DY305585

Overview
NameDY305585
Unique NameDY305585
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1188
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305585 vs. ExPASy Swiss-Prot
Match: ATG8_ASHGO (Autophagy-related protein 8 OS=Ashbya gossypii GN=ATG8 PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 9.390e-26
Identity = 56/77 (72.73%), Postives = 66/77 (85.71%), Query Frame = 1
Query:  673 SSLPECENYRYLVPADLTVXQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYKEKKDEDGFLYVTYSGENTF 903
            S +PE +  +YLVPADLTV QFVYVIR+RIKL AEKAIFIFV++ LPPT A+M A+Y+E KD+DGFLYV YSGENTF
Sbjct:   38 SDIPEVDRRKYLVPADLTVGQFVYVIRRRIKLPAEKAIFIFVNDTLPPTAALMFAVYQEHKDKDGFLYVKYSGENTF 114          
BLAST of DY305585 vs. ExPASy Swiss-Prot
Match: ATG8_LODEL (Autophagy-related protein 8 OS=Lodderomyces elongisporus GN=ATG8 PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 1.226e-25
Identity = 55/77 (71.43%), Postives = 66/77 (85.71%), Query Frame = 1
Query:  673 SSLPECENYRYLVPADLTVXQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYKEKKDEDGFLYVTYSGENTF 903
            S +PE +  +YLVP DLTV QFVYVIRKRIKL +EKAIFIFV+++LPPT A++S IY+E KD+DGFLYV YSGENTF
Sbjct:   39 SDIPEIDKRKYLVPVDLTVGQFVYVIRKRIKLPSEKAIFIFVNDILPPTAALISTIYEEHKDDDGFLYVLYSGENTF 115          
BLAST of DY305585 vs. ExPASy Swiss-Prot
Match: ATG8_PICST (Autophagy-related protein 8 OS=Pichia stipitis GN=ATG8 PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.602e-25
Identity = 55/77 (71.43%), Postives = 66/77 (85.71%), Query Frame = 1
Query:  673 SSLPECENYRYLVPADLTVXQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYKEKKDEDGFLYVTYSGENTF 903
            S +PE +  +YLVP DL+V QFVYVIRKRIKL +EKAIFIFV+++LPPT A++S IY+E KDEDGFLYV YSGENTF
Sbjct:   39 SDIPEIDKRKYLVPVDLSVGQFVYVIRKRIKLPSEKAIFIFVNDILPPTAALISTIYEEHKDEDGFLYVLYSGENTF 115          
BLAST of DY305585 vs. ExPASy Swiss-Prot
Match: ATG8_DEBHA (Autophagy-related protein 8 OS=Debaryomyces hansenii GN=ATG8 PE=3 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 1.602e-25
Identity = 56/87 (64.37%), Postives = 68/87 (78.16%), Query Frame = 1
Query:  673 SSLPECENYRYLVPADLTVXQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYKEKKDEDGFLYVTYSGENTFETTSQFTLGI 933
            S + E +  +YLVP DL+V QFVYVIRKRIKL +EKAIFIF++++LPPT A+MS IY+E KDEDGFLYV YSGENTF  T    L +
Sbjct:   39 SDIQEIDKRKYLVPGDLSVGQFVYVIRKRIKLPSEKAIFIFINDILPPTAALMSTIYEEHKDEDGFLYVLYSGENTFGETEMKRLNV 125          
BLAST of DY305585 vs. ExPASy Swiss-Prot
Match: ATG8_CANGA (Autophagy-related protein 8 OS=Candida glabrata GN=ATG8 PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 2.732e-25
Identity = 55/77 (71.43%), Postives = 65/77 (84.42%), Query Frame = 1
Query:  673 SSLPECENYRYLVPADLTVXQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYKEKKDEDGFLYVTYSGENTF 903
            S +PE +  +YLVPADLTV QFVYVIRKRI L  EKAIFIFV++ LPPT ++MS +Y+E KD+DGFLYVTYSGENTF
Sbjct:   39 SDIPEVDKRKYLVPADLTVGQFVYVIRKRIMLPPEKAIFIFVNDTLPPTASLMSQVYQEHKDKDGFLYVTYSGENTF 115          
BLAST of DY305585 vs. ExPASy Swiss-Prot
Match: ATG8_PICAN (Autophagy-related protein 8 OS=Pichia angusta GN=ATG8 PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 3.568e-25
Identity = 53/77 (68.83%), Postives = 67/77 (87.01%), Query Frame = 1
Query:  673 SSLPECENYRYLVPADLTVXQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYKEKKDEDGFLYVTYSGENTF 903
            S +PE +  +YLVP+DLTV QFVYVIRKRI+L +EKAIFIFV+++LPPT ++MS IY++ KDEDGFLY+ YSGENTF
Sbjct:   39 SDIPEIDKRKYLVPSDLTVGQFVYVIRKRIQLPSEKAIFIFVNDILPPTASLMSTIYEQYKDEDGFLYILYSGENTF 115          
BLAST of DY305585 vs. ExPASy Swiss-Prot
Match: ATG8_KLULA (Autophagy-related protein 8 OS=Kluyveromyces lactis GN=ATG8 PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 3.568e-25
Identity = 55/84 (65.48%), Postives = 69/84 (82.14%), Query Frame = 1
Query:  673 SSLPECENYRYLVPADLTVXQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYKEKKDEDGFLYVTYSGENTFETTSQFT 924
            S +P+ +  +YLVP DLTV QFVYVIRKRIKL AEKAIFIFV++ LPPT A+MS+IY++ KD+DGFLYV+YS ENTF   + F+
Sbjct:   39 SDIPDIDKRKYLVPGDLTVGQFVYVIRKRIKLPAEKAIFIFVNDTLPPTAALMSSIYQQHKDKDGFLYVSYSSENTFGDDALFS 122          
BLAST of DY305585 vs. ExPASy Swiss-Prot
Match: ATG8_MAGGR (Autophagy-related protein 8 OS=Magnaporthe grisea GN=ATG8 PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 6.086e-25
Identity = 56/77 (72.73%), Postives = 64/77 (83.12%), Query Frame = 1
Query:  673 SSLPECENYRYLVPADLTVXQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYKEKKDEDGFLYVTYSGENTF 903
            S +   +  +YLVPADLTV QFVYVIRKRIKLS EKAIFIFV + LPPT A+MS+IY+  KDEDGFLY+TYSGENTF
Sbjct:   39 SDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVQDTLPPTAALMSSIYELHKDEDGFLYITYSGENTF 115          
BLAST of DY305585 vs. ExPASy Swiss-Prot
Match: ATG8_DICDI (Autophagy-related protein 8 OS=Dictyostelium discoideum GN=atg8 PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 8.226e-22
Identity = 49/78 (62.82%), Postives = 64/78 (82.05%), Query Frame = 1
Query:  673 SSLPECENYRYLVPADLTVXQFVYVIRKRI-KLSAEKAIFIFVDNVLPPTGAIMSAIYKEKKDEDGFLYVTYSGENTF 903
            S  P+ +  +YLVPAD+TV +FVY IRK + K+SAEKAI++FV+N +PPT A++S IY+  KDEDGFLY+TYSGENTF
Sbjct:   41 SDAPDIDKKKYLVPADITVGKFVYEIRKHMTKVSAEKAIYLFVNNTIPPTAALISQIYERYKDEDGFLYITYSGENTF 118          
BLAST of DY305585 vs. ExPASy Swiss-Prot
Match: GBRL2_RAT (Gamma-aminobutyric acid receptor-associated protein-like 2 OS=Rattus norvegicus GN=Gabarapl2 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.006e-19
Identity = 43/77 (55.84%), Postives = 61/77 (79.22%), Query Frame = 1
Query:  673 SSLPECENYRYLVPADLTVXQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYKEKKDEDGFLYVTYSGENTF 903
            S + + +  +YLVP+D+TV QF+++IRKRI+L +EKAIF+FVD  +P +   M  +Y+++KDEDGFLYV YSGENTF
Sbjct:   39 SQIVDIDKRKYLVPSDITVAQFMWIIRKRIQLPSEKAIFLFVDKTVPQSSLTMGQLYEKEKDEDGFLYVAYSGENTF 115          
The following BLAST results are available for this feature:
BLAST of DY305585 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 73
Match NameE-valueIdentityDescription
ATG8_ASHGO9.390e-2672.73Autophagy-related protein 8 OS=Ashbya gossypii GN=... [more]
ATG8_LODEL1.226e-2571.43Autophagy-related protein 8 OS=Lodderomyces elongi... [more]
ATG8_PICST1.602e-2571.43Autophagy-related protein 8 OS=Pichia stipitis GN=... [more]
ATG8_DEBHA1.602e-2564.37Autophagy-related protein 8 OS=Debaryomyces hansen... [more]
ATG8_CANGA2.732e-2571.43Autophagy-related protein 8 OS=Candida glabrata GN... [more]
ATG8_PICAN3.568e-2568.83Autophagy-related protein 8 OS=Pichia angusta GN=A... [more]
ATG8_KLULA3.568e-2565.48Autophagy-related protein 8 OS=Kluyveromyces lacti... [more]
ATG8_MAGGR6.086e-2572.73Autophagy-related protein 8 OS=Magnaporthe grisea ... [more]
ATG8_DICDI8.226e-2262.82Autophagy-related protein 8 OS=Dictyostelium disco... [more]
GBRL2_RAT1.006e-1955.84Gamma-aminobutyric acid receptor-associated protei... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1CB11RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305585 ID=DY305585; Name=DY305585; organism=Citrus sinensis; type=EST; length=1188bp
GATTAACACTTGAGCTGCATTATTTGAAACAATTCTTGGTAGCAATCTCA
TCAACTTTACGTAGCACTCTCATTCCTTTCTTTTCTAAGGTATATTGATC
TCATTCCTCTGTGGTAAGGGGCAGCCAGCAGAGTATGGCAACCTCTTACT
TGTGCTACTTTGTTTGTAATATTACCATAGTTTTCATTGTTATCTTATAT
TGTTCTTCCTGTTTCATTTAGCTGATCACATGGCTCTGTCATGTGAGTCT
GCATACATCCTATGACAGCTTCTTGCAGCTATTTTCTTTGTGGGTCTTGC
TAGCTTACAGTTTTTGTATATTