DY305744

Overview
NameDY305744
Unique NameDY305744
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1276
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305744 vs. ExPASy Swiss-Prot
Match: CLPP_PIPCE (ATP-dependent Clp protease proteolytic subunit OS=Piper cenocladum GN=clpP PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 7.846e-42
Identity = 81/98 (82.65%), Postives = 90/98 (91.84%), Query Frame = 2
Query:  431 NRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHAW 724
            NRL+RERLLFLGQ V+S+ISNQ++G+MVYLSIE+ T+DLYLFINSPGGWVIPGIAIYDTMQFV PDV TICMGLAASMGSF+L  G  TKRLAFPHAW
Sbjct:   25 NRLHRERLLFLGQEVDSEISNQIVGLMVYLSIEDGTRDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPHAW 122          
BLAST of DY305744 vs. ExPASy Swiss-Prot
Match: CLPP_ILLOL (ATP-dependent Clp protease proteolytic subunit OS=Illicium oligandrum GN=clpP PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.025e-41
Identity = 83/97 (85.57%), Postives = 91/97 (93.81%), Query Frame = 2
Query:  431 NRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 721
            NRL+RERLLFLGQ V+S+ISNQL+G+MVYLSIE++T+DLYLFINSPGGWVIPGIAIYDTMQFV PDV TICMGLAASMGSFLLA G  TKRLAFPHA
Sbjct:   25 NRLHRERLLFLGQGVDSEISNQLVGLMVYLSIEDDTRDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFLLAGGEITKRLAFPHA 121          
BLAST of DY305744 vs. ExPASy Swiss-Prot
Match: CLPP_BUXMI (ATP-dependent Clp protease proteolytic subunit OS=Buxus microphylla GN=clpP PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.025e-41
Identity = 83/97 (85.57%), Postives = 90/97 (92.78%), Query Frame = 2
Query:  431 NRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 721
            NRL+RERLLFLGQ V+S+ISNQLIG+MVYLSIE++TKDLYLFINSPGGWVIPGIAIYDTMQFV PD+ TICMGLAASMGSFLL  G  TKRLAFPHA
Sbjct:   25 NRLHRERLLFLGQEVDSEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGIAIYDTMQFVPPDIHTICMGLAASMGSFLLVGGEITKRLAFPHA 121          
BLAST of DY305744 vs. ExPASy Swiss-Prot
Match: CLPP_LIRTU (ATP-dependent Clp protease proteolytic subunit OS=Liriodendron tulipifera GN=clpP PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 1.748e-41
Identity = 81/99 (81.82%), Postives = 91/99 (91.92%), Query Frame = 2
Query:  425 LINRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 721
            + NRLYRERLLFLGQ V+S+ISNQL+G+MVYLSIE++T+DLYLFINSPGGWVIPGI+IYDTMQFV PDV TICMGLAASMGSF+L  G  TKRLAFPHA
Sbjct:   23 VFNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDTRDLYLFINSPGGWVIPGISIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPHA 121          
BLAST of DY305744 vs. ExPASy Swiss-Prot
Match: CLPP_LACSA (ATP-dependent Clp protease proteolytic subunit OS=Lactuca sativa GN=clpP PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 1.748e-41
Identity = 80/99 (80.81%), Postives = 91/99 (91.92%), Query Frame = 2
Query:  425 LINRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 721
            + NRLYRERLLFLGQ V+S+ISNQLIG+M+YLSIE++TKDLYLFINSPGGWVIPG+A+YDTMQFV+PDV TICMG AASMGSF+L  G  TKRLAFPHA
Sbjct:   23 IYNRLYRERLLFLGQEVDSEISNQLIGLMIYLSIEDDTKDLYLFINSPGGWVIPGVALYDTMQFVQPDVHTICMGSAASMGSFILVGGEITKRLAFPHA 121          
BLAST of DY305744 vs. ExPASy Swiss-Prot
Match: CLPP_PLAOC (ATP-dependent Clp protease proteolytic subunit OS=Platanus occidentalis GN=clpP PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 2.981e-41
Identity = 82/97 (84.54%), Postives = 90/97 (92.78%), Query Frame = 2
Query:  431 NRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 721
            NRL+RERLLFLGQ V+S+ISNQLIG+MVYLSIE++T+DLYLFINSPGGWVIPGIAIYDTMQFV PDV TICMGLAASMGSF+L  G  TKRLAFPHA
Sbjct:   25 NRLHRERLLFLGQEVDSEISNQLIGLMVYLSIEDDTRDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPHA 121          
BLAST of DY305744 vs. ExPASy Swiss-Prot
Match: CLPP_CALFG (ATP-dependent Clp protease proteolytic subunit OS=Calycanthus floridus var. glaucus GN=clpP PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 2.981e-41
Identity = 81/97 (83.51%), Postives = 90/97 (92.78%), Query Frame = 2
Query:  431 NRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 721
            NRL+RERLLFLGQ V+S+ISNQL+G+MVYL+IE++TKDLYLFINSPGGWVIPGIAIYDTMQFV PDV TICMGLAASMGSF+L  G  TKRLAFPHA
Sbjct:   25 NRLHRERLLFLGQEVDSEISNQLVGLMVYLTIEDDTKDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPHA 121          
BLAST of DY305744 vs. ExPASy Swiss-Prot
Match: CLPP_DRIGR (ATP-dependent Clp protease proteolytic subunit OS=Drimys granadensis GN=clpP PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 3.894e-41
Identity = 81/97 (83.51%), Postives = 90/97 (92.78%), Query Frame = 2
Query:  431 NRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 721
            NRL+RERLLFLGQ V+S+ISNQL+G+MVYLSIE++T+DLYLFINSPGGWVIPGIAIYDTMQFV PDV TICMGLAASMGSF+L  G  TKRLAFPHA
Sbjct:   25 NRLHRERLLFLGQEVDSEISNQLVGLMVYLSIEDDTRDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPHA 121          
BLAST of DY305744 vs. ExPASy Swiss-Prot
Match: CLPP_HELAN (ATP-dependent Clp protease proteolytic subunit OS=Helianthus annuus GN=clpP PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 5.085e-41
Identity = 79/99 (79.80%), Postives = 91/99 (91.92%), Query Frame = 2
Query:  425 LINRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 721
            + NRLYRERLLFLGQ V+S+ISNQLIG+M+YLSIE++T+DLYLFINSPGGWVIPG+A+YDTMQFV+PDV TICMG AASMGSF+L  G  TKRLAFPHA
Sbjct:   23 IYNRLYRERLLFLGQEVDSEISNQLIGLMIYLSIEDDTQDLYLFINSPGGWVIPGVALYDTMQFVQPDVHTICMGSAASMGSFILVGGEITKRLAFPHA 121          
BLAST of DY305744 vs. ExPASy Swiss-Prot
Match: CLPP_PHAAO (ATP-dependent Clp protease proteolytic subunit OS=Phalaenopsis aphrodite subsp. formosana GN=clpP PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 6.642e-41
Identity = 80/97 (82.47%), Postives = 90/97 (92.78%), Query Frame = 2
Query:  431 NRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 721
            NRL+RERLLFLGQ V+S+ISNQ++G+MVYLSIE++T+DLYLFINSPGGWVIPGIAIYDTMQFV PDV TICMGLAASMGSF+L  G  TKRLAFPHA
Sbjct:   25 NRLHRERLLFLGQEVDSEISNQIVGLMVYLSIEDDTRDLYLFINSPGGWVIPGIAIYDTMQFVLPDVHTICMGLAASMGSFILVGGEITKRLAFPHA 121          
The following BLAST results are available for this feature:
BLAST of DY305744 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPP_PIPCE7.846e-4282.65ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_ILLOL1.025e-4185.57ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_BUXMI1.025e-4185.57ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_LIRTU1.748e-4181.82ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_LACSA1.748e-4180.81ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_PLAOC2.981e-4184.54ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_CALFG2.981e-4183.51ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_DRIGR3.894e-4183.51ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_HELAN5.085e-4179.80ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_PHAAO6.642e-4182.47ATP-dependent Clp protease proteolytic subunit OS=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM2AF08RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305744 ID=DY305744; Name=DY305744; organism=Citrus sinensis; type=EST; length=1276bp
GATAGCAAAAAAGAGACGTGGTATTGGGGTCATTTGTCTTATATGTGCAA
ATCAAAATCGGGCGAATCCTTACTCGGAGTAGAGCCTAAACCTAAAAAAA
TGGAAGAAGCCCATTCAATTCAGGAACAAGAAAATGGCATCGTGATTTTT
GGATCGGATCTCGATGAAAAAATACATCAATGAAAAGTTAGTTCGATAAG
TCGATAAGTTTAGTGAATTTCTTTTTTATATTAGAATATTATAGGTCTAG
GAAACCGGCTAAACTCAGCGTTCTTGAAAACCGGAAGAAAAGCCCCTCGA
TAGAAGCGAGGAAAAAAGAAAGGAAAGGGGCTAGGAGCTACACATTGATT
TGTTTTTCGCAAGTTTTGTTGAACCGTATGCATCAAAAGATGCCTGTACG
GCTCCGAAAGGATACTGTTTTATCCTAATCAACCGACTTTATCGAGAAAG
ATTACTTTTTTTAGGTCAAATGGTTGAGAGCGATATCTCGAATCAACTTA
TTGGTATTATGGTATATCTCAGTATAGAGAACGAGACCAAGGATTTGTAT
TTATTTATTAACTCTCCTGGCGGATGGGTAATACCCGGGATAGCAATTTA
TGATACTATGCAATTTGTGCGACCCGATGTACAGACAATATGCATGGGAT
TGGCCGCCTCCATGGGGTCTTTTCTCCTGGCCGCCGGAGCAAGTACCAAA
CGTCTAGCATTCCCTCACGCTTGGCGCCAATGAGTTTTTTATTTGAGAGA
AAAAAGAAGACTATGCCTTCGCCATATGAATTCTTAATATTAAGTAATAA
TAGCATGGCACTTCGAATTCGATATGAAATTGTTAAGTGTTTTTTTTTTT
TCAAAATATTTGATTATGTATCGAAGCAATAGTATGAGATAAAGAAGGGG
GTATTCCGAGTTTATCTTTCCTTATCGGAGGGCCTATTGCAGCGGCCACA
CACCTTTTTTCCAGCCCAAAGAGGGTCTTAACAATTAAACATTAAACAAG
AATTTAAGGGTATGGAAAAAAATACAAAAAATAAAAAAAAAAAGAATTAA
TTTTTGAATTTATTTTCTTTTTTTTTTTTTTTGATTTTAAAAAAAAAAAA
AAAAAAAAACTCTAAGGGGGGGGGGCCGGGGACACCCCATTTTCCCCCCC
CTTAAAAGGGGATATTTAAATATAAAAAATTTTCCCGGGGGGCCCCCGCC
CTTTTTTTTTTAAACAACCCCCCCCGGTGGGGGGGCGGGGGGGGAAAAAA
AACCCCCCCCGGGGGGGTGTTGTTTT
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