+ YEG + LD+GL ++ G+RV+ IP S + F + I G H+A Y D PE++++ Sbjct: 6 RYKVPFRRRREGRTNYHLRLKLLLSRQD-------RVVVRKSSRNVQIQLIAPTPDGDITYSSAVSNELAKYGYTGATGNTTAAYLTGLLFG---LKSLQKG--YEGGI---------------------LDIGLQASSAGSRVYAALKGVVDSGFEIPCSPEVFPPDER-------------IRGEHIAGYREE-SSDLPEQFEA 164 The following BLAST results are available for this feature:
BLAST of DY305751 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 97
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305751 ID=DY305751; Name=DY305751; organism=Citrus sinensis; type=EST; length=1057bpback to top |