DY305715
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305715 vs. ExPASy Swiss-Prot
Match: ATL5C_ARATH (RING-H2 finger protein ATL5C OS=Arabidopsis thaliana GN=ATL5C PE=2 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 2.662e-18 Identity = 61/179 (34.08%), Postives = 87/179 (48.60%), Query Frame = 2 Query: 164 TSSFCSPPCLTSCPSYCHNFLQSLIPTPSPVTFKYHIHHKSRKFLIITASALVTTIVAVLCYVVFVKFYLRRRSS---SEPRILNETHDDFLDEDHGPVVDHPIWYINTVGLQSSVIREIAVLKYKKSDGLVEGTECSVCLSEFQEDETLRLLPKCNHAFHISCIDTWLRSHTNCPLCR 691 T+S PP P HNF SL+P + V ++TA +T ++ +++VK RR S + P+ T + G VV G+ SVI + V ++ G +G EC+VCL+ F+ E LRLLPKC HAFH+ C+DTWL +H+ CPLCR Sbjct: 31 TTSDTPPPLPPPSPPPRHNFTSSLMPGIAVV------------IAVLTAFFSLTFLL-----LLYVKHCKRRNGSVYVNHPQRFAITRYGGGYYNGGGVVGGR----KNSGIDRSVIESLPVFRFGALSGHKDGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCR 188
BLAST of DY305715 vs. ExPASy Swiss-Prot
Match: ATL3L_ARATH (RING-H2 finger protein ATL3L OS=Arabidopsis thaliana GN=ATL3L PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 4.541e-18 Identity = 48/155 (30.97%), Postives = 78/155 (50.32%), Query Frame = 2 Query: 290 KFLIITASALVTTIVAVLCYVVFVKFYLRRRSSSEPRILNETHDDFLDEDHGPVVDHPIWYINTVGLQSSVIREIAVLKYKKSDGLVEGTECSVCLSEFQEDETLRLLPKCNHAFHISCIDTWLRSHTNCPLCRSPIVKINHAARAPPSSSTWES 754 K ++ + L ++ +LC+ + ++ RR++ R ++ H L P + L +V+ +I + Y ECSVCLSEF+ED+ R+LPKC H FH+ CIDTW RS ++CPLCR+P+ P ++ + S Sbjct: 27 KIMLASVIILFVAVILILCFHSYARWLFRRQNRRIRRRIS-AHLRSLAAARDPTQSSS----SLSPLDPTVLEKIPIFVYSVKTHESPLEECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRSSCPLCRAPVQPAQPVTEPEPVAAVFPS 176
BLAST of DY305715 vs. ExPASy Swiss-Prot
Match: ATL4K_ARATH (RING-H2 finger protein ATL4K OS=Arabidopsis thaliana GN=ATL4K PE=2 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 1.321e-17 Identity = 47/115 (40.87%), Postives = 70/115 (60.87%), Query Frame = 2 Query: 464 IWYINTVGLQSSVIREIAVLKYKKSDGLVEGT-ECSVCLSEFQEDETLRLLPKCNHAFHISCIDTWLRSHTNCPLCRSPIVKINHAARAPPS-------SSTWESNNEDSGTRES 784 +++++ G+ S I + V YK GL +C+VCL EF+ ++ LRLLPKC+HAFH+ CIDTWL SH+ CPLCRS ++ + + P S S++ S+ E G R+S Sbjct: 100 LFHLHDSGVDQSFIDTLPVFHYKSIIGLKNYPFDCAVCLCEFETEDKLRLLPKCSHAFHMDCIDTWLLSHSTCPLCRSSLLSDLSSHQDPRSSFLLVLESASDHSSREIGGDRDS 214
BLAST of DY305715 vs. ExPASy Swiss-Prot
Match: ATL2C_ARATH (Putative RING-H2 finger protein ATL2C OS=Arabidopsis thaliana GN=ATL2C PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.725e-17 Identity = 55/166 (33.13%), Postives = 86/166 (51.81%), Query Frame = 2 Query: 224 LQSLIPTPSPVTFKYHIHHKSRKFLIITASALVTTIVAVLCYV-----VFVKFYLRRRSSSEPRILNETHDDFLDEDHGPVVDHPIWYINTVGLQSSVIREIAVLKYKKSDGL-VEGTECSVCLSEFQEDETLRLLPKCNHAFHISCIDTWLRSHTNCPLCRSPIV 703 L S P P + K + + I L+ I++++ ++ + VKF L S E + D + G + ++ ++ G+ S+I + V YK GL + +C VCL EF+ ++ LRLLPKC+HAFH+ CIDTWL SH+ CPLCRS ++ Sbjct: 14 LISSSPPPPLIPLKSNTSLSNLNSKITPNILLIIIILSIIFFISGLLHILVKFLLTPSRESR-----EDYFDNVTALQGQL--QQLFNLHDSGVDQSLIDTLPVFHYKSIVGLKISPFDCPVCLCEFETEDKLRLLPKCSHAFHVECIDTWLLSHSTCPLCRSNLL 172
BLAST of DY305715 vs. ExPASy Swiss-Prot
Match: ATL4J_ARATH (RING-H2 finger protein ATL4J OS=Arabidopsis thaliana GN=ATL4J PE=2 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 2.253e-17 Identity = 50/147 (34.01%), Postives = 72/147 (48.98%), Query Frame = 2 Query: 485 GLQSSVIREIAVLKYKKSDGLVEGTECSVCLSEFQEDETLRLLPKCNHAFHISCIDTWLRSHTNCPLCRSPIVKINHAARAPPSSSTWESNNEDSGTRESTQVGILTENGGRNDMESEIGAVERRNITKEMIKILMTRYNNKKISFL 925 GL + I + + ++ G +G +CSVCLS+F+ E LRLLPKC HAFHI CID WL H CPLCR + ++ +S N + S ++ I E E+ R +I + KIL + NK+ + L Sbjct: 97 GLDKTAIESLPLFRFSALKGSKQGLDCSVCLSKFESVEILRLLPKCRHAFHIGCIDQWLEQHATCPLCRDRVSMEEDSSVLTNGNSFRFLNQSEIREDSSLELYIEREEEEERIHREELSGSSRFSIGESFRKIL--KLGNKEKTLL 241
BLAST of DY305715 vs. ExPASy Swiss-Prot
Match: ATL2N_ARATH (RING-H2 finger protein ATL2N OS=Arabidopsis thaliana GN=ATL2N PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 2.943e-17 Identity = 47/139 (33.81%), Postives = 70/139 (50.36%), Query Frame = 2 Query: 290 KFLIITASALVTTIVAVLCYVVFVKFYLRRRSSSEPRILNETHDDFLDEDHGPVVDHPIWYINTVGLQSSVIREIAVLKY--KKSDGLVEGTECSVCLSEFQEDETLRLLPKCNHAFHISCIDTWLRSHTNCPLCRSPI 700 K ++ + L ++ +LC+ + ++ RR + RI P L +V+ +I + Y K E ECSVCLSEF+E++ RLLPKC H+FH+ CIDTW RS + CPLCR+P+ Sbjct: 27 KIMLSSVIVLFVAVIMILCFHSYARWLFRRHNR---RIRRRIRSHLRTLSASP---------RDQALDQAVLDKIPIFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGHSFHVDCIDTWFRSRSTCPLCRAPV 153
BLAST of DY305715 vs. ExPASy Swiss-Prot
Match: ATL5A_ARATH (RING-H2 finger protein ATL5A OS=Arabidopsis thaliana GN=ATL5A PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.118e-16 Identity = 34/78 (43.59%), Postives = 55/78 (70.51%), Query Frame = 2 Query: 485 GLQSSVIREIAVLKYKKSDGLVEGTECSVCLSEFQEDETLRLLPKCNHAFHISCIDTWLRSHTNCPLCRSPIVKINHA 718 GL+ +++ V +Y + + TEC++CL EF + E +R+LP CNH+FH+SCIDTWL SH++CP CR +++++ A Sbjct: 79 GLKKRELKKFPVAEYGSGEVKIAATECAICLGEFADGERVRVLPPCNHSFHMSCIDTWLVSHSSCPNCRHSLIEVHVA 156
BLAST of DY305715 vs. ExPASy Swiss-Prot
Match: ATL5I_ARATH (RING-H2 finger protein ATL5I OS=Arabidopsis thaliana GN=ATL5I PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.461e-16 Identity = 60/201 (29.85%), Postives = 94/201 (46.77%), Query Frame = 2 Query: 299 IITASALVTTIVAVLCYV-----VFVKFYLRRRSSSEPRILNETHDDFLDEDHGPVVDHPIWYINTVGLQSSVIREIAVLKYKKSDGLVEGT----------ECSVCLSEFQEDETLRLLPKCNHAFHISCIDTWLRSHTNCPLCRSPIVKINHAARAPPSSSTWESNNEDSGTRESTQVGILTENGGRNDMESEIGAVER 856 I A V I+AVL ++ + V+F ++ S++ N + D ++++N GL + I + V YK+ G G +C+VCL EF E + LRLLP C+HAFH++CIDTWL+S++ CPLCR + + P +E+ +TENG + ME + VE+ Sbjct: 41 ISPAVLFVIVILAVLFFISGLLHLLVRFLIKHPSATASSRSNR-FPEISTSDALQRQLQQLFHLNDSGLDQAFIDALPVFHYKEIVGSAGGGGGNGAAQEPFDCAVCLCEFSEKDKLRLLPMCSHAFHLNCIDTWLQSNSTCPLCRGTLFSPGFSMENPMFDFDDIREDEEG----------VTENGSQKTMEIQEIVVEK 230
BLAST of DY305715 vs. ExPASy Swiss-Prot
Match: ATL3I_ARATH (RING-H2 finger protein ATL3I OS=Arabidopsis thaliana GN=ATL3I PE=2 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 1.461e-16 Identity = 51/140 (36.43%), Postives = 83/140 (59.29%), Query Frame = 2 Query: 296 LIITASALVTTIVAVLCYVVFVKFYLRRRSSSEPRILNETHDDFLDEDHGPVVDHPIWYINTVGLQSSVIREIAVLKYKK-SDGLVEGTECSVCLSEFQEDETLRLLPKCNHAFHISCIDTWLRSHTNCPLCRSPIVKIN 712 L+I+ AL+ + VL Y++F +LR+ S+ P I + ++ L P + H +++++ GL + I + V Y + L + +C+VCL+EF + + LRLLP C+HAFH+ CIDTWL S++ CPLCR + N Sbjct: 122 LVISGLALIIVFLGVL-YLIFK--FLRKSSTLFP-IPHFNYNPDLFSFSSPQLQH-LFFLHDSGLDQTAIDALPVFLYGNVTISLEQPFDCAVCLNEFSDTDKLRLLPVCSHAFHLHCIDTWLLSNSTCPLCRRSLSTSN 256
BLAST of DY305715 vs. ExPASy Swiss-Prot
Match: ATL1C_ARATH (RING-H2 finger protein ATL1C OS=Arabidopsis thaliana GN=ATL1C PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.461e-16 Identity = 58/191 (30.37%), Postives = 85/191 (44.50%), Query Frame = 2 Query: 305 TASALVTTIVAVLCYVVFVKFYLRRRSSSEPRILNETHDDFLDEDHGPVVDHPIWYINTVGLQSSVIREIAVLKYKKSDGL---VEGTECSVCLSEFQEDETLRLLPKCNHAFHISCIDTWLRSHTNCPLCRSPIVKINHAARAPPSSSTWESNNEDSGTRESTQVGILTENGGRNDMESEIGAVERRNIT 868 T + ++ +V+V + + Y+RR H +D GP + GL +SVI Y L E EC VCL+EF++DETLRL+P+C H FH CID WLRS T CPLCR+ +V + G S+++ L G+N + + I +R +T Sbjct: 38 TTAIIMIVLVSVFFALGCISVYMRRCLQ---------HALGMDSGGGPGNWLNVRQTTEPGLDASVIETFPTFPYSTVKTLRIGKEALECPVCLNEFEDDETLRLIPQCCHVFHPGCIDAWLRSQTTCPLCRANLVPV-------------------PGESVSSEIPGLARETGQNSLRTPIDDNRKRVLT 200 The following BLAST results are available for this feature:
BLAST of DY305715 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305715 ID=DY305715; Name=DY305715; organism=Citrus sinensis; type=EST; length=1258bpback to top |