DY305744

Overview
NameDY305744
Unique NameDY305744
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1276
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305744 vs. ExPASy Swiss-Prot
Match: CLPP_SOYBN (ATP-dependent Clp protease proteolytic subunit OS=Glycine max GN=clpP PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 9.268e-43
Identity = 85/99 (85.86%), Postives = 91/99 (91.92%), Query Frame = 2
Query:  425 LINRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 721
            + NRLYRERLLFLGQ V+S+ISNQLI +MVYLSIE E KDLYLFINSPGGWVIPGIAIYDTMQFV+PDVQT+CMGLAASMGSFLLA G  TKRLAFPHA
Sbjct:   23 IYNRLYRERLLFLGQEVDSEISNQLISLMVYLSIEEENKDLYLFINSPGGWVIPGIAIYDTMQFVQPDVQTVCMGLAASMGSFLLAGGEITKRLAFPHA 121          
BLAST of DY305744 vs. ExPASy Swiss-Prot
Match: CLPP_PANGI (ATP-dependent Clp protease proteolytic subunit OS=Panax ginseng GN=clpP PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 9.268e-43
Identity = 85/103 (82.52%), Postives = 93/103 (90.29%), Query Frame = 2
Query:  413 YCFILINRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 721
            Y   + NRLYRERLLFLGQ V S+ISNQLIG+MVYLSIE++TKDLYLF+NSPGGWV+PGIAIYDTMQFVRPDV TICMGLAASMGSF+LA G  TKRLAFPHA
Sbjct:   19 YWVDIYNRLYRERLLFLGQPVASEISNQLIGLMVYLSIEDDTKDLYLFMNSPGGWVLPGIAIYDTMQFVRPDVHTICMGLAASMGSFILAGGEITKRLAFPHA 121          
BLAST of DY305744 vs. ExPASy Swiss-Prot
Match: CLPP_MORIN (ATP-dependent Clp protease proteolytic subunit OS=Morus indica GN=clpP PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 1.581e-42
Identity = 83/99 (83.84%), Postives = 93/99 (93.94%), Query Frame = 2
Query:  425 LINRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 721
            +INRLYRERLLFLGQ V+S+ISNQLIG+MV+LSIE++TKDLYLFINSPGGWVIPG+ IYDTMQFV+PDVQTICMGLAASMGSF+L  G  TKRLAFPHA
Sbjct:   23 VINRLYRERLLFLGQEVDSEISNQLIGLMVFLSIEDDTKDLYLFINSPGGWVIPGLGIYDTMQFVQPDVQTICMGLAASMGSFILVGGEITKRLAFPHA 121          
BLAST of DY305744 vs. ExPASy Swiss-Prot
Match: CLPP_LOTJA (ATP-dependent Clp protease proteolytic subunit OS=Lotus japonicus GN=clpP PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 1.581e-42
Identity = 84/99 (84.85%), Postives = 92/99 (92.93%), Query Frame = 2
Query:  425 LINRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 721
            + NRLYRERLLFLGQ V S+ISNQLIG+MVYLSIE++ KDLYLFINSPGGWVIPGIAIYDTMQFV+PDVQT+CMGLAASMGSF+LA G  TKRLAFPHA
Sbjct:   23 IYNRLYRERLLFLGQEVNSEISNQLIGLMVYLSIEDDKKDLYLFINSPGGWVIPGIAIYDTMQFVQPDVQTVCMGLAASMGSFVLAGGKITKRLAFPHA 121          
BLAST of DY305744 vs. ExPASy Swiss-Prot
Match: CLPP_NANDO (ATP-dependent Clp protease proteolytic subunit OS=Nandina domestica GN=clpP PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 2.065e-42
Identity = 84/97 (86.60%), Postives = 90/97 (92.78%), Query Frame = 2
Query:  431 NRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 721
            NRLYRERLLFLGQ V+S+ISNQLIG+MVYLSIE+ETKDLYLFINSPGGWVIPG+AIYDTMQFV PDV TICMGLAASMGSF+L  G  TKRLAFPHA
Sbjct:   25 NRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDETKDLYLFINSPGGWVIPGVAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPHA 121          
BLAST of DY305744 vs. ExPASy Swiss-Prot
Match: CLPP_EPIVI (ATP-dependent Clp protease proteolytic subunit OS=Epifagus virginiana GN=clpP PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 2.065e-42
Identity = 83/97 (85.57%), Postives = 91/97 (93.81%), Query Frame = 2
Query:  431 NRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 721
            NRLYRERLLFLGQ V+SDISNQLIG+MVYLSIE++TK++YLFINSPGGWVIPG+AIYDTMQFVRP+V TICMGLAASMGSFLL  G  TKRLAFPHA
Sbjct:   25 NRLYRERLLFLGQEVDSDISNQLIGLMVYLSIEDDTKEIYLFINSPGGWVIPGVAIYDTMQFVRPEVHTICMGLAASMGSFLLVGGEITKRLAFPHA 121          
BLAST of DY305744 vs. ExPASy Swiss-Prot
Match: CLPP_POPTR (ATP-dependent Clp protease proteolytic subunit OS=Populus trichocarpa GN=clpP PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 2.697e-42
Identity = 83/97 (85.57%), Postives = 90/97 (92.78%), Query Frame = 2
Query:  431 NRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 721
            NRLYRERLLFLGQ ++S+ISNQLIG+MVYLS E+E KDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQT+CMGLAASMGSF+L  G  TKRLAFPHA
Sbjct:   25 NRLYRERLLFLGQDIDSEISNQLIGLMVYLSTESEIKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTVCMGLAASMGSFILVGGKITKRLAFPHA 121          
BLAST of DY305744 vs. ExPASy Swiss-Prot
Match: CLPP_POPAL (ATP-dependent Clp protease proteolytic subunit OS=Populus alba GN=clpP PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 2.697e-42
Identity = 83/97 (85.57%), Postives = 90/97 (92.78%), Query Frame = 2
Query:  431 NRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 721
            NRLYRERLLFLGQ ++S+ISNQLIG+MVYLS E+E KDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQT+CMGLAASMGSF+L  G  TKRLAFPHA
Sbjct:   25 NRLYRERLLFLGQDIDSEISNQLIGLMVYLSTESEIKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTVCMGLAASMGSFILVGGKITKRLAFPHA 121          
BLAST of DY305744 vs. ExPASy Swiss-Prot
Match: CLPP_EUCGG (ATP-dependent Clp protease proteolytic subunit OS=Eucalyptus globulus subsp. globulus GN=clpP PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 2.697e-42
Identity = 83/97 (85.57%), Postives = 90/97 (92.78%), Query Frame = 2
Query:  431 NRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 721
            NRLYRERLLFLGQ V+S+ISNQLIG+MVYLSIEN+ KDLYLFINSPGGWVIPG+AIYDTMQFV+PDV TICMGLAASMGSF+L  G  TKRLAFPHA
Sbjct:   25 NRLYRERLLFLGQEVDSEISNQLIGLMVYLSIENDNKDLYLFINSPGGWVIPGVAIYDTMQFVQPDVHTICMGLAASMGSFVLVGGEITKRLAFPHA 121          
BLAST of DY305744 vs. ExPASy Swiss-Prot
Match: CLPP_ATRBE (ATP-dependent Clp protease proteolytic subunit OS=Atropa belladonna GN=clpP PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 2.697e-42
Identity = 83/97 (85.57%), Postives = 90/97 (92.78%), Query Frame = 2
Query:  431 NRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 721
            NRLYRERLLFLGQ + S+ISNQLIG+MVYLSIE+ETK+LYLFINSPGGWVIPGIAIYDTMQFVRPDV T+CMGLAASMGSF+L  G  TKRLAFPHA
Sbjct:   25 NRLYRERLLFLGQGINSEISNQLIGLMVYLSIEDETKELYLFINSPGGWVIPGIAIYDTMQFVRPDVHTVCMGLAASMGSFILVGGEITKRLAFPHA 121          
The following BLAST results are available for this feature:
BLAST of DY305744 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPP_SOYBN9.268e-4385.86ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_PANGI9.268e-4382.52ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_MORIN1.581e-4283.84ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_LOTJA1.581e-4284.85ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_NANDO2.065e-4286.60ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_EPIVI2.065e-4285.57ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_POPTR2.697e-4285.57ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_POPAL2.697e-4285.57ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_EUCGG2.697e-4285.57ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_ATRBE2.697e-4285.57ATP-dependent Clp protease proteolytic subunit OS=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM2AF08RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305744 ID=DY305744; Name=DY305744; organism=Citrus sinensis; type=EST; length=1276bp
GATAGCAAAAAAGAGACGTGGTATTGGGGTCATTTGTCTTATATGTGCAA
ATCAAAATCGGGCGAATCCTTACTCGGAGTAGAGCCTAAACCTAAAAAAA
TGGAAGAAGCCCATTCAATTCAGGAACAAGAAAATGGCATCGTGATTTTT
GGATCGGATCTCGATGAAAAAATACATCAATGAAAAGTTAGTTCGATAAG
TCGATAAGTTTAGTGAATTTCTTTTTTATATTAGAATATTATAGGTCTAG
GAAACCGGCTAAACTCAGCGTTCTTGAAAACCGGAAGAAAAGCCCCTCGA
TAGAAGCGAGGAAAAAAGAAAGGAAAGGGGCTAGGAGCTACACATTGATT
TGTTTTTCGCAAGTTTTGTTGAACCGTATGCATCAAAAGATGCCTGTACG
GCTCCGAAAGGATACTGTTTTATCCTAATCAACCGACTTTATCGAGAAAG
ATTACTTTTTTTAGGTCAAATGGTTGAGAGCGATATCTCGAATCAACTTA
TTGGTATTATGGTATATCTCAGTATAGAGAACGAGACCAAGGATTTGTAT
TTATTTATTAACTCTCCTGGCGGATGGGTAATACCCGGGATAGCAATTTA
TGATACTATGCAATTTGTGCGACCCGATGTACAGACAATATGCATGGGAT
TGGCCGCCTCCATGGGGTCTTTTCTCCTGGCCGCCGGAGCAAGTACCAAA
CGTCTAGCATTCCCTCACGCTTGGCGCCAATGAGTTTTTTATTTGAGAGA
AAAAAGAAGACTATGCCTTCGCCATATGAATTCTTAATATTAAGTAATAA
TAGCATGGCACTTCGAATTCGATATGAAATTGTTAAGTGTTTTTTTTTTT
TCAAAATATTTGATTATGTATCGAAGCAATAGTATGAGATAAAGAAGGGG
GTATTCCGAGTTTATCTTTCCTTATCGGAGGGCCTATTGCAGCGGCCACA
CACCTTTTTTCCAGCCCAAAGAGGGTCTTAACAATTAAACATTAAACAAG
AATTTAAGGGTATGGAAAAAAATACAAAAAATAAAAAAAAAAAGAATTAA
TTTTTGAATTTATTTTCTTTTTTTTTTTTTTTGATTTTAAAAAAAAAAAA
AAAAAAAAACTCTAAGGGGGGGGGGCCGGGGACACCCCATTTTCCCCCCC
CTTAAAAGGGGATATTTAAATATAAAAAATTTTCCCGGGGGGCCCCCGCC
CTTTTTTTTTTAAACAACCCCCCCCGGTGGGGGGGCGGGGGGGGAAAAAA
AACCCCCCCCGGGGGGGTGTTGTTTT
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