DY305585

Overview
NameDY305585
Unique NameDY305585
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1188
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305585 vs. ExPASy Swiss-Prot
Match: ATG8A_ARATH (Autophagy-related protein 8a OS=Arabidopsis thaliana GN=ATG8A PE=1 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 1.711e-27
Identity = 58/77 (75.32%), Postives = 67/77 (87.01%), Query Frame = 1
Query:  673 SSLPECENYRYLVPADLTVXQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYKEKKDEDGFLYVTYSGENTF 903
            S +P+ +  +YLVPADLTV QFVYV+RKRIKL AEKAIF+FV N LPPT A+MSAIY+E KDEDGFLY+TYSGENTF
Sbjct:   40 SDVPDIDKKKYLVPADLTVGQFVYVVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTF 116          
BLAST of DY305585 vs. ExPASy Swiss-Prot
Match: ATG8B_ARATH (Autophagy-related protein 8b OS=Arabidopsis thaliana GN=ATG8B PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 2.235e-27
Identity = 57/77 (74.03%), Postives = 67/77 (87.01%), Query Frame = 1
Query:  673 SSLPECENYRYLVPADLTVXQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYKEKKDEDGFLYVTYSGENTF 903
            S +P+ +  +YLVPADLT+ QFVYV+RKRIKL AEKAIF+FV N LPPT A+MSAIY+E KDEDGFLY+TYSGENTF
Sbjct:   40 SDVPDIDKKKYLVPADLTIGQFVYVVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTF 116          
BLAST of DY305585 vs. ExPASy Swiss-Prot
Match: ATG8_PHYIN (Autophagy-related protein 8 OS=Phytophthora infestans GN=ATG8 PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 2.919e-27
Identity = 58/77 (75.32%), Postives = 68/77 (88.31%), Query Frame = 1
Query:  673 SSLPECENYRYLVPADLTVXQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYKEKKDEDGFLYVTYSGENTF 903
            S +P+ +  +YLVPADLTV QFVYVIRKRIKLS EKAIFIF++NVLPPT A+MS IY+E+KD DGFLY+TYSGENTF
Sbjct:   38 SDIPDIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFINNVLPPTAALMSNIYEEQKDVDGFLYITYSGENTF 114          
BLAST of DY305585 vs. ExPASy Swiss-Prot
Match: ATG8A_ORYSJ (Autophagy-related protein 8A OS=Oryza sativa subsp. japonica GN=ATG8A PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 3.812e-27
Identity = 57/77 (74.03%), Postives = 67/77 (87.01%), Query Frame = 1
Query:  673 SSLPECENYRYLVPADLTVXQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYKEKKDEDGFLYVTYSGENTF 903
            + +PE +  +YLVPADLTV QFVYV+RKRIKLS EKAIF+FV N LPPT ++MSAIY+E KDEDGFLY+TYSGENTF
Sbjct:   40 TDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFVFVKNTLPPTASLMSAIYEENKDEDGFLYMTYSGENTF 116          
BLAST of DY305585 vs. ExPASy Swiss-Prot
Match: ATG8A_ORYSI (Autophagy-related protein 8A OS=Oryza sativa subsp. indica GN=ATG8A PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 3.812e-27
Identity = 57/77 (74.03%), Postives = 67/77 (87.01%), Query Frame = 1
Query:  673 SSLPECENYRYLVPADLTVXQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYKEKKDEDGFLYVTYSGENTF 903
            + +PE +  +YLVPADLTV QFVYV+RKRIKLS EKAIF+FV N LPPT ++MSAIY+E KDEDGFLY+TYSGENTF
Sbjct:   40 TDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFVFVKNTLPPTASLMSAIYEENKDEDGFLYMTYSGENTF 116          
BLAST of DY305585 vs. ExPASy Swiss-Prot
Match: ATG8_PODAN (Autophagy-related protein 8 OS=Podospora anserina GN=ATG8 PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 6.503e-27
Identity = 59/77 (76.62%), Postives = 66/77 (85.71%), Query Frame = 1
Query:  673 SSLPECENYRYLVPADLTVXQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYKEKKDEDGFLYVTYSGENTF 903
            S +   +  +YLVPADLTV QFVYVIRKRIKLS EKAIFIFVD VLPPT A+MS+IY+E KDEDGFLY+TYSGENTF
Sbjct:   39 SDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTF 115          
BLAST of DY305585 vs. ExPASy Swiss-Prot
Match: ATG8_PHANO (Autophagy-related protein 8 OS=Phaeosphaeria nodorum GN=ATG8 PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 6.503e-27
Identity = 59/77 (76.62%), Postives = 66/77 (85.71%), Query Frame = 1
Query:  673 SSLPECENYRYLVPADLTVXQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYKEKKDEDGFLYVTYSGENTF 903
            S +   +  +YLVPADLTV QFVYVIRKRIKLS EKAIFIFVD VLPPT A+MS+IY+E KDEDGFLY+TYSGENTF
Sbjct:   39 SDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTF 115          
BLAST of DY305585 vs. ExPASy Swiss-Prot
