DY305744

Overview
NameDY305744
Unique NameDY305744
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1276
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305744 vs. ExPASy Swiss-Prot
Match: CLPP_NEIMF (ATP-dependent Clp protease proteolytic subunit OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=clpP PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 6.905e-22
Identity = 48/101 (47.52%), Postives = 73/101 (72.28%), Query Frame = 2
Query:  419 FILINRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 721
            F + +RL +ER++FL   V  + +N ++  +++L  EN  KD++ +INSPGG V  G++IYDTM F++PDV T+C+G AASMG+FLL+AG   KR A P++
Sbjct:   22 FDIYSRLLKERIVFLVGPVTDESANLVVAQLLFLESENPDKDIFFYINSPGGSVTAGMSIYDTMNFIKPDVSTLCLGQAASMGAFLLSAGEKGKRFALPNS 122          
BLAST of DY305744 vs. ExPASy Swiss-Prot
Match: CLPP_NEIMB (ATP-dependent Clp protease proteolytic subunit OS=Neisseria meningitidis serogroup B GN=clpP PE=3 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 6.905e-22
Identity = 48/101 (47.52%), Postives = 73/101 (72.28%), Query Frame = 2
Query:  419 FILINRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 721
            F + +RL +ER++FL   V  + +N ++  +++L  EN  KD++ +INSPGG V  G++IYDTM F++PDV T+C+G AASMG+FLL+AG   KR A P++
Sbjct:   22 FDIYSRLLKERIVFLVGPVTDESANLVVAQLLFLESENPDKDIFFYINSPGGSVTAGMSIYDTMNFIKPDVSTLCLGQAASMGAFLLSAGEKGKRFALPNS 122          
BLAST of DY305744 vs. ExPASy Swiss-Prot
Match: CLPP_NEIMA (ATP-dependent Clp protease proteolytic subunit OS=Neisseria meningitidis serogroup A GN=clpP PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 6.905e-22
Identity = 48/101 (47.52%), Postives = 73/101 (72.28%), Query Frame = 2
Query:  419 FILINRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 721
            F + +RL +ER++FL   V  + +N ++  +++L  EN  KD++ +INSPGG V  G++IYDTM F++PDV T+C+G AASMG+FLL+AG   KR A P++
Sbjct:   22 FDIYSRLLKERIVFLVGPVTDESANLVVAQLLFLESENPDKDIFFYINSPGGSVTAGMSIYDTMNFIKPDVSTLCLGQAASMGAFLLSAGEKGKRFALPNS 122          
BLAST of DY305744 vs. ExPASy Swiss-Prot
Match: CLPP_NEIM0 (ATP-dependent Clp protease proteolytic subunit OS=Neisseria meningitidis serogroup C (strain 053442) GN=clpP PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 6.905e-22
Identity = 48/101 (47.52%), Postives = 73/101 (72.28%), Query Frame = 2
Query:  419 FILINRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 721
            F + +RL +ER++FL   V  + +N ++  +++L  EN  KD++ +INSPGG V  G++IYDTM F++PDV T+C+G AASMG+FLL+AG   KR A P++
Sbjct:   22 FDIYSRLLKERIVFLVGPVTDESANLVVAQLLFLESENPDKDIFFYINSPGGSVTAGMSIYDTMNFIKPDVSTLCLGQAASMGAFLLSAGEKGKRFALPNS 122          
BLAST of DY305744 vs. ExPASy Swiss-Prot
Match: CLPP_NEIG1 (ATP-dependent Clp protease proteolytic subunit OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=clpP PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 6.905e-22
Identity = 48/101 (47.52%), Postives = 73/101 (72.28%), Query Frame = 2
Query:  419 FILINRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 721
            F + +RL +ER++FL   V  + +N ++  +++L  EN  KD++ +INSPGG V  G++IYDTM F++PDV T+C+G AASMG+FLL+AG   KR A P++
Sbjct:   22 FDIYSRLLKERIVFLVGPVTDESANLVVAQLLFLESENPDKDIFFYINSPGGSVTAGMSIYDTMNFIKPDVSTLCLGQAASMGAFLLSAGEKGKRFALPNS 122          
BLAST of DY305744 vs. ExPASy Swiss-Prot
Match: CLPP_AZOSE (ATP-dependent Clp protease proteolytic subunit OS=Azoarcus sp. (strain EbN1) GN=clpP PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 6.905e-22
Identity = 50/99 (50.51%), Postives = 70/99 (70.71%), Query Frame = 2
Query:  425 LINRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 721
            + +RL +ER++FL   V    +N ++  +++L  EN  KD+Y +INSPGG V  G+AIYDTMQF++P V T+C+G AASMGSFLLAAG   KR   P++
Sbjct:   36 IYSRLLKERVIFLVGPVNDVTANLIVAQLLFLESENPDKDVYFYINSPGGSVSSGMAIYDTMQFIKPSVSTLCIGQAASMGSFLLAAGEKGKRFCLPNS 134          
BLAST of DY305744 vs. ExPASy Swiss-Prot
Match: CLPP_AZOSB (ATP-dependent Clp protease proteolytic subunit OS=Azoarcus sp. (strain BH72) GN=clpP PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 6.905e-22
Identity = 49/99 (49.49%), Postives = 71/99 (71.72%), Query Frame = 2
Query:  425 LINRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 721
            + +RL +ER++FL   V    +N ++  +++L  EN  KD+Y +INSPGG V  G+AIYDTMQF++P+V T+C+G AASMG+FLLAAG   KR   P++
Sbjct:   36 IYSRLLKERVVFLVGPVNDVTANLIVAQLLFLESENPDKDIYFYINSPGGSVTAGLAIYDTMQFIKPNVSTLCIGQAASMGAFLLAAGEKGKRFCLPNS 134          
BLAST of DY305744 vs. ExPASy Swiss-Prot
Match: CLPP_ACIC5 (ATP-dependent Clp protease proteolytic subunit OS=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) GN=clpP PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 6.905e-22
Identity = 48/99 (48.48%), Postives = 73/99 (73.74%), Query Frame = 2
Query:  425 LINRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 721
            + +RL R+ ++FLG  ++  I+N +I  +++LS E+  KD+ L+INSPGG +  G+AIYDTMQF++ DV T C+G AASMG+FLL +G + KR A P++
Sbjct:   20 IYSRLLRDNIIFLGTPIDDQIANLVIAQLLFLSAEDPDKDIQLYINSPGGSITAGLAIYDTMQFIKNDVVTYCIGQAASMGAFLLMSGTAGKRFALPNS 118          
BLAST of DY305744 vs. ExPASy Swiss-Prot
Match: CLPP_XYLFT (ATP-dependent Clp protease proteolytic subunit OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=clpP PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 9.018e-22
Identity = 49/99 (49.49%), Postives = 74/99 (74.75%), Query Frame = 2
Query:  425 LINRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 721
            + +RL +ERL+FL   ++  ++N ++  +++L  EN  KD+ ++INSPGG V  G+AIYDTMQ+++P V TIC+G AASMG+ LLA+GAS KR A P++
Sbjct:   27 IYSRLLKERLIFLVGPIDDYMANLIVAQLLFLEAENPEKDINIYINSPGGVVTAGMAIYDTMQYIKPAVSTICVGQAASMGALLLASGASGKRYALPNS 125          
BLAST of DY305744 vs. ExPASy Swiss-Prot
