DY305587

Overview
NameDY305587
Unique NameDY305587
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1255
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305587 vs. ExPASy Swiss-Prot
Match: D2HDH_DANRE (D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Danio rerio GN=d2hgdh PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.025e-18
Identity = 76/277 (27.44%), Postives = 130/277 (46.93%), Query Frame = 3
Query:   72 LNEYLEPYGLFFPLDPGPGAT--IGGMCATRCSGSLAVRYGTMRDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKIPQHSVVATCNFPTIKDAADV-AIATMLSGIQVSRVELLDE--VQVRAVNIANGKNLPELP-TLMFEFIGTQAYSHEQTL--IVQKIVSEHNGTDFIFAEDPEAKKELWKMRKEALWACFAMEPSFEAMISDVCVPLSCLAELISRSKKELDASPLICTVIAHARDGNFSHGELFDPNQ 878
            L+ YLE      PLD G   +  IGG  +T   G   +RYG++R  V+ L+VVLA+G V+   +  RK   GYDL +L IGSEGTLG+IT V++   + P+   VA     + +   +       + G  +S  E LD   + +   ++     + E P  ++ E  G+ A   E+ L   ++++++    TD   A +    K LW +R+    A      +++    D+ +P+  + +L+   ++ L           H  DGN  H  +  P++
Sbjct:  188 LSHYLEERDFIMPLDLGAKGSCHIGGNVSTNAGGLRLLRYGSLRGTVLGLEVVLADGHVLNCLATLRKDNTGYDLKQLFIGSEGTLGVITAVSILCPRKPKAVNVAFLGCSSFQQLLETFQCCRGMLGEILSAFEFLDASCMNLLEKHLKLTNPITECPFYIVIETAGSNATHDEEKLHQFLEEVMTSSLVTDGTVATEATKIKALWSLRERVTEALTHEGYTYK---YDISLPVEKIYDLVQDMRRHLGGMAKNVVGYGHVGDGNL-HLNITSPSK 460          
BLAST of DY305587 vs. ExPASy Swiss-Prot
Match: D2HDH_HUMAN (D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Homo sapiens GN=D2HGDH PE=1 SV=3)

HSP 1 Score: 90.5077 bits (223), Expect = 2.238e-17
Identity = 84/300 (28.00%), Postives = 131/300 (43.67%), Query Frame = 3
Query:    9 VKALHIEDMDVVVEPGIGWMELNEYLEPYGLFFPLDPGPGAT--IGGMCATRCSGSLAVRYGTMRDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKIPQHSVVATCNFPTIKDAADV-AIATMLSGIQVSRVELLDEVQVRAV--NIANGKNLPELP-TLMFEFIGTQAYSHEQTL--IVQKIVSEHNGTDFIFAEDPEAKKELWKMRKEALWACFAMEPSFEAMISDVCVPLSCLAELISRSKKELDASPLICTVIAHARDGNFS---HGELFDPN 875
            V + H     +V + G    EL+ Y+E      PLD G   +  IGG  AT   G   +RYG++   V+ L+VVLA+G V+   +  RK   GYDL +L IGSEGTLGIIT V++     P+   VA    P   +     +    + G  +S  E +D V ++ V  ++     + E P  ++ E  G+ A    + L   ++  +     TD   A D    K LW +R+       A+         D+ +P+  L ++++  +  L           H  DGN       E F P+
Sbjct:  156 VLSFHSVSGILVCQAGCVLEELSRYVEERDFIMPLDLGAKGSCHIGGNVATNAGGLRFLRYGSLHGTVLGLEVVLADGTVLDCLTSLRKDNTGYDLKQLFIGSEGTLGIITTVSILCPPKPRAVNVAFLGCPGFAEVLQTFSTCKGMLGEILSAFEFMDAVCMQLVGRHLHLASPVQESPFYVLIETSGSNAGHDAEKLGHFLEHALGSGLVTDGTMATDQRKVKMLWALRER---ITEALSRDGYVYKYDLSLPVERLYDIVTDLRARLGPHAKHVVGYGHLGDGNLHLNVTAEAFSPS 452          
BLAST of DY305587 vs. ExPASy Swiss-Prot
Match: D2HDH_MOUSE (D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Mus musculus GN=D2hgdh PE=2 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 8.506e-17
Identity = 76/277 (27.44%), Postives = 128/277 (46.21%), Query Frame = 3
Query:   39 VVVEPGIGWMELNEYLEPYGLFFPLDPGPGAT--IGGMCATRCSGSLAVRYGTMRDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKIPQHSVVATCNFPTIKDAADV-AIATMLSGIQVSRVELLDE--VQVRAVNIANGKNLPELP-TLMFEFIGTQA--YSHEQTLIVQKIVSEHNGTDFIFAEDPEAKKELWKMRKEALWACFAMEPSFEAMISDVCVPLSCLAELISRSKKELDASPLICTVIAHARDGN 845
            +V + G    EL+ Y++      PLD G   +  IGG  AT   G   +RYG++R  V+ L+VVLA+G ++   +  RK   GYDL ++ IGSEGTLG+IT V++     P+   VA    P   +          + G  +S  E +D   +Q+   ++     + E P  ++ E  G+ A   + + T +++++++    TD   A D    + LW +R+    A       F+    D+ +P+  L +L+   +  L           H  DGN
Sbjct:  180 LVCQAGCVLEELSRYVQERDFIMPLDLGAKGSCHIGGNVATNAGGLRFLRYGSLRGTVLGLEVVLADGTILNCLTSLRKDNTGYDLKQMFIGSEGTLGVITAVSIVCPPRPKAVNVAFLGCPGFAEVLQTFRTCRGMLGEILSAFEFMDTECMQLVGQHLQLTNPVQESPFYVLVETSGSSAGHDAEKLTNVLEQVLNSGLVTDGTMATDQRKVQMLWALRERITEALSRDGYVFK---YDLSLPVERLYDLVIDLRTRLGPRAKHVVGYGHLGDGN 453          
BLAST of DY305587 vs. ExPASy Swiss-Prot
Match: D2HDH_RAT (D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus GN=D2hgdh PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.228e-15
Identity = 74/280 (26.43%), Postives = 126/280 (45.00%), Query Frame = 3
Query:   39 VVVEPGIGWMELNEYLEPYGLFFPLDPGPGAT--IGGMCATRCSGSLAVRYGTMRDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKIPQHSVVATCNFPTIKDAADV------AIATMLSGIQVSRVELLDEVQVRAVNIANGKNLPELP-TLMFEFIGTQA--YSHEQTLIVQKIVSEHNGTDFIFAEDPEAKKELWKMRKEALWACFAMEPSFEAMISDVCVPLSCLAELISRSKKELDASPLICTVIAHARDGN 845
            +V + G    EL+ Y++      PLD G   +  IGG  AT   G   +RYG++R  V+ L+VVLA+G ++   +  RK   GYDL ++ IGSEGTLG+IT V++     P+   VA    P   +           +  +LS  +    E +   Q+   ++     + E P  ++ E  G+ A   + + T +++++++     D   A D    + LW +R+    A       F+    D+ +P+  L +L+   +  L           H  DGN
Sbjct:  180 LVCQAGCVLEELSRYVQERDFIMPLDLGAKGSCHIGGNVATNAGGLRFLRYGSLRGTVLGLEVVLADGTILNCLTSLRKDNTGYDLKQMFIGSEGTLGVITAVSIVCPPRPKAVNVAFLGCPGFTEVLQTFRTCKGQLGEILSAFEFMDAECM---QLVGQHLHLTNPVQESPFYVLVETSGSSAGHDAEKLTNVLEQVLNSGLVIDGTMATDQRKVQMLWALRERITEALSRDGYVFK---YDLSLPVERLYDLVIDLRTRLGPRAKHVVGYGHLGDGN 453          
BLAST of DY305587 vs. ExPASy Swiss-Prot
Match: DLD3_YEAST (D-lactate dehydrogenase [cytochrome] 3 OS=Saccharomyces cerevisiae GN=DLD3 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 8.802e-14
Identity = 73/274 (26.64%), Postives = 126/274 (45.99%), Query Frame = 3
Query:   48 EPGIGWMELNEYLEPYGLFFPLD--PGPGATIGGMCATRCSGSLAVRYGTMRDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKIPQ---HSVVATCNFPTIKDAADVAIATMLSGIQVSRVELLDEVQVRAVNIANGKNLPELPT-------LMFEFIGTQAYSHEQTLIV-------QKIVSEHNGTDFIFAEDPEAKKELWKMRKEALWACFAMEPSFEAMISDVCVPLSCLAELISRSKKELDASPLI 812
            + G+   + +++L  +   FPLD        +GG+ +T   G   +RYG++  NV+ L+VVL NG+++   +  RK   GYDL +L IG+EGT+G++T V++     P+          NF T++    V   + LS I +S  E +D   +    I   K+LP  P        ++ E  G+     ++ L          K++SE      + A+D      LW  RK    AC +    ++    D+ + L  L  + +   + L+A+ LI
Sbjct:  137 DAGVVMRDAHQFLHDHDHIFPLDLPSRNNCQVGGVVSTNAGGLNFLRYGSLHGNVLGLEVVLPNGEIISNINALRKDNTGYDLKQLFIGAEGTIGVVTGVSIVAAAKPKALNAVFFGIENFDTVQKLF-VKAKSELSEI-LSAFEFMDRGSIEC-TIEYLKDLP-FPLENQHNFYVLIETSGSNKRHDDEKLTAFLKDTTDSKLISEG-----MMAKDKADFDRLWTWRKSVPTACNSYGGMYK---YDMSLQLKDLYSVSAAVTERLNAAGLI 398          
BLAST of DY305587 vs. ExPASy Swiss-Prot
Match: ADAS_DROME (Alkyldihydroxyacetonephosphate synthase OS=Drosophila melanogaster GN=CG10253 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.271e-12
Identity = 51/158 (32.28%), Postives = 77/158 (48.73%), Query Frame = 3
Query:   18 LHIEDMDVVVEPGIGWMELNEYLEPYGLFFPLDPGPG--ATIGGMCATRCSGSLAVRYGTMRDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKIPQHSVVATCNFPTIKDAADVAIATMLSGIQVSRVELLDEVQ 485
            L+ E++ V  E GI   +L   L   GL    +P     +T+GG  ATR SG     YG + D V+ +++V  +G + +  S  R S  G D   +I+GSEGTLG+ITEV L+++ +P      +  FP  +              Q + V L+D  Q
Sbjct:  222 LNRENLTVCFESGIVGQDLERVLRSEGLTVGHEPDSYEFSTLGGWVATRASGMKKNVYGNIEDLVVRVRMVTPSGTLERECSAPRVSC-GPDFNHVILGSEGTLGVITEVVLKVRPLPSLRRYGSLAFPNFEQGVLFMREVARRRCQPASVRLMDNEQ 378          
BLAST of DY305587 vs. ExPASy Swiss-Prot
Match: ADAS_HUMAN (Alkyldihydroxyacetonephosphate synthase, peroxisomal OS=Homo sapiens GN=AGPS PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.168e-12
Identity = 43/123 (34.96%), Postives = 67/123 (54.47%), Query Frame = 3
Query:   45 VEPGIGWMELNEYLEPYGLFFPLDPGP--GATIGGMCATRCSGSLAVRYGTMRDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKIPQHSVVATCNFPTIK 407
            VE GI   EL   L+  G     +P     +T+GG  +TR SG     YG + D V+++K+V   G + K+    R S  G D+   I+GSEGTLG+ITE T++++ +P++    +  FP  +
Sbjct:  278 VEAGITGQELERQLKESGYCTGHEPDSLEFSTVGGWVSTRASGMKKNIYGNIEDLVVHIKMVTPRGIIEKSCQGPRMST-GPDIHHFIMGSEGTLGVITEATIKIRPVPEYQKYGSVAFPNFE 399          
BLAST of DY305587 vs. ExPASy Swiss-Prot
Match: ADAS_CAVPO (Alkyldihydroxyacetonephosphate synthase, peroxisomal OS=Cavia porcellus GN=AGPS PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.832e-12
Identity = 44/123 (35.77%), Postives = 66/123 (53.66%), Query Frame = 3
Query:   45 VEPGIGWMELNEYLEPYGLFFPLDPGP--GATIGGMCATRCSGSLAVRYGTMRDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKIPQHSVVATCNFPTIK 407
            VE GI   EL   L+  G     +P     +T+GG  +TR SG     YG + D V+++KVV   G + K+    R S  G D+   I+GSEGTLG+ITE T++++  P++    +  FP  +
Sbjct:  278 VEAGITGQELERQLKESGYCTGHEPDSLEFSTVGGWISTRASGMKKNIYGNIEDLVVHMKVVTPRGVIEKSCQGPRMST-GPDIHHFIMGSEGTLGVITEATIKIRPTPEYQKYGSVAFPNFE 399          
BLAST of DY305587 vs. ExPASy Swiss-Prot
Match: ADAS_TRYBB (Alkyldihydroxyacetonephosphate synthase OS=Trypanosoma brucei brucei PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 4.830e-12
Identity = 50/164 (30.49%), Postives = 82/164 (50.00%), Query Frame = 3
Query:   12 KALHI--EDMDVVVEPGIGWMELNEYLEPYGLFFPLDPGPGA--TIGGMCATRCSGSLAVRYGTMRDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKIPQHSVVATCNFPTIKDAADVAIATMLSGIQVSRVELLDEVQVR 491
            + LHI  E    V E G+   +++E L  YG     DP   A  T+GG  A R SG+++ +YG + + ++ ++VV   G VV+T   +R    G DL  + +GSEG  G++TE  ++++++P+        FP+ + A          GI    + L DE   R
Sbjct:  190 RMLHIDTESGTAVFEVGVLGPDIDEQLSRYGFMMGHDPDSYAYSTLGGWIAARGSGAMSNKYGDIENMILAMRVVTPVG-VVETPLTSRP--CGVDLNAMFVGSEGAFGLVTEAVVKIERLPEVKRYEGWLFPSFEVAFTAFHTCTRKGIHPCTMRLYDEDDTR 350          
BLAST of DY305587 vs. ExPASy Swiss-Prot
Match: ADAS_MOUSE (Alkyldihydroxyacetonephosphate synthase, peroxisomal OS=Mus musculus GN=Agps PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 4.830e-12
Identity = 41/123 (33.33%), Postives = 69/123 (56.10%), Query Frame = 3
Query:   45 VEPGIGWMELNEYLEPYGLFFPLDPGP--GATIGGMCATRCSGSLAVRYGTMRDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKIPQHSVVATCNFPTIK 407
            VE GI   +L   L+  G     +P     +T+GG  +TR SG     YG + D V+++K+V   G V++ +S+  + + G D+   I+GSEGTLG+ITE T++++  P++    +  FP  +
Sbjct:  265 VEAGITGQDLERQLKESGYCTGHEPDSLEFSTVGGWISTRASGMKKNIYGNIEDLVVHMKMVTPRG-VIEKSSQGPRMSTGPDIHHFIMGSEGTLGVITEATIKIRPTPEYQKYGSVAFPNFE 386          
The following BLAST results are available for this feature:
BLAST of DY305587 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
D2HDH_DANRE2.025e-1827.44D-2-hydroxyglutarate dehydrogenase, mitochondrial ... [more]
D2HDH_HUMAN2.238e-1728.00D-2-hydroxyglutarate dehydrogenase, mitochondrial ... [more]
D2HDH_MOUSE8.506e-1727.44D-2-hydroxyglutarate dehydrogenase, mitochondrial ... [more]
D2HDH_RAT1.228e-1526.43D-2-hydroxyglutarate dehydrogenase, mitochondrial ... [more]
DLD3_YEAST8.802e-1426.64D-lactate dehydrogenase [cytochrome] 3 OS=Saccharo... [more]
ADAS_DROME1.271e-1232.28Alkyldihydroxyacetonephosphate synthase OS=Drosoph... [more]
ADAS_HUMAN2.168e-1234.96Alkyldihydroxyacetonephosphate synthase, peroxisom... [more]
ADAS_CAVPO2.832e-1235.77Alkyldihydroxyacetonephosphate synthase, peroxisom... [more]
ADAS_TRYBB4.830e-1230.49Alkyldihydroxyacetonephosphate synthase OS=Trypano... [more]
ADAS_MOUSE4.830e-1233.33Alkyldihydroxyacetonephosphate synthase, peroxisom... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1CC02RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305587 ID=DY305587; Name=DY305587; organism=Citrus sinensis; type=EST; length=1255bp
GGAAAAGTGTTAAAGCATTACATATTGAGGACATGGATGTGGTTGTTGAG
CCTGGGATTGGATGGATGGAGCTTAATGAATACTTGGAGCCATATGGGTT
ATTCTTCCCTCTTGATCCTGGGCCTGGTGCAACCATTGGGGGTATGTGTG
CTACCCGCTGCTCTGGTTCCTTGGCTGTGAGGTATGGAACTATGCGCGAC
AATGTCATTAATCTGAAGGTAGTTCTTGCCAATGGAGATGTTGTTAAGAC
AGCTTCTCGTGCTCGAAAAAGTGCTGCAGGGTATGATTTGACCCGACTGA
TAATTGGAAGTGAGGGAACCCTTGGCATAATAACAGAAGTCACTCTAAGG
CTTCAGAAAATTCCACAGCATTCAGTGGTGGCAACATGTAACTTCCCAAC
TATTAAGGATGCAGCAGATGTAGCTATTGCTACTATGCTGTCTGGCATAC
AGGTGTCAAGGGTGGAGCTCCTGGATGAAGTTCAAGTGAGGGCTGTCAAT
ATTGCTAATGGGAAGAACTTGCCTGAACTTCCAACTTTGATGTTTGAATT
TATAGGCACTCAGGCATATTCACATGAGCAGACACTAATTGTTCAGAAGA
TTGTGTCTGAGCACAATGGTACTGATTTTATTTTTGCGGAAGATCCTGAA
GCTAAAAAGGAACTCTGGAAGATGAGAAAGGAGGCACTCTGGGCTTGCTT
TGCAATGGAGCCGAGTTTTGAAGCAATGATTTCTGATGTATGTGTTCCTC
TTTCTTGCCTGGCAGAATTGATATCAAGGTCCAAGAAAGAGCTTGATGCA
TCACCACTGATTTGCACTGTAATTGCTCATGCCCGTGATGGTAACTTTTC
CCACGGTGAACTATTTGATCCGAACCAAAAAAAGGAACGCAGAAAACCGA
ACGGTTAAATCGAATCATGGTCCCAACTGCCCTTGCCATGGAAGGAACTG
TAACTGTGAGCATGGATTTGGGACAGGAAAAAGAAATATCCAAAAAAGAA
CTAGGCCCTGAACCTTTGGAAAAAAAAAAAAAACAAAATACCCCTAAACC
CCCACAACTTCCTAAAATTCGGAAAGAGATATTCCCCCCATATTTGTTTT
CAAAATTTTTTTGGCAAAATTGGGTTCCAAAGGGAGTAAAACCTTCCCAC
ACGCGCCTCTTTTTTGGAAAAGAAATTTATAGAATCTTTATGGAGAAGAT
ATATCTTAACCCCCCCTCCTGTGGGGGGCGTCTTTAATTAAAAAAAATTA
ATAAA
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