Match: ATG8_PENCW (Autophagy-related protein 8 OS=Penicillium chrysogenum (strain ATCC 28089 / DSM 1075 / Wisconsin 54-1255) GN=atg8 PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 6.503e-27
Identity = 59/77 (76.62%), Postives = 66/77 (85.71%), Query Frame = 1
Query:  673 SSLPECENYRYLVPADLTVXQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYKEKKDEDGFLYVTYSGENTF 903
            S +   +  +YLVPADLTV QFVYVIRKRIKLS EKAIFIFVD VLPPT A+MS+IY+E KDEDGFLY+TYSGENTF
Sbjct:   39 SDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTF 115          
BLAST of DY305585 vs. ExPASy Swiss-Prot
Match: ATG8_NEUCR (Autophagy-related protein 8 OS=Neurospora crassa GN=atg-8 PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 6.503e-27
Identity = 59/77 (76.62%), Postives = 66/77 (85.71%), Query Frame = 1
Query:  673 SSLPECENYRYLVPADLTVXQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYKEKKDEDGFLYVTYSGENTF 903
            S +   +  +YLVPADLTV QFVYVIRKRIKLS EKAIFIFVD VLPPT A+MS+IY+E KDEDGFLY+TYSGENTF
Sbjct:   39 SDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTF 115          
BLAST of DY305585 vs. ExPASy Swiss-Prot
Match: ATG8_NEOFI (Autophagy-related protein 8 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=atg8 PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 6.503e-27
Identity = 59/77 (76.62%), Postives = 66/77 (85.71%), Query Frame = 1
Query:  673 SSLPECENYRYLVPADLTVXQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYKEKKDEDGFLYVTYSGENTF 903
            S +   +  +YLVPADLTV QFVYVIRKRIKLS EKAIFIFVD VLPPT A+MS+IY+E KDEDGFLY+TYSGENTF
Sbjct:   39 SDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTF 115          
The following BLAST results are available for this feature:
BLAST of DY305585 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 73
Match NameE-valueIdentityDescription
ATG8A_ARATH1.711e-2775.32Autophagy-related protein 8a OS=Arabidopsis thalia... [more]
ATG8B_ARATH2.235e-2774.03Autophagy-related protein 8b OS=Arabidopsis thalia... [more]
ATG8_PHYIN2.919e-2775.32Autophagy-related protein 8 OS=Phytophthora infest... [more]
ATG8A_ORYSJ3.812e-2774.03Autophagy-related protein 8A OS=Oryza sativa subsp... [more]
ATG8A_ORYSI3.812e-2774.03Autophagy-related protein 8A OS=Oryza sativa subsp... [more]
ATG8_PODAN6.503e-2776.62Autophagy-related protein 8 OS=Podospora anserina ... [more]
ATG8_PHANO6.503e-2776.62Autophagy-related protein 8 OS=Phaeosphaeria nodor... [more]
ATG8_PENCW6.503e-2776.62Autophagy-related protein 8 OS=Penicillium chrysog... [more]
ATG8_NEUCR6.503e-2776.62Autophagy-related protein 8 OS=Neurospora crassa G... [more]
ATG8_NEOFI6.503e-2776.62Autophagy-related protein 8 OS=Neosartorya fischer... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1CB11RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305585 ID=DY305585; Name=DY305585; organism=Citrus sinensis; type=EST; length=1188bp
GATTAACACTTGAGCTGCATTATTTGAAACAATTCTTGGTAGCAATCTCA
TCAACTTTACGTAGCACTCTCATTCCTTTCTTTTCTAAGGTATATTGATC
TCATTCCTCTGTGGTAAGGGGCAGCCAGCAGAGTATGGCAACCTCTTACT
TGTGCTACTTTGTTTGTAATATTACCATAGTTTTCATTGTTATCTTATAT
TGTTCTTCCTGTTTCATTTAGCTGATCACATGGCTCTGTCATGTGAGTCT
GCATACATCCTATGACAGCTTCTTGCAGCTATTTTCTTTGTGGGTCTTGC
TAGCTTACAGTTTTTGTATATTACAGCCCATAAAGAAGGGGCGTTAACTG
GCCCTCATCCAGTTACCCCTTTTGGCCTGGCTGTACATTACAGTAAATGT
AAGGTAGCCATGTCTTTTTTCCATTTTTTTCCTTTATATTTGAGATTAAA
ACCTAAGACCTAATCAAAATTTAGTCATTCATTTGTTTACCTGATAATCA
TCATATCTATTACTTCTTTTTCTTTGTCGCATTTCTTTGAAAGATCATTG
TATTTGTAGAATTGGCTGTCGCTTCAGTGTTTATAGTTGCTATCATTGCT
GACAGATGGTAATTTAAATGTCCATATGGACTATAACAACTCGCTACTTG
ATTCTATCATACTAATAAGGTTTCCTCTTTACCTGAATGTGAAAATTACA
GGTATCTTGTTCCAGCTGACCTGACTGTANGACAATTTGTCTATGTCATC
CGTAAAAGGATCAAACTGAGTGCTGAAAAGGCGATATTTATTTTTGTGGA
TAATGTGCTCCCACCTACAGGTGCAATTATGTCTGCCATATACAAGGAAA
AAAAGGATGAAGATGGTTTTCTTTATGTGACTTACAGTGGGGAGAACACA
TTTGAAACCACATCCCAGTTTACCCTTGGAATATTATTCGCCTCTTGTGT
GGGTTCCTGTGGCGACCACATTTTATCTTATTAACATCCTTGCTTTCCGC
CTATAATTCCTTTATCGGGCAAATTTATTATTTAAAAAAAAATGGCCCGT
AAAAAATGAACGGTTACTAATGTTAATAAATTCTAAAGGCAAAAAAATGA
CAAATTCTTTCTTCCCTTTCCTTTTTTAAAAAATTTTTTTTTCGGTTTGG
GGATTTTTTCGGGGGGGTTTCCATCCTGGAATATAATT
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