DY305744

Overview
NameDY305744
Unique NameDY305744
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1276
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY305744 vs. ExPASy Swiss-Prot
Match: CLPP_OLIPU (ATP-dependent Clp protease proteolytic subunit OS=Olimarabidopsis pumila GN=clpP PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 7.343e-40
Identity = 78/99 (78.79%), Postives = 89/99 (89.90%), Query Frame = 2 
Query:  425 LINRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 721
            + NRLYRERL FLGQ V+++ISNQLI +M+YLSIE +TKDLYLFINSPGGWVI G+AIYDTMQFVRPDVQTICMGLAAS+ SF+L  GA TKR+AFPHA
Sbjct:   23 IYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDTKDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGAITKRIAFPHA 121
[Close]
BLAST of DY305744 vs. ExPASy Swiss-Prot
Match: CLPP_DRANE (ATP-dependent Clp protease proteolytic subunit OS=Draba nemorosa GN=clpP PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 7.343e-40
Identity = 78/99 (78.79%), Postives = 89/99 (89.90%), Query Frame = 2 
Query:  425 LINRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 721
            + NRLYRERL FLGQ V+++ISNQLI +M+YLSIE +TKDLYLFINSPGGWVI G+AIYDTMQFVRPDVQTICMGLAAS+ SF+L  GA TKR+AFPHA
Sbjct:   23 IYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDTKDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGAITKRIAFPHA 121
[Close]
BLAST of DY305744 vs. ExPASy Swiss-Prot
Match: CLPP_CRUWA (ATP-dependent Clp protease proteolytic subunit OS=Crucihimalaya wallichii GN=clpP PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 7.343e-40
Identity = 78/99 (78.79%), Postives = 89/99 (89.90%), Query Frame = 2 
Query:  425 LINRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 721
            + NRLYRERL FLGQ V+++ISNQLI +M+YLSIE +TKDLYLFINSPGGWVI G+AIYDTMQFVRPDVQTICMGLAAS+ SF+L  GA TKR+AFPHA
Sbjct:   23 IYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDTKDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGAITKRIAFPHA 121
[Close]
BLAST of DY305744 vs. ExPASy Swiss-Prot
Match: CLPP_BARVE (ATP-dependent Clp protease proteolytic subunit OS=Barbarea verna GN=clpP PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 7.343e-40
Identity = 78/99 (78.79%), Postives = 89/99 (89.90%), Query Frame = 2 
Query:  425 LINRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 721
            + NRLYRERL FLGQ V+++ISNQLI +M+YLSIE +TKDLYLFINSPGGWVI G+AIYDTMQFVRPDVQTICMGLAAS+ SF+L  GA TKR+AFPHA
Sbjct:   23 IYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDTKDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGAITKRIAFPHA 121
[Close]
BLAST of DY305744 vs. ExPASy Swiss-Prot
Match: CLPP1_ARATH (ATP-dependent Clp protease proteolytic subunit 1 OS=Arabidopsis thaliana GN=clpP1 PE=1 SV=2)

HSP 1 Score: 165.236 bits (417), Expect = 7.343e-40
Identity = 78/99 (78.79%), Postives = 89/99 (89.90%), Query Frame = 2 
Query:  425 LINRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 721
            + NRLYRERL FLGQ V+++ISNQLI +M+YLSIE +TKDLYLFINSPGGWVI G+AIYDTMQFVRPDVQTICMGLAAS+ SF+L  GA TKR+AFPHA
Sbjct:   23 IYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDTKDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGAITKRIAFPHA 121
[Close]
BLAST of DY305744 vs. ExPASy Swiss-Prot
Match: CLPP_NASOF (ATP-dependent Clp protease proteolytic subunit OS=Nasturtium officinale GN=clpP PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 9.591e-40
Identity = 77/99 (77.78%), Postives = 89/99 (89.90%), Query Frame = 2 
Query:  425 LINRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 721
            + NRLYRERL FLGQ V+++ISNQLI +M+YLSIE +TKDLYLFINSPGGWVI G+A+YDTMQFVRPDVQTICMGLAAS+ SF+L  GA TKR+AFPHA
Sbjct:   23 IYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDTKDLYLFINSPGGWVISGMAVYDTMQFVRPDVQTICMGLAASIASFILVGGAITKRIAFPHA 121
[Close]
BLAST of DY305744 vs. ExPASy Swiss-Prot
Match: CLPP_LEPVR (ATP-dependent Clp protease proteolytic subunit OS=Lepidium virginicum GN=clpP PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 9.591e-40
Identity = 78/99 (78.79%), Postives = 89/99 (89.90%), Query Frame = 2 
Query:  425 LINRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 721
            + NRLYRERL FLGQ V+++ISNQLI +M+YLSIE +TKDLYLFINSPGGWVI G+AIYDTMQFVRPDVQTICMGLAAS+ SF+L  GA TKR+AFPHA
Sbjct:   23 IYNRLYRERLFFLGQDVDTEISNQLISLMIYLSIEKDTKDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGAITKRIAFPHA 121
[Close]
BLAST of DY305744 vs. ExPASy Swiss-Prot
Match: CLPP_NYMAL (ATP-dependent Clp protease proteolytic subunit OS=Nymphaea alba GN=clpP PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 2.790e-39
Identity = 78/99 (78.79%), Postives = 88/99 (88.89%), Query Frame = 2 
Query:  425 LINRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 721
            + NRL+RERLLFLGQ V+S+ISNQL+G+MVYLS+E+ T+DLYLFINSPGGWVIPGIAIYD MQ V PDV TICMGLAASMGSF+L  G  TKRLAFPHA
Sbjct:   23 IYNRLHRERLLFLGQGVDSEISNQLVGLMVYLSMEDNTRDLYLFINSPGGWVIPGIAIYDAMQIVPPDVHTICMGLAASMGSFILVGGEFTKRLAFPHA 121
[Close]
BLAST of DY305744 vs. ExPASy Swiss-Prot
Match: CLPP_NUPAD (ATP-dependent Clp protease proteolytic subunit OS=Nuphar advena GN=clpP PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 2.790e-39
Identity = 78/99 (78.79%), Postives = 88/99 (88.89%), Query Frame = 2 
Query:  425 LINRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 721
            + NRL+RERLLFLGQ V+S+ISNQL+G+MVYLS+E+ T+DLYLFINSPGGWVIPGIAIYD MQ V PDV TICMGLAASMGSF+L  G  TKRLAFPHA
Sbjct:   23 IYNRLHRERLLFLGQGVDSEISNQLVGLMVYLSMEDNTRDLYLFINSPGGWVIPGIAIYDAMQIVPPDVHTICMGLAASMGSFILVGGEFTKRLAFPHA 121
[Close]
BLAST of DY305744 vs. ExPASy Swiss-Prot
Match: CLPP_LOBMA (ATP-dependent Clp protease proteolytic subunit OS=Lobularia maritima GN=clpP PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 2.790e-39
Identity = 77/99 (77.78%), Postives = 88/99 (88.89%), Query Frame = 2 
Query:  425 LINRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 721
            + NRLYRERL FLGQ V+++ISNQLI +M+YLSIE +TKDLYLFINSPGGWVI G+AIYDTMQFVRPDVQTICMGLAAS+ SF+L  G  TKR+AFPHA
Sbjct:   23 IYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDTKDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGEITKRIAFPHA 121
The following BLAST results are available for this feature:
BLAST of DY305744 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPP_OLIPU7.343e-4078.79ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_DRANE7.343e-4078.79ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_CRUWA7.343e-4078.79ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_BARVE7.343e-4078.79ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP1_ARATH7.343e-4078.79ATP-dependent Clp protease proteolytic subunit 1 O... [more]
CLPP_NASOF9.591e-4077.78ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_LEPVR9.591e-4078.79ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_NYMAL2.790e-3978.79ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_NUPAD2.790e-3978.79ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_LOBMA2.790e-3977.78ATP-dependent Clp protease proteolytic subunit OS=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM2AF08RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305744 ID=DY305744; Name=DY305744; organism=Citrus sinensis; type=EST; length=1276bp
GATAGCAAAAAAGAGACGTGGTATTGGGGTCATTTGTCTTATATGTGCAA
ATCAAAATCGGGCGAATCCTTACTCGGAGTAGAGCCTAAACCTAAAAAAA
TGGAAGAAGCCCATTCAATTCAGGAACAAGAAAATGGCATCGTGATTTTT
GGATCGGATCTCGATGAAAAAATACATCAATGAAAAGTTAGTTCGATAAG
TCGATAAGTTTAGTGAATTTCTTTTTTATATTAGAATATTATAGGTCTAG
GAAACCGGCTAAACTCAGCGTTCTTGAAAACCGGAAGAAAAGCCCCTCGA
TAGAAGCGAGGAAAAAAGAAAGGAAAGGGGCTAGGAGCTACACATTGATT
TGTTTTTCGCAAGTTTTGTTGAACCGTATGCATCAAAAGATGCCTGTACG
GCTCCGAAAGGATACTGTTTTATCCTAATCAACCGACTTTATCGAGAAAG
ATTACTTTTTTTAGGTCAAATGGTTGAGAGCGATATCTCGAATCAACTTA
TTGGTATTATGGTATATCTCAGTATAGAGAACGAGACCAAGGATTTGTAT
TTATTTATTAACTCTCCTGGCGGATGGGTAATACCCGGGATAGCAATTTA
TGATACTATGCAATTTGTGCGACCCGATGTACAGACAATATGCATGGGAT
TGGCCGCCTCCATGGGGTCTTTTCTCCTGGCCGCCGGAGCAAGTACCAAA
CGTCTAGCATTCCCTCACGCTTGGCGCCAATGAGTTTTTTATTTGAGAGA
AAAAAGAAGACTATGCCTTCGCCATATGAATTCTTAATATTAAGTAATAA
TAGCATGGCACTTCGAATTCGATATGAAATTGTTAAGTGTTTTTTTTTTT
TCAAAATATTTGATTATGTATCGAAGCAATAGTATGAGATAAAGAAGGGG
GTATTCCGAGTTTATCTTTCCTTATCGGAGGGCCTATTGCAGCGGCCACA
CACCTTTTTTCCAGCCCAAAGAGGGTCTTAACAATTAAACATTAAACAAG
AATTTAAGGGTATGGAAAAAAATACAAAAAATAAAAAAAAAAAGAATTAA
TTTTTGAATTTATTTTCTTTTTTTTTTTTTTTGATTTTAAAAAAAAAAAA
AAAAAAAAACTCTAAGGGGGGGGGGCCGGGGACACCCCATTTTCCCCCCC
CTTAAAAGGGGATATTTAAATATAAAAAATTTTCCCGGGGGGCCCCCGCC
CTTTTTTTTTTAAACAACCCCCCCCGGTGGGGGGGCGGGGGGGGAAAAAA
AACCCCCCCCGGGGGGGTGTTGTTTT
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