Match: CLPP_XYLFM (ATP-dependent Clp protease proteolytic subunit OS=Xylella fastidiosa (strain M12) GN=clpP PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 9.018e-22
Identity = 49/99 (49.49%), Postives = 74/99 (74.75%), Query Frame = 2
Query:  425 LINRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 721
            + +RL +ERL+FL   ++  ++N ++  +++L  EN  KD+ ++INSPGG V  G+AIYDTMQ+++P V TIC+G AASMG+ LLA+GAS KR A P++
Sbjct:   27 IYSRLLKERLIFLVGPIDDYMANLIVAQLLFLEAENPEKDINIYINSPGGVVTAGMAIYDTMQYIKPAVSTICVGQAASMGALLLASGASGKRYALPNS 125          
The following BLAST results are available for this feature:
BLAST of DY305744 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPP_NEIMF6.905e-2247.52ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_NEIMB6.905e-2247.52ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_NEIMA6.905e-2247.52ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_NEIM06.905e-2247.52ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_NEIG16.905e-2247.52ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_AZOSE6.905e-2250.51ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_AZOSB6.905e-2249.49ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_ACIC56.905e-2248.48ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_XYLFT9.018e-2249.49ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_XYLFM9.018e-2249.49ATP-dependent Clp protease proteolytic subunit OS=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM2AF08RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305744 ID=DY305744; Name=DY305744; organism=Citrus sinensis; type=EST; length=1276bp
GATAGCAAAAAAGAGACGTGGTATTGGGGTCATTTGTCTTATATGTGCAA
ATCAAAATCGGGCGAATCCTTACTCGGAGTAGAGCCTAAACCTAAAAAAA
TGGAAGAAGCCCATTCAATTCAGGAACAAGAAAATGGCATCGTGATTTTT
GGATCGGATCTCGATGAAAAAATACATCAATGAAAAGTTAGTTCGATAAG
TCGATAAGTTTAGTGAATTTCTTTTTTATATTAGAATATTATAGGTCTAG
GAAACCGGCTAAACTCAGCGTTCTTGAAAACCGGAAGAAAAGCCCCTCGA
TAGAAGCGAGGAAAAAAGAAAGGAAAGGGGCTAGGAGCTACACATTGATT
TGTTTTTCGCAAGTTTTGTTGAACCGTATGCATCAAAAGATGCCTGTACG
GCTCCGAAAGGATACTGTTTTATCCTAATCAACCGACTTTATCGAGAAAG
ATTACTTTTTTTAGGTCAAATGGTTGAGAGCGATATCTCGAATCAACTTA
TTGGTATTATGGTATATCTCAGTATAGAGAACGAGACCAAGGATTTGTAT
TTATTTATTAACTCTCCTGGCGGATGGGTAATACCCGGGATAGCAATTTA
TGATACTATGCAATTTGTGCGACCCGATGTACAGACAATATGCATGGGAT
TGGCCGCCTCCATGGGGTCTTTTCTCCTGGCCGCCGGAGCAAGTACCAAA
CGTCTAGCATTCCCTCACGCTTGGCGCCAATGAGTTTTTTATTTGAGAGA
AAAAAGAAGACTATGCCTTCGCCATATGAATTCTTAATATTAAGTAATAA
TAGCATGGCACTTCGAATTCGATATGAAATTGTTAAGTGTTTTTTTTTTT
TCAAAATATTTGATTATGTATCGAAGCAATAGTATGAGATAAAGAAGGGG
GTATTCCGAGTTTATCTTTCCTTATCGGAGGGCCTATTGCAGCGGCCACA
CACCTTTTTTCCAGCCCAAAGAGGGTCTTAACAATTAAACATTAAACAAG
AATTTAAGGGTATGGAAAAAAATACAAAAAATAAAAAAAAAAAGAATTAA
TTTTTGAATTTATTTTCTTTTTTTTTTTTTTTGATTTTAAAAAAAAAAAA
AAAAAAAAACTCTAAGGGGGGGGGGCCGGGGACACCCCATTTTCCCCCCC
CTTAAAAGGGGATATTTAAATATAAAAAATTTTCCCGGGGGGCCCCCGCC
CTTTTTTTTTTAAACAACCCCCCCCGGTGGGGGGGCGGGGGGGGAAAAAA
AACCCCCCCCGGGGGGGTGTTGTTTT
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