DY305744

Overview
NameDY305744
Unique NameDY305744
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1276
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305744 vs. ExPASy Swiss-Prot
Match: CLPP_CAPBU (ATP-dependent Clp protease proteolytic subunit OS=Capsella bursa-pastoris GN=clpP PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 2.790e-39
Identity = 77/99 (77.78%), Postives = 88/99 (88.89%), Query Frame = 2
Query:  425 LINRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 721
            + NRLYRERL FLGQ V+++ISNQLI +M+YLSIE +TKDLYLFINSPGGWVI G+AIYDTMQFVRPDVQTICMGLAAS+ SF+L  G  TKR+AFPHA
Sbjct:   23 IYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDTKDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGEITKRIAFPHA 121          
BLAST of DY305744 vs. ExPASy Swiss-Prot
Match: CLPP_ACOGR (ATP-dependent Clp protease proteolytic subunit OS=Acorus gramineus GN=clpP PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 3.644e-39
Identity = 76/99 (76.77%), Postives = 89/99 (89.90%), Query Frame = 2
Query:  425 LINRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 721
            + NRL+RERLLFLGQ ++S+ISNQL+G+MVYLSIE++T+D +LFINSPGGWVIPGI +YDTMQFV PDV TICMGLAASMGSF+L  G  TKRLAFPHA
Sbjct:   23 IYNRLHRERLLFLGQELDSEISNQLVGLMVYLSIEDKTRDFFLFINSPGGWVIPGIGLYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPHA 121          
BLAST of DY305744 vs. ExPASy Swiss-Prot
Match: CLPP_ACOCL (ATP-dependent Clp protease proteolytic subunit OS=Acorus calamus GN=clpP PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 3.644e-39
Identity = 76/99 (76.77%), Postives = 89/99 (89.90%), Query Frame = 2
Query:  425 LINRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 721
            + NRL+RERLLFLGQ ++S+ISNQL+G+MVYLSIE++T+D +LFINSPGGWVIPGI +YDTMQFV PDV TICMGLAASMGSF+L  G  TKRLAFPHA
Sbjct:   23 IYNRLHRERLLFLGQELDSEISNQLVGLMVYLSIEDKTRDFFLFINSPGGWVIPGIGLYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPHA 121          
BLAST of DY305744 vs. ExPASy Swiss-Prot
Match: CLPP_ARAHI (ATP-dependent Clp protease proteolytic subunit OS=Arabis hirsuta GN=clpP PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.809e-38
Identity = 77/99 (77.78%), Postives = 88/99 (88.89%), Query Frame = 2
Query:  425 LINRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 721
            + NRLYRERL FLGQ V+++ISNQLI +M+YLSIE +TKDLYLFINSPGGWVI G+AIYDTMQFVRPDVQTI MGLAAS+ SF+L  GA TKR+AFPHA
Sbjct:   23 IYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDTKDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTIGMGLAASIASFILVGGAITKRIAFPHA 121          
BLAST of DY305744 vs. ExPASy Swiss-Prot
Match: CLPP_CUSRE (ATP-dependent Clp protease proteolytic subunit OS=Cuscuta reflexa GN=clpP PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 4.455e-37
Identity = 72/99 (72.73%), Postives = 86/99 (86.87%), Query Frame = 2
Query:  425 LINRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 721
            + NRLYRER LFL  +VES I+NQL+G+ +YL +++ETKD++LFINSPGG +I G AIYDTMQFVRPD+QTIC+GLAASMGSFLL  GA TKRLAFPHA
Sbjct:   23 IYNRLYRERCLFLAHVVESQIANQLVGLFIYLGVQDETKDIFLFINSPGGGIISGFAIYDTMQFVRPDIQTICVGLAASMGSFLLVGGAITKRLAFPHA 121          
BLAST of DY305744 vs. ExPASy Swiss-Prot
Match: CLPP_CUCSA (ATP-dependent Clp protease proteolytic subunit OS=Cucumis sativus GN=clpP PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 1.693e-36
Identity = 74/99 (74.75%), Postives = 86/99 (86.87%), Query Frame = 2
Query:  425 LINRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 721
            L NRLYR+RLLFLGQ V ++ISNQ++G+MVYLSIE+ TKD YLFINSPGG VIPG+ ++DTMQFV PDV TIC+GLAASMGSF+L  G  TKRLAFPHA
Sbjct:   23 LYNRLYRQRLLFLGQDVNNEISNQIMGLMVYLSIEDGTKDQYLFINSPGGSVIPGVGLFDTMQFVSPDVHTICIGLAASMGSFILVGGEITKRLAFPHA 121          
BLAST of DY305744 vs. ExPASy Swiss-Prot
Match: CLPP_ANTFO (ATP-dependent Clp protease proteolytic subunit OS=Anthoceros formosae GN=clpP PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 5.446e-35
Identity = 71/97 (73.20%), Postives = 85/97 (87.63%), Query Frame = 2
Query:  431 NRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 721
            NRLYRERLLFLGQ V+ +I+NQLIGIM+YL+ E+E+KD+YL+INSPGG V+ GI++YDTMQFV PDV TICMGLAASMGSF+L  G  TKR+A PHA
Sbjct:   25 NRLYRERLLFLGQHVDDEIANQLIGIMMYLNGEDESKDMYLYINSPGGAVLAGISVYDTMQFVVPDVHTICMGLAASMGSFILTGGEITKRIALPHA 121          
BLAST of DY305744 vs. ExPASy Swiss-Prot
Match: CLPP_ANGEV (ATP-dependent Clp protease proteolytic subunit OS=Angiopteris evecta GN=clpP PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 5.446e-35
Identity = 70/98 (71.43%), Postives = 85/98 (86.73%), Query Frame = 2
Query:  428 INRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 721
            +NRLYRERLLFLGQ V+ +I+NQLIGIM+YL+ E+ET+D+YL+INSPGG V+PGI++YD MQFV PDV TICMGLAASMGS +L  G  TKR+A PHA
Sbjct:   23 VNRLYRERLLFLGQQVDDEIANQLIGIMMYLNGEDETQDMYLYINSPGGAVLPGISVYDAMQFVVPDVHTICMGLAASMGSSILTGGEITKRIALPHA 120          
BLAST of DY305744 vs. ExPASy Swiss-Prot
Match: CLPP_PHYPA (ATP-dependent Clp protease proteolytic subunit OS=Physcomitrella patens GN=clpP PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 9.289e-35
Identity = 71/97 (73.20%), Postives = 84/97 (86.60%), Query Frame = 2
Query:  431 NRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 721
            NRLYRERLLFLGQ V+ +I+NQLIGIM+YL+ E+E KD+YL+INSPGG V+ GI++YD MQFV PDV TICMGLAASMGSF+LA G  TKR+A PHA
Sbjct:   26 NRLYRERLLFLGQHVDDEIANQLIGIMMYLNGEDENKDMYLYINSPGGAVLAGISVYDAMQFVVPDVHTICMGLAASMGSFILAGGEITKRIALPHA 122          
BLAST of DY305744 vs. ExPASy Swiss-Prot
Match: CLPP_MARPO (ATP-dependent Clp protease proteolytic subunit OS=Marchantia polymorpha GN=clpP PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 1.213e-34
Identity = 70/97 (72.16%), Postives = 84/97 (86.60%), Query Frame = 2
Query:  431 NRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 721
            NRLYRERLLFLGQ V+ +I+NQLIGIM+YL+ E+E+KD+YL+INSPGG V+ GI++YD MQFV PDV TICMGLAASMGSF+L  G  TKR+A PHA
Sbjct:   25 NRLYRERLLFLGQQVDDEIANQLIGIMMYLNGEDESKDMYLYINSPGGAVLAGISVYDAMQFVVPDVHTICMGLAASMGSFILTGGEITKRIALPHA 121          
The following BLAST results are available for this feature:
BLAST of DY305744 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPP_CAPBU2.790e-3977.78ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_ACOGR3.644e-3976.77ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_ACOCL3.644e-3976.77ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_ARAHI1.809e-3877.78ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_CUSRE4.455e-3772.73ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_CUCSA1.693e-3674.75ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_ANTFO5.446e-3573.20ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_ANGEV5.446e-3571.43ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_PHYPA9.289e-3573.20ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_MARPO1.213e-3472.16ATP-dependent Clp protease proteolytic subunit OS=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM2AF08RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305744 ID=DY305744; Name=DY305744; organism=Citrus sinensis; type=EST; length=1276bp
GATAGCAAAAAAGAGACGTGGTATTGGGGTCATTTGTCTTATATGTGCAA
ATCAAAATCGGGCGAATCCTTACTCGGAGTAGAGCCTAAACCTAAAAAAA
TGGAAGAAGCCCATTCAATTCAGGAACAAGAAAATGGCATCGTGATTTTT
GGATCGGATCTCGATGAAAAAATACATCAATGAAAAGTTAGTTCGATAAG
TCGATAAGTTTAGTGAATTTCTTTTTTATATTAGAATATTATAGGTCTAG
GAAACCGGCTAAACTCAGCGTTCTTGAAAACCGGAAGAAAAGCCCCTCGA
TAGAAGCGAGGAAAAAAGAAAGGAAAGGGGCTAGGAGCTACACATTGATT
TGTTTTTCGCAAGTTTTGTTGAACCGTATGCATCAAAAGATGCCTGTACG
GCTCCGAAAGGATACTGTTTTATCCTAATCAACCGACTTTATCGAGAAAG
ATTACTTTTTTTAGGTCAAATGGTTGAGAGCGATATCTCGAATCAACTTA
TTGGTATTATGGTATATCTCAGTATAGAGAACGAGACCAAGGATTTGTAT
TTATTTATTAACTCTCCTGGCGGATGGGTAATACCCGGGATAGCAATTTA
TGATACTATGCAATTTGTGCGACCCGATGTACAGACAATATGCATGGGAT
TGGCCGCCTCCATGGGGTCTTTTCTCCTGGCCGCCGGAGCAAGTACCAAA
CGTCTAGCATTCCCTCACGCTTGGCGCCAATGAGTTTTTTATTTGAGAGA
AAAAAGAAGACTATGCCTTCGCCATATGAATTCTTAATATTAAGTAATAA
TAGCATGGCACTTCGAATTCGATATGAAATTGTTAAGTGTTTTTTTTTTT
TCAAAATATTTGATTATGTATCGAAGCAATAGTATGAGATAAAGAAGGGG
GTATTCCGAGTTTATCTTTCCTTATCGGAGGGCCTATTGCAGCGGCCACA
CACCTTTTTTCCAGCCCAAAGAGGGTCTTAACAATTAAACATTAAACAAG
AATTTAAGGGTATGGAAAAAAATACAAAAAATAAAAAAAAAAAGAATTAA
TTTTTGAATTTATTTTCTTTTTTTTTTTTTTTGATTTTAAAAAAAAAAAA
AAAAAAAAACTCTAAGGGGGGGGGGCCGGGGACACCCCATTTTCCCCCCC
CTTAAAAGGGGATATTTAAATATAAAAAATTTTCCCGGGGGGCCCCCGCC
CTTTTTTTTTTAAACAACCCCCCCCGGTGGGGGGGCGGGGGGGGAAAAAA
AACCCCCCCCGGGGGGGTGTTGTTTT
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