DY305744

Overview
NameDY305744
Unique NameDY305744
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1276
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY305744 vs. ExPASy Swiss-Prot
Match: CLPP_SACHY (ATP-dependent Clp protease proteolytic subunit OS=Saccharum hybrid GN=clpP PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 3.653e-31
Identity = 62/99 (62.63%), Postives = 79/99 (79.80%), Query Frame = 2 
Query:  425 LINRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 721
            L N +YRER LFLGQ +  +I+N + G+MVYLSIE+   D++LFINSPGGW+I G+AI+DTMQ V PD+ TIC+G+AASM SF+L  G  TKR+AFPHA
Sbjct:   23 LYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDGNSDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPHA 121
[Close]
BLAST of DY305744 vs. ExPASy Swiss-Prot
Match: CLPP_WHEAT (ATP-dependent Clp protease proteolytic subunit OS=Triticum aestivum GN=clpP PE=3 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 4.771e-31
Identity = 62/99 (62.63%), Postives = 79/99 (79.80%), Query Frame = 2 
Query:  425 LINRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 721
            L N +YRER LFLGQ +  +I+N + G+MVYLSIE+   D++LFINSPGGW+I G+AI+DTMQ V PD+ TIC+G+AASM SF+L  G  TKR+AFPHA
Sbjct:   23 LYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDGISDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPHA 121
[Close]
BLAST of DY305744 vs. ExPASy Swiss-Prot
Match: CLPP_ORYSJ (ATP-dependent Clp protease proteolytic subunit OS=Oryza sativa subsp. japonica GN=clpP PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 6.231e-31
Identity = 61/99 (61.62%), Postives = 79/99 (79.80%), Query Frame = 2 
Query:  425 LINRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 721
            L N +YRER LFLGQ +  +++N + G+MVYLSIE+   D++LFINSPGGW+I G+AI+DTMQ V PD+ TIC+G+AASM SF+L  G  TKR+AFPHA
Sbjct:   23 LYNVMYRERTLFLGQEIRCEVTNHITGLMVYLSIEDGISDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPHA 121
[Close]
BLAST of DY305744 vs. ExPASy Swiss-Prot
Match: CLPP_ORYSI (ATP-dependent Clp protease proteolytic subunit OS=Oryza sativa subsp. indica GN=clpP PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 6.231e-31
Identity = 61/99 (61.62%), Postives = 79/99 (79.80%), Query Frame = 2 
Query:  425 LINRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 721
            L N +YRER LFLGQ +  +++N + G+MVYLSIE+   D++LFINSPGGW+I G+AI+DTMQ V PD+ TIC+G+AASM SF+L  G  TKR+AFPHA
Sbjct:   23 LYNVMYRERTLFLGQEIRCEVTNHITGLMVYLSIEDGISDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPHA 121
[Close]
BLAST of DY305744 vs. ExPASy Swiss-Prot
Match: CLPP_ORYSA (ATP-dependent Clp protease proteolytic subunit OS=Oryza sativa GN=clpP PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 6.231e-31
Identity = 61/99 (61.62%), Postives = 79/99 (79.80%), Query Frame = 2 
Query:  425 LINRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 721
            L N +YRER LFLGQ +  +++N + G+MVYLSIE+   D++LFINSPGGW+I G+AI+DTMQ V PD+ TIC+G+AASM SF+L  G  TKR+AFPHA
Sbjct:   23 LYNVMYRERTLFLGQEIRCEVTNHITGLMVYLSIEDGISDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPHA 121
[Close]
BLAST of DY305744 vs. ExPASy Swiss-Prot
Match: CLPP_ORYNI (ATP-dependent Clp protease proteolytic subunit OS=Oryza nivara GN=clpP PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 6.231e-31
Identity = 61/99 (61.62%), Postives = 79/99 (79.80%), Query Frame = 2 
Query:  425 LINRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 721
            L N +YRER LFLGQ +  +++N + G+MVYLSIE+   D++LFINSPGGW+I G+AI+DTMQ V PD+ TIC+G+AASM SF+L  G  TKR+AFPHA
Sbjct:   23 LYNVMYRERTLFLGQEIRCEVTNHITGLMVYLSIEDGISDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPHA 121
[Close]
BLAST of DY305744 vs. ExPASy Swiss-Prot
Match: CLPP_AGRST (ATP-dependent Clp protease proteolytic subunit OS=Agrostis stolonifera GN=clpP PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 8.138e-31
Identity = 62/99 (62.63%), Postives = 79/99 (79.80%), Query Frame = 2 
Query:  425 LINRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 721
            L N +YRER LFLGQ +  +I+N + G+MVYLSIE+   D++LFINSPGGW+I G+AI+DTMQ V PD+ TIC+G+AASM SF+L  G  TKR+AFPHA
Sbjct:   23 LYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDGISDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGVAASMASFVLIGGEPTKRIAFPHA 121
[Close]
BLAST of DY305744 vs. ExPASy Swiss-Prot
Match: CLPP_HORVU (ATP-dependent Clp protease proteolytic subunit OS=Hordeum vulgare GN=clpP PE=3 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 1.813e-30
Identity = 61/99 (61.62%), Postives = 78/99 (78.79%), Query Frame = 2 
Query:  425 LINRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 721
            L N +YRER LFLGQ +  +I+N + G+MVYLSIE+   D++LFINSPGGW+I G+AI+DTMQ V PD+ TIC+G+AASM SF+L  G   KR+AFPHA
Sbjct:   23 LYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDGISDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPAKRIAFPHA 121
[Close]
BLAST of DY305744 vs. ExPASy Swiss-Prot
Match: CLPP2_ANAVT (ATP-dependent Clp protease proteolytic subunit 2 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=clpP2 PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 3.092e-30
Identity = 62/99 (62.63%), Postives = 81/99 (81.82%), Query Frame = 2 
Query:  425 LINRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 721
            + +RLYRER++FLG+ V+ +I+NQ+I +M+YL  E+  KD+YL+INSPGG V  G+AIYDTMQ ++ DV TIC+GLAASMGSFLLAAG   KRLA PH+
Sbjct:   23 IYDRLYRERIIFLGRDVDDEIANQIIAVMLYLDSEDPGKDIYLYINSPGGMVTSGLAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRLALPHS 121
[Close]
BLAST of DY305744 vs. ExPASy Swiss-Prot
Match: CLPP_CUSGR (ATP-dependent Clp protease proteolytic subunit OS=Cuscuta gronovii GN=clpP PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 4.039e-30
Identity = 61/99 (61.62%), Postives = 76/99 (76.77%), Query Frame = 2 
Query:  425 LINRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHA 721
            + NRLYRER LFL   + + I NQL G+ +YL I+++ KD++ F+NSPGG +I G+AIYD+MQ VRPD QTIC+GLAASM  FLL  G  TKRLAFPHA
Sbjct:   23 IYNRLYRERCLFLTHTINTKIGNQLAGLFIYLGIQDDPKDIFFFLNSPGGGIISGLAIYDSMQVVRPDTQTICVGLAASMACFLLVGGTITKRLAFPHA 121
The following BLAST results are available for this feature:
BLAST of DY305744 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPP_SACHY3.653e-3162.63ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_WHEAT4.771e-3162.63ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_ORYSJ6.231e-3161.62ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_ORYSI6.231e-3161.62ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_ORYSA6.231e-3161.62ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_ORYNI6.231e-3161.62ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_AGRST8.138e-3162.63ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_HORVU1.813e-3061.62ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP2_ANAVT3.092e-3062.63ATP-dependent Clp protease proteolytic subunit 2 O... [more]
CLPP_CUSGR4.039e-3061.62ATP-dependent Clp protease proteolytic subunit OS=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM2AF08RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305744 ID=DY305744; Name=DY305744; organism=Citrus sinensis; type=EST; length=1276bp
GATAGCAAAAAAGAGACGTGGTATTGGGGTCATTTGTCTTATATGTGCAA
ATCAAAATCGGGCGAATCCTTACTCGGAGTAGAGCCTAAACCTAAAAAAA
TGGAAGAAGCCCATTCAATTCAGGAACAAGAAAATGGCATCGTGATTTTT
GGATCGGATCTCGATGAAAAAATACATCAATGAAAAGTTAGTTCGATAAG
TCGATAAGTTTAGTGAATTTCTTTTTTATATTAGAATATTATAGGTCTAG
GAAACCGGCTAAACTCAGCGTTCTTGAAAACCGGAAGAAAAGCCCCTCGA
TAGAAGCGAGGAAAAAAGAAAGGAAAGGGGCTAGGAGCTACACATTGATT
TGTTTTTCGCAAGTTTTGTTGAACCGTATGCATCAAAAGATGCCTGTACG
GCTCCGAAAGGATACTGTTTTATCCTAATCAACCGACTTTATCGAGAAAG
ATTACTTTTTTTAGGTCAAATGGTTGAGAGCGATATCTCGAATCAACTTA
TTGGTATTATGGTATATCTCAGTATAGAGAACGAGACCAAGGATTTGTAT
TTATTTATTAACTCTCCTGGCGGATGGGTAATACCCGGGATAGCAATTTA
TGATACTATGCAATTTGTGCGACCCGATGTACAGACAATATGCATGGGAT
TGGCCGCCTCCATGGGGTCTTTTCTCCTGGCCGCCGGAGCAAGTACCAAA
CGTCTAGCATTCCCTCACGCTTGGCGCCAATGAGTTTTTTATTTGAGAGA
AAAAAGAAGACTATGCCTTCGCCATATGAATTCTTAATATTAAGTAATAA
TAGCATGGCACTTCGAATTCGATATGAAATTGTTAAGTGTTTTTTTTTTT
TCAAAATATTTGATTATGTATCGAAGCAATAGTATGAGATAAAGAAGGGG
GTATTCCGAGTTTATCTTTCCTTATCGGAGGGCCTATTGCAGCGGCCACA
CACCTTTTTTCCAGCCCAAAGAGGGTCTTAACAATTAAACATTAAACAAG
AATTTAAGGGTATGGAAAAAAATACAAAAAATAAAAAAAAAAAGAATTAA
TTTTTGAATTTATTTTCTTTTTTTTTTTTTTTGATTTTAAAAAAAAAAAA
AAAAAAAAACTCTAAGGGGGGGGGGCCGGGGACACCCCATTTTCCCCCCC
CTTAAAAGGGGATATTTAAATATAAAAAATTTTCCCGGGGGGCCCCCGCC
CTTTTTTTTTTAAACAACCCCCCCCGGTGGGGGGGCGGGGGGGGAAAAAA
AACCCCCCCCGGGGGGGTGTTGTTTT
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