DY305749

Overview
NameDY305749
Unique NameDY305749
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1275
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305749 vs. ExPASy Swiss-Prot
Match: UCP1_MOUSE (Mitochondrial brown fat uncoupling protein 1 OS=Mus musculus GN=Ucp1 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 5.591e-16
Identity = 48/158 (30.38%), Postives = 74/158 (46.84%), Query Frame = 3
Query:  264 TSGLAVAVATAVTHPLDVLKVRLQMQFVGQKGP---LNGMGRLFLQILKKEGPKSLYLGLTPALTRSILYGGLRLGLYEP-SKYACDWAFGSTNILVKIXXXXXXXXXXXXLTNPTEVLKVRLQMNSSM-----KQSGSIAEMRRLISEEGIRALWKG 710
            ++G++  +A  +T PLD  KVRLQ+Q  GQ        G+      + K EG   LY GL   + R I +  LR+GLY+   +Y         ++  KI            +  PTEV+KVR+Q  S +     + +G+    R + + E +  LWKG
Sbjct:   19 SAGVSACLADIITFPLDTAKVRLQIQGEGQASSTIRYKGVLGTITTLAKTEGLPKLYSGLPAGIQRQISFASLRIGLYDSVQEYFSSGRETPASLGNKISAGLMTGGVAVFIGQPTEVVKVRMQAQSHLHGIKPRYTGTYNAYRVIATTESLSTLWKG 176          

HSP 2 Score: 35.8094 bits (81), Expect = 5.591e-16
Identity = 22/69 (31.88%), Postives = 32/69 (46.38%), Query Frame = 2
Query:  695 SSMERGVGPXXXXXXXXXXXXXXXYDESKRILIRWTPS*EGFHLHLISSAVAGTMNTLITAPVDMVKTR 901
            S++ +G  P               YD  K  L+      +    HL+S+ VAG   TL+ +PVD+VKTR
Sbjct:  171 STLWKGTTPNLMRNVIINCTELVTYDLMKGALVNNKILADDVPCHLLSALVAGFCTTLLASPVDVVKTR 239          
BLAST of DY305749 vs. ExPASy Swiss-Prot
Match: UCP1_PHOSU (Mitochondrial brown fat uncoupling protein 1 OS=Phodopus sungorus GN=UCP1 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.228e-15
Identity = 49/158 (31.01%), Postives = 74/158 (46.84%), Query Frame = 3
Query:  264 TSGLAVAVATAVTHPLDVLKVRLQMQFVGQKGP---LNGMGRLFLQILKKEGPKSLYLGLTPALTRSILYGGLRLGLYEP-SKYACDWAFGSTNILVKIXXXXXXXXXXXXLTNPTEVLKVRLQMNSSM-----KQSGSIAEMRRLISEEGIRALWKG 710
            ++G+A  +A  +T PLD  KVRLQ+Q  GQ        G+      + K EG   LY GL   + R I +  LR+GLY+   +Y          ++ +I            +  PTEV+KVRLQ  S +     + +G+    R + + E +  LWKG
Sbjct:   19 SAGVAACLADIITFPLDTAKVRLQIQGEGQTSSTIRYKGVLGTITTLAKTEGLPKLYSGLPAGIQRQISFASLRIGLYDTVQEYFSSGKETPPTLVNRISAGLMTGGVAVFIGQPTEVVKVRLQAQSHLHGIKPRYTGTYNAYRIIATTESLSTLWKG 176          

HSP 2 Score: 32.7278 bits (73), Expect = 1.228e-15
Identity = 20/69 (28.99%), Postives = 30/69 (43.48%), Query Frame = 2
Query:  695 SSMERGVGPXXXXXXXXXXXXXXXYDESKRILIRWTPS*EGFHLHLISSAVAGTMNTLITAPVDMVKTR 901
            S++ +G  P               YD  K  L+      +    HL+S+ VAG   T + +P D+VKTR
Sbjct:  171 STLWKGTTPNLLRNVIINCTELVTYDLMKGALVNNQILADDVPCHLLSALVAGFCTTFLASPADVVKTR 239          
BLAST of DY305749 vs. ExPASy Swiss-Prot
Match: UCP1_CANFA (Mitochondrial brown fat uncoupling protein 1 OS=Canis familiaris GN=UCP1 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.595e-15
Identity = 52/172 (30.23%), Postives = 77/172 (44.77%), Query Frame = 3
Query:  228 STTPSHIVHHFGTSGLAVAVATAVTHPLDVLKVRLQMQFVGQKGP-----LNGMGRLFLQILKKEGPKSLYLGLTPALTRSILYGGLRLGLYEPSKYACDWAFGSTNIL-VKIXXXXXXXXXXXXLTNPTEVLKVRLQMNSSM-----KQSGSIAEMRRLISEEGIRALWKG 710
            S  P  +      +  A  +A  +T PLD  KVRLQ+Q  GQ  P       G+      + + EG + LY GL   L R + +  LR+GLY+  +       G+   L  +I            +  PTEV+KVRLQ  S +     + +G+    R + + EG+  LWKG
Sbjct:    7 SDAPPTLSVRIAAAAGAACLADMITFPLDTAKVRLQIQGEGQGQPPRAPRYRGVLGTVATLARTEGLQKLYSGLPAGLQRQVGFASLRIGLYDSVREWLSPGQGAAASLGSRISAGVMTGGAAVFIGQPTEVVKVRLQAQSHLHGRKPRYTGTYNAYRIIATTEGLTGLWKG 178          

HSP 2 Score: 34.2686 bits (77), Expect = 1.595e-15
Identity = 17/45 (37.78%), Postives = 27/45 (60.00%), Query Frame = 2
Query:  767 YDESKRILIRWTPS*EGFHLHLISSAVAGTMNTLITAPVDMVKTR 901
            YD  K  L++     +    H +S+ VAG   T++++PVD+VKTR
Sbjct:  197 YDLMKEALVKNHLLADDLPCHFLSALVAGFCTTVLSSPVDVVKTR 241          
BLAST of DY305749 vs. ExPASy Swiss-Prot
Match: UCP1_HUMAN (Mitochondrial brown fat uncoupling protein 1 OS=Homo sapiens GN=UCP1 PE=2 SV=3)

HSP 1 Score: 69.3218 bits (168), Expect = 4.551e-15
Identity = 51/162 (31.48%), Postives = 77/162 (47.53%), Query Frame = 3
Query:  264 TSGLAVAVATAVTHPLDVLKVRLQMQ-------FVGQKGPLNGMGRLFLQILKKEGPKSLYLGLTPALTRSILYGGLRLGLYEP-SKYACDWAFGSTNILVKIXXXXXXXXXXXXLTNPTEVLKVRLQMNSSM-----KQSGSIAEMRRLISEEGIRALWKG 710
            ++G+A  +A  +T PLD  KVRLQ+Q        +  KG L  +      ++K EG   LY GL   L R I    LR+GLY+   ++       + ++  KI            +  PTEV+KVRLQ  S +     + +G+    R + + EG+  LWKG
Sbjct:   19 SAGIAACLADVITFPLDTAKVRLQVQGECPTSSVIRYKGVLGTI----TAVVKTEGRMKLYSGLPAGLQRQISSASLRIGLYDTVQEFLTAGKETAPSLGSKILAGLTTGGVAVFIGQPTEVVKVRLQAQSHLHGIKPRYTGTYNAYRIIATTEGLTGLWKG 176          

HSP 2 Score: 32.7278 bits (73), Expect = 4.551e-15
Identity = 16/45 (35.56%), Postives = 26/45 (57.78%), Query Frame = 2
Query:  767 YDESKRILIRWTPS*EGFHLHLISSAVAGTMNTLITAPVDMVKTR 901
            YD  K   ++     +    HL+S+ +AG   T +++PVD+VKTR
Sbjct:  195 YDLMKEAFVKNNILADDVPCHLVSALIAGFCATAMSSPVDVVKTR 239          
BLAST of DY305749 vs. ExPASy Swiss-Prot
Match: UCP1_MESAU (Mitochondrial brown fat uncoupling protein 1 OS=Mesocricetus auratus GN=UCP1 PE=1 SV=3)

HSP 1 Score: 67.781 bits (164), Expect = 1.686e-14
Identity = 49/158 (31.01%), Postives = 72/158 (45.57%), Query Frame = 3
Query:  264 TSGLAVAVATAVTHPLDVLKVRLQMQFVGQKGP---LNGMGRLFLQILKKEGPKSLYLGLTPALTRSILYGGLRLGLYEP-SKYACDWAFGSTNILVKIXXXXXXXXXXXXLTNPTEVLKVRLQMNSSM-----KQSGSIAEMRRLISEEGIRALWKG 710
            ++G+A  +A  +T PLD  KVRLQ+Q  GQ        G+      + K EG   LY GL   + R I +  LR+GLY+   +Y          +  +I            +  PTEV+KVRLQ  S +     + +G+    R + + E    LWKG
Sbjct:   19 SAGVAACLADIITFPLDTAKVRLQIQGEGQISSTIRYKGVLGTITTLAKTEGLPKLYSGLPAGIQRQISFASLRIGLYDTVQEYFSSGKETPPTLGNRISAGLMTGGVAVFIGQPTEVVKVRLQAQSHLHGIKPRYTGTYNAYRIIATTESFSTLWKG 176          

HSP 2 Score: 32.3426 bits (72), Expect = 1.686e-14
Identity = 20/69 (28.99%), Postives = 30/69 (43.48%), Query Frame = 2
Query:  695 SSMERGVGPXXXXXXXXXXXXXXXYDESKRILIRWTPS*EGFHLHLISSAVAGTMNTLITAPVDMVKTR 901
            S++ +G  P               YD  K  L+      +    HL+S+ VAG   T + +P D+VKTR
Sbjct:  171 STLWKGTTPNLLRNVIINCVELVTYDLMKGALVNNQILADDVPCHLLSAFVAGFCTTFLASPADVVKTR 239          
BLAST of DY305749 vs. ExPASy Swiss-Prot
Match: UCP1_DICGR (Mitochondrial brown fat uncoupling protein 1 OS=Dicrostonyx groenlandicus GN=UCP1 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 1.686e-14
Identity = 48/158 (30.38%), Postives = 72/158 (45.57%), Query Frame = 3
Query:  264 TSGLAVAVATAVTHPLDVLKVRLQMQFVGQKGP---LNGMGRLFLQILKKEGPKSLYLGLTPALTRSILYGGLRLGLYEP-SKYACDWAFGSTNILVKIXXXXXXXXXXXXLTNPTEVLKVRLQMNSSM-----KQSGSIAEMRRLISEEGIRALWKG 710
            ++G++  +A  +T PLD  KVRLQ+Q  GQ        G+      + K EG   LY GL   + R I +  LR+GLY+   +Y          +  +I            +  PTEV+KVRLQ  S +     + +G+    R + + E    LWKG
Sbjct:   19 SAGISACLADIITFPLDTAKVRLQIQGEGQTSSTIRYKGVLGTITTLAKTEGWPKLYSGLPAGIQRQISFASLRIGLYDTVQEYFSSGKETPPTLGNRISAGLMTGGVAVFIGQPTEVVKVRLQAQSHLHGIKPRYTGTYNAYRIIATTESFSTLWKG 176          

HSP 2 Score: 32.7278 bits (73), Expect = 1.686e-14
Identity = 20/69 (28.99%), Postives = 30/69 (43.48%), Query Frame = 2
Query:  695 SSMERGVGPXXXXXXXXXXXXXXXYDESKRILIRWTPS*EGFHLHLISSAVAGTMNTLITAPVDMVKTR 901
            S++ +G  P               YD  K  L+      +    HL+S+ VAG   T + +P D+VKTR
Sbjct:  171 STLWKGTTPNLMRNVIINRTELVTYDLMKGALVNNQILADDVPCHLLSALVAGFCTTFLASPADVVKTR 239          
BLAST of DY305749 vs. ExPASy Swiss-Prot
Match: DIC_MOUSE (Mitochondrial dicarboxylate carrier OS=Mus musculus GN=Slc25a10 PE=2 SV=2)

HSP 1 Score: 57.3806 bits (137), Expect = 1.167e-11
Identity = 47/159 (29.56%), Postives = 76/159 (47.80%), Query Frame = 3
Query:  255 HFGTSGLAVAVATAVTHPLDVLKVRLQMQFVGQKGPLNGMGRLFLQILKKEGPKSLYLGLTPALTRSILYGGLRLGLYEPSK-YACDWAFGSTNILVKIXXXXXXXXXXXXLTNPTEVLKVRLQMNSSM------KQSGSIAEMRRLISEEGIRALWKG 710
            +FG  GLA   A   THPLD+LKV LQ Q   Q+  L   G + LQ+++ +G  +LY GL+ +L R + Y   R  +YE  + Y    + G      K+            +  P +++ VR+Q +  +        S ++  + R+  EE +R L+ G
Sbjct:   10 YFG--GLASCGAACCTHPLDLLKVHLQTQ---QEVKLRMTG-MALQVVRTDGFLALYNGLSASLCRQMTYSLTRFAIYETMRDYMTKDSQGPLPFYNKVLLGGISGLTGGFVGTPADLVNVRMQNDMKLPPSQRRNYSHALDGLYRVAREESLRKLFSG 162          

HSP 2 Score: 33.113 bits (74), Expect = 1.167e-11
Identity = 14/45 (31.11%), Postives = 27/45 (60.00%), Query Frame = 2
Query:  767 YDESKRILIRWTPS*EGFHLHLISSAVAGTMNTLITAPVDMVKTR 901
            YD++K++++      +    H +SS +AG   T +  P+D++KTR
Sbjct:  181 YDQAKQLVLSTGYLSDNIFTHFVSSFIAGGCATFLCQPLDVLKTR 225          
BLAST of DY305749 vs. ExPASy Swiss-Prot
Match: SCMC3_HUMAN (Calcium-binding mitochondrial carrier protein SCaMC-3 OS=Homo sapiens GN=SLC25A23 PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 1.879e-11
Identity = 49/165 (29.70%), Postives = 82/165 (49.70%), Query Frame = 3
Query:  243 HIVHHFGTSGLAVAVATAVTHPLDVLKVRLQMQFVGQKGPLNGMGRLFLQILKKEGPKSLYLGLTPALTRSILYGGLRLGLYEPSK------YACDWAFGSTNILVKIXXXXXXXXXXXXLTNPTEVLKVRLQMNSSMK---QSGSIAEMRRLISEEGIRALWKG 710
            H+   F    LA A A  + +P++VLK RL ++  GQ   L    R   +IL++EGP++ Y G  P +   I Y G+ L +YE  K      Y+ D A     ILV +             + P  +++ R+Q  +S++   Q   +  +R ++S+EG+R L++G
Sbjct:  278 HVQERFVAGSLAGATAQTIIYPMEVLKTRLTLRRTGQYKGLLDCAR---RILEREGPRAFYRGYLPNVLGIIPYAGIDLAVYETLKNWWLQQYSHDSA--DPGILVLLACGTISSTCGQIASYPLALVRTRMQAQASIEGGPQLSMLGLLRHILSQEGMRGLYRG 437          
BLAST of DY305749 vs. ExPASy Swiss-Prot
Match: TPC_MOUSE (Mitochondrial thiamine pyrophosphate carrier OS=Mus musculus GN=Slc25a19 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 4.185e-11
Identity = 48/166 (28.92%), Postives = 68/166 (40.96%), Query Frame = 3
Query:  255 HFGTSGLAVAVATAVTHPLDVLKVRLQMQFVGQKGPLNGMGRLFLQILKKEGPKSLYLGLTPALTRSILYGGLRLGLYEPSKYACDWAF----GSTNILVKIXXXXXXXXXXXXLTNPTEVLKVRLQMNSSMKQSGSIAEMR----------RLISEEGIRALWKG 710
            HF   GL+   AT   HP+DVL+ RL  Q  G+    N +      + K EGP   Y GLTP +     Y GL+   Y   K A DW        T  L  +             T P +++K RLQ+        +  ++R          +++ EEG R  +KG
Sbjct:  121 HFVCGGLSAGTATLTVHPVDVLRTRLAAQ--GEPKIYNNLREAIRTMYKTEGPFVFYKGLTPTVIAIFPYAGLQFSCYRSLKRAYDWLIPPDGKQTGNLKNLLCGCGSGVISKTFTYPLDLIKKRLQVGGFEHARSAFGQVRSYRGLLDLTQQVLQEEGTRGFFKG 284          
BLAST of DY305749 vs. ExPASy Swiss-Prot
Match: DIC_HUMAN (Mitochondrial dicarboxylate carrier OS=Homo sapiens GN=SLC25A10 PE=1 SV=2)

HSP 1 Score: 56.6102 bits (135), Expect = 4.303e-11
Identity = 46/159 (28.93%), Postives = 77/159 (48.43%), Query Frame = 3
Query:  255 HFGTSGLAVAVATAVTHPLDVLKVRLQMQFVGQKGPLNGMGRLFLQILKKEGPKSLYLGLTPALTRSILYGGLRLGLYEPSK-YACDWAFGSTNILVKIXXXXXXXXXXXXLTNPTEVLKVRLQMNSSMKQ------SGSIAEMRRLISEEGIRALWKG 710
            +FG  GLA   A   THPLD+LKV LQ Q   Q+  L   G + L++++ +G  +LY GL+ +L R + Y   R  +YE  +      + G      K+            +  P +++ VR+Q +  + Q      + ++  + R+  EEG+R L+ G
Sbjct:   11 YFG--GLASCGAACCTHPLDLLKVHLQTQ---QEVKLRMTG-MALRVVRTDGILALYSGLSASLCRQMTYSLTRFAIYETVRDRVAKGSQGPLPFHEKVLLGSVSGLAGGFVGTPADLVNVRMQNDVKLPQGQRRNYAHALDGLYRVAREEGLRRLFSG 163          

HSP 2 Score: 31.9574 bits (71), Expect = 4.303e-11
Identity = 13/45 (28.89%), Postives = 27/45 (60.00%), Query Frame = 2
Query:  767 YDESKRILIRWTPS*EGFHLHLISSAVAGTMNTLITAPVDMVKTR 901
            YD++K++++      +    H ++S +AG   T +  P+D++KTR
Sbjct:  182 YDQAKQLVLSTGYLSDNIFTHFVASFIAGGCATFLCQPLDVLKTR 226          
The following BLAST results are available for this feature:
BLAST of DY305749 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
UCP1_MOUSE5.591e-1630.38Mitochondrial brown fat uncoupling protein 1 OS=Mu... [more]
UCP1_PHOSU1.228e-1531.01Mitochondrial brown fat uncoupling protein 1 OS=Ph... [more]
UCP1_CANFA1.595e-1530.23Mitochondrial brown fat uncoupling protein 1 OS=Ca... [more]
UCP1_HUMAN4.551e-1531.48Mitochondrial brown fat uncoupling protein 1 OS=Ho... [more]
UCP1_MESAU1.686e-1431.01Mitochondrial brown fat uncoupling protein 1 OS=Me... [more]
UCP1_DICGR1.686e-1430.38Mitochondrial brown fat uncoupling protein 1 OS=Di... [more]
DIC_MOUSE1.167e-1129.56Mitochondrial dicarboxylate carrier OS=Mus musculu... [more]
SCMC3_HUMAN1.879e-1129.70Calcium-binding mitochondrial carrier protein SCaM... [more]
TPC_MOUSE4.185e-1128.92Mitochondrial thiamine pyrophosphate carrier OS=Mu... [more]
DIC_HUMAN4.303e-1128.93Mitochondrial dicarboxylate carrier OS=Homo sapien... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM2AG02RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305749 ID=DY305749; Name=DY305749; organism=Citrus sinensis; type=EST; length=1275bp
GCAGAAAACTAATATAGGAAATGCACAAGCTATCACCTGCGATTCTTTGC
AACTGAAATCGGGTATGACGTGTCTTATGTGCGGCTATTTTCCCTCCTCC
TAACGCCCAATCTTTTCTCCGACAGTAAATTGCCCGAACTAATCAAAACA
TGAGCGTGAATTCTTCGGCTCCGCTTTCAGGACCAGTGGCTGTTGAAGTA
AAAGTTGGTGAGAAGCAGAAGAATTGGTCGACGACGCCATCCCATATTGT
TCATCACTTTGGTACCAGCGGACTGGCTGTTGCAGTTGCCACTGCTGTCA
CTCATCCTCTAGATGTACTCAAAGTCAGGCTGCAAATGCAATTTGTTGGT
CAGAAAGGTCCCTTGAATGGAATGGGACGATTATTTCTCCAAATATTGAA
AAAAGAAGGTCCAAAGTCTTTGTATCTGGGATTGACTCCTGCTCTGACAA
GGTCAATTTTGTATGGTGGTCTACGTTTAGGCTTGTATGAGCCCTCAAAG
TATGCATGTGATTGGGCATTCGGGTCCACCAATATCTTGGTTAAAATTGC
ATCTGGAGCATTTGCTGGTGCCACTGCTACTGCACTTACCAATCCAACTG
AAGTCCTGAAGGTGCGGCTGCAGATGAATTCCAGCATGAAACAAAGTGGA
TCGATTGCAGAAATGCGAAGACTTATTTCTGAGGAAGGAATAAGAGCTCT
ATGGAAAGGGGGGTTGGTCCTGCTATGGCAAGAGCTGCTGCTTTAACTGC
CTCACAGCTAGCAACATATGATGAATCCAAGCGGATATTGATCAGGTGGA
CGCCCTCTTGAGAAGGATTTCATTTACATCTCATCTCAAGTGCAGTCGCT
GGCACCATGAATACCCTCATAACTGCACCTGTTGACATGGTTAAAACCCG
GTCTAATGTTGCAACCAAAATTCTAAAAAAATTTGGAAGCTAATAAAAAT
GGATTTCATTGGGCATAACCAGGTTTGGGGTGAAAAGAAAGGCCCCCCCG
CCCTTTTATAAAAGGGGCCTTTTCCATTTTTTTTGCAAAATTGGGGTCCC
CAAAAGTAAAATTTAACCTTTATCCTTTTTGGGAAAAACCTAAAGGGAAC
CCTTGACGGGAATAAAATTGCAAACTCTTATTTTGGGGGGGGCTGTTCTC
TATATTTAAAATTTTTTTCAAAAAATTTTGTAACACCAAAAAATAATTTT
TTTTTGTTTTTAAAAAAAACCCCCAAAGAGGGGGAGTTTTTTCCCCCTCC
TCCACCCCCCCCCCCCCCCCCCCCC
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