EY702591

Overview
NameEY702591
Unique NameEY702591
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length963
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702591 vs. ExPASy Swiss-Prot
Match: RBS1_MESCR (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Mesembryanthemum crystallinum GN=RBCS-1 PE=2 SV=2)

HSP 1 Score: 146.362 bits (368), Expect = 2.963e-41
Identity = 64/113 (56.64%), Postives = 85/113 (75.22%), Query Frame = 3
Query:  186 KTNNDITSIASNGGRLQCMKVWPPTGLKKLETPSYLPPLADEALLKEITYLLRSGWIPCSEFQLEKGWVDREHPHSPRYYDGRYWTTAKPALYGRTDAAAGLNGVREGPREYP 524
            K NNDITS+A+NGGR+QCM+VWPP G KK ET SYLPPL++E+L+KE+ YLL +GW+PC EF+   G+V REH ++P YYDGRYWT  K  ++G TD +  +  + E  + YP
Sbjct:   40 KKNNDITSVATNGGRVQCMQVWPPLGKKKFETLSYLPPLSEESLMKEVQYLLNNGWVPCLEFEPTHGFVYREHGNTPGYYDGRYWTMWKLPMFGCTDPSQVVAELEEAKKAYP 152          

HSP 2 Score: 44.2838 bits (103), Expect = 2.963e-41
Identity = 24/33 (72.73%), Postives = 26/33 (78.79%), Query Frame = 1
Query:   61 LASSMISSTTVATANRASLAQASMVAPFTGLKS 159
            +ASSM+SS  VAT NR   AQASMVAPF GLKS
Sbjct:    1 MASSMVSSAAVATVNRTP-AQASMVAPFNGLKS 32          
BLAST of EY702591 vs. ExPASy Swiss-Prot
Match: RBS1_SOLLC (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Solanum lycopersicum GN=RBCS-1 PE=2 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 2.965e-41
Identity = 70/116 (60.34%), Postives = 87/116 (75.00%), Query Frame = 3
Query:  180 TKKTNN-DITSIASNGGRLQCMKVWPPTGLKKLETPSYLPPLADEALLKEITYLLRSGWIPCSEFQLEKGWVDREHPHSPRYYDGRYWTTAKPALYGRTDAAAGLNGVREGPREYP 524
            TKK NN DITS+ASNGGR++CM+VWPP  +KK ET SYLP L+DE LL EI YLL++GW+PC EF+ E+G+V RE+  SP YYDGRYWT  K  ++G TDA   L  V+E  + YP
Sbjct:   38 TKKNNNVDITSLASNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEFETERGFVYRENNSSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYP 153          

HSP 2 Score: 42.743 bits (99), Expect = 2.965e-41
Identity = 22/35 (62.86%), Postives = 30/35 (85.71%), Query Frame = 1
Query:   61 LASSMISSTTVATANRASLAQASMVAPFTGLKSSS 165
            +ASS++SS   AT  R+++AQASMVAPFTGLKS++
Sbjct:    1 MASSIVSSAAAAT--RSNVAQASMVAPFTGLKSAA 33          
BLAST of EY702591 vs. ExPASy Swiss-Prot
Match: RBSB_SOLTU (Ribulose bisphosphate carboxylase small chain 2B, chloroplastic OS=Solanum tuberosum GN=RBCS-2B PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.113e-40
Identity = 68/115 (59.13%), Postives = 85/115 (73.91%), Query Frame = 3
Query:  180 TKKTNNDITSIASNGGRLQCMKVWPPTGLKKLETPSYLPPLADEALLKEITYLLRSGWIPCSEFQLEKGWVDREHPHSPRYYDGRYWTTAKPALYGRTDAAAGLNGVREGPREYP 524
            ++K N DITSIASNGGR++CM+VWPP  +KK ET SYLP L+DE LLKE+ YLL++GW+PC EF+ E G+V RE+  SP YYDGRYWT  K  ++G TDA   L  V E  + YP
Sbjct:   38 SRKQNLDITSIASNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYP 152          

HSP 2 Score: 41.9726 bits (97), Expect = 1.113e-40
Identity = 23/35 (65.71%), Postives = 29/35 (82.86%), Query Frame = 1
Query:   61 LASSMISSTTVATANRASLAQASMVAPFTGLKSSS 165
            +ASS++SS  VAT  RA+ AQASMV PFTGLKS++
Sbjct:    1 MASSIVSSAAVAT--RANGAQASMVGPFTGLKSTA 33          
BLAST of EY702591 vs. ExPASy Swiss-Prot
Match: RBS_STELP (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Stellaria longipes GN=RBCS PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.451e-40
Identity = 68/115 (59.13%), Postives = 84/115 (73.04%), Query Frame = 3
Query:  180 TKKTNNDITSIASNGGRLQCMKVWPPTGLKKLETPSYLPPLADEALLKEITYLLRSGWIPCSEFQLEKGWVDREHPHSPRYYDGRYWTTAKPALYGRTDAAAGLNGVREGPREYP 524
            ++KTN DITSIASNGGR++CM+VWPP  +KK ET SYLP L+ E LL EI YLL++GW+PC EF+ E G+V REH  SP YYDGRYWT  K  ++G TDA      V+E  + YP
Sbjct:   38 SRKTNLDITSIASNGGRVRCMQVWPPINMKKYETLSYLPDLSSEQLLSEIEYLLKNGWVPCLEFETEHGFVYREHTSSPGYYDGRYWTMWKLPMFGCTDATQVAAEVQEAKKAYP 152          

HSP 2 Score: 41.5874 bits (96), Expect = 1.451e-40
Identity = 23/35 (65.71%), Postives = 30/35 (85.71%), Query Frame = 1
Query:   61 LASSMISSTTVATANRASLAQASMVAPFTGLKSSS 165
            +ASS++SS  VAT  R++ AQASMVAPFTGLKS++
Sbjct:    1 MASSIMSSAAVAT--RSNGAQASMVAPFTGLKSNA 33          
BLAST of EY702591 vs. ExPASy Swiss-Prot
Match: RBSC_SOLTU (Ribulose bisphosphate carboxylase small chain 2C, chloroplastic OS=Solanum tuberosum GN=RBCS-2C PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.890e-40
Identity = 68/115 (59.13%), Postives = 85/115 (73.91%), Query Frame = 3
Query:  180 TKKTNNDITSIASNGGRLQCMKVWPPTGLKKLETPSYLPPLADEALLKEITYLLRSGWIPCSEFQLEKGWVDREHPHSPRYYDGRYWTTAKPALYGRTDAAAGLNGVREGPREYP 524
            ++K N DITSIASNGGR++CM+VWPP  +KK ET SYLP L+DE LLKE+ YLL++GW+PC EF+ E G+V RE+  SP YYDGRYWT  K  ++G TDA   L  V E  + YP
Sbjct:   38 SRKQNLDITSIASNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYP 152          

HSP 2 Score: 41.2022 bits (95), Expect = 1.890e-40
Identity = 23/35 (65.71%), Postives = 29/35 (82.86%), Query Frame = 1
Query:   61 LASSMISSTTVATANRASLAQASMVAPFTGLKSSS 165
            +ASS++SS  VAT  R + AQASMVAPFTGLKS++
Sbjct:    1 MASSVMSSAAVAT--RGNGAQASMVAPFTGLKSTA 33          
BLAST of EY702591 vs. ExPASy Swiss-Prot
Match: RBSA_SOLTU (Ribulose bisphosphate carboxylase small chain 2A, chloroplastic OS=Solanum tuberosum GN=RBCS-2A PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.890e-40
Identity = 68/115 (59.13%), Postives = 85/115 (73.91%), Query Frame = 3
Query:  180 TKKTNNDITSIASNGGRLQCMKVWPPTGLKKLETPSYLPPLADEALLKEITYLLRSGWIPCSEFQLEKGWVDREHPHSPRYYDGRYWTTAKPALYGRTDAAAGLNGVREGPREYP 524
            ++K N DITSIASNGGR++CM+VWPP  +KK ET SYLP L+DE LLKE+ YLL++GW+PC EF+ E G+V RE+  SP YYDGRYWT  K  ++G TDA   L  V E  + YP
Sbjct:   38 SRKQNLDITSIASNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYP 152          

HSP 2 Score: 41.2022 bits (95), Expect = 1.890e-40
Identity = 23/35 (65.71%), Postives = 29/35 (82.86%), Query Frame = 1
Query:   61 LASSMISSTTVATANRASLAQASMVAPFTGLKSSS 165
            +ASS++SS  VAT  R + AQASMVAPFTGLKS++
Sbjct:    1 MASSVMSSAAVAT--RGNGAQASMVAPFTGLKSAA 33          
BLAST of EY702591 vs. ExPASy Swiss-Prot
Match: RBS_CAPAN (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Capsicum annuum GN=RBCS PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 2.461e-40
Identity = 71/115 (61.74%), Postives = 84/115 (73.04%), Query Frame = 3
Query:  180 TKKTNNDITSIASNGGRLQCMKVWPPTGLKKLETPSYLPPLADEALLKEITYLLRSGWIPCSEFQLEKGWVDREHPHSPRYYDGRYWTTAKPALYGRTDAAAGLNGVREGPREYP 524
            T+K + DITSIASNGGR++CM VWPP   KK ET SYLP L+DE LLKEI YLL+ GW+PC EF+ E G+V REH  SP YYDGRYWT  K  ++G TDA   LN V+E  + YP
Sbjct:   38 TRKQDLDITSIASNGGRVECMLVWPPINKKKYETLSYLPDLSDEQLLKEIEYLLQKGWVPCLEFETEHGFVYREHHRSPGYYDGRYWTMWKLPMFGCTDATQVLNEVQEAKKAYP 152          

HSP 2 Score: 37.3502 bits (85), Expect = 2.461e-40
Identity = 20/35 (57.14%), Postives = 28/35 (80.00%), Query Frame = 1
Query:   61 LASSMISSTTVATANRASLAQASMVAPFTGLKSSS 165
            +ASS++S+ TVAT   A+ AQASM+A F GLKS++
Sbjct:    1 MASSVMSTATVATG--ANAAQASMIASFNGLKSAA 33          
BLAST of EY702591 vs. ExPASy Swiss-Prot
Match: RBS6_MESCR (Ribulose bisphosphate carboxylase small chain 6, chloroplastic OS=Mesembryanthemum crystallinum GN=RBCS-6 PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 2.461e-40
Identity = 61/115 (53.04%), Postives = 87/115 (75.65%), Query Frame = 3
Query:  180 TKKTNNDITSIASNGGRLQCMKVWPPTGLKKLETPSYLPPLADEALLKEITYLLRSGWIPCSEFQLEKGWVDREHPHSPRYYDGRYWTTAKPALYGRTDAAAGLNGVREGPREYP 524
            T+K++ND++++ SNGG++QCM+VWPP G KK ET SYLPPL++E+LLKE+ YLL +GW+PC EF+   G+V REH ++P YYDGRYWT  K  ++G TD +  +  + E  + YP
Sbjct:   42 TRKSSNDLSTVPSNGGKVQCMQVWPPLGKKKFETLSYLPPLSEESLLKEVQYLLNNGWVPCLEFEPTHGFVYREHGNTPGYYDGRYWTMWKLPMFGCTDPSQVVAELEEAKKAYP 156          

HSP 2 Score: 44.2838 bits (103), Expect = 2.461e-40
Identity = 25/37 (67.57%), Postives = 31/37 (83.78%), Query Frame = 1
Query:   61 LASSMISSTTVAT--ANRASLAQASMVAPFTGLKSSS 165
            +ASSM+S+  VAT  A+R++ AQASMVAPFTGLKS S
Sbjct:    1 MASSMLSNAAVATTAASRSAGAQASMVAPFTGLKSVS 37          
BLAST of EY702591 vs. ExPASy Swiss-Prot
Match: RBS3B_SOLLC (Ribulose bisphosphate carboxylase small chain 3B, chloroplastic OS=Solanum lycopersicum GN=RBCS-3B PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.209e-40
Identity = 68/115 (59.13%), Postives = 84/115 (73.04%), Query Frame = 3
Query:  180 TKKTNNDITSIASNGGRLQCMKVWPPTGLKKLETPSYLPPLADEALLKEITYLLRSGWIPCSEFQLEKGWVDREHPHSPRYYDGRYWTTAKPALYGRTDAAAGLNGVREGPREYP 524
            ++K N DITSIASNGGR+ CM+VWPP  +KK ET SYLP L+DE LL EI YLL++GW+PC EF+ E G+V RE+  SP YYDGRYWT  K  ++G TDA   L  V+E  + YP
Sbjct:   38 SRKQNLDITSIASNGGRVSCMQVWPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEFETEHGFVYRENHKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYP 152          

HSP 2 Score: 41.9726 bits (97), Expect = 3.209e-40
Identity = 23/35 (65.71%), Postives = 29/35 (82.86%), Query Frame = 1
Query:   61 LASSMISSTTVATANRASLAQASMVAPFTGLKSSS 165
            +ASS++SS  VAT  R + AQASMVAPFTGLKS++
Sbjct:    1 MASSIVSSAAVAT--RGNGAQASMVAPFTGLKSTA 33          
BLAST of EY702591 vs. ExPASy Swiss-Prot
Match: RBS3A_SOLLC (Ribulose bisphosphate carboxylase small chain 3A/3C, chloroplastic OS=Solanum lycopersicum GN=RBCS-3A/3C PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 5.448e-40
Identity = 68/115 (59.13%), Postives = 84/115 (73.04%), Query Frame = 3
Query:  180 TKKTNNDITSIASNGGRLQCMKVWPPTGLKKLETPSYLPPLADEALLKEITYLLRSGWIPCSEFQLEKGWVDREHPHSPRYYDGRYWTTAKPALYGRTDAAAGLNGVREGPREYP 524
            ++K N DITSIASNGGR+ CM+VWPP  +KK ET SYLP L+DE LL EI YLL++GW+PC EF+ E G+V RE+  SP YYDGRYWT  K  ++G TDA   L  V+E  + YP
Sbjct:   38 SRKQNLDITSIASNGGRVSCMQVWPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEFETEHGFVYRENHKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYP 152          

HSP 2 Score: 41.2022 bits (95), Expect = 5.448e-40
Identity = 23/35 (65.71%), Postives = 29/35 (82.86%), Query Frame = 1
Query:   61 LASSMISSTTVATANRASLAQASMVAPFTGLKSSS 165
            +ASS++SS  VAT  R + AQASMVAPFTGLKS++
Sbjct:    1 MASSVMSSAAVAT--RGNGAQASMVAPFTGLKSTA 33          
The following BLAST results are available for this feature:
BLAST of EY702591 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 104
Match NameE-valueIdentityDescription
RBS1_MESCR2.963e-4156.64Ribulose bisphosphate carboxylase small chain 1, c... [more]
RBS1_SOLLC2.965e-4160.34Ribulose bisphosphate carboxylase small chain 1, c... [more]
RBSB_SOLTU1.113e-4059.13Ribulose bisphosphate carboxylase small chain 2B, ... [more]
RBS_STELP1.451e-4059.13Ribulose bisphosphate carboxylase small chain, chl... [more]
RBSC_SOLTU1.890e-4059.13Ribulose bisphosphate carboxylase small chain 2C, ... [more]
RBSA_SOLTU1.890e-4059.13Ribulose bisphosphate carboxylase small chain 2A, ... [more]
RBS_CAPAN2.461e-4061.74Ribulose bisphosphate carboxylase small chain, chl... [more]
RBS6_MESCR2.461e-4053.04Ribulose bisphosphate carboxylase small chain 6, c... [more]
RBS3B_SOLLC3.209e-4059.13Ribulose bisphosphate carboxylase small chain 3B, ... [more]
RBS3A_SOLLC5.448e-4059.13Ribulose bisphosphate carboxylase small chain 3A/3... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-009-G11-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702591 ID=EY702591; Name=EY702591; organism=Citrus sinensis; type=EST; length=963bp
TAACCTCCAGTACCCGTCCCGGATTCCCTGCGCAACCCACCCCTCCGGGA
GCAAGTACCACTGGCTTCCTCAATGATCTCATCCACCACCGTTGCCACCG
CCAACCGCGCCAGCCTTGCTCAGGCCAGCATGGTCGCCCCCTTCACCGGC
CTCAAGTCTTCTTCTGGTGGGGGGCGGGAACCAAGAAGACCAACAATGAC
ATTACTTCCATTGCAAGCAACGGCGGAAGACTCCAATGCATGAAGGTGTG
GCCACCAACTGGCTTGAAGAAGCTCGAGACTCCCTCATACCTCCCGCCAC
TGGCCGATGAAGCTCTGCTCAAGGAAATCACCTACCTTCTCCGCTCCGGC
TGGATTCCCTGCTCGGAATTCCAGTTGGAGAAAGGGTGGGTGGACCGCGA
GCACCCACACTCACCACGATACTACGATGGACGCTACTGGACAACGGCGA
AGCCTGCCCTGTATGGGCGCACAGATGCAGCCGCAGGCTTGAACGGGGTG
CGGGAGGGCCCGAGGGAATACCCCCCCCATTCCCCCGAACTAGCGGATTC
GACCACAACCCGCCCCGGGCCGCCGATCATTCTTCCTTGCCTGCAAGCCA
CCAGGCGCCAAGGGACCCCAATAAACTTGCGCATCCCCCCCCGGCCCCAG
CGGCCCGCCACGAGTAAGGGGACACCCCCCCAAAGACTCACTTCTAACCA
ATGGGGGGCCCCTATTCGCGGCTTAGTTCCGGGTTCCGCGCGGCGTGGGG
CCCGCTGCCCCAACCCTCTTCGGCTCTTTCACCCAACCTCACGCTTCATT
CCTTTCCACCTCAACATCTAAAAACTGCAATGGTTTGGCCCCACCCCCCT
CCTGGCCGCGGCCGGCGGCGGGGACCCCCCACCCGAGGGAGGATCCCGGG
GTAAATAGAACATCGGCTTGGGAACCACCCAAACACAAGAAGGGGCGGCC
CCCTTCAGGCGCC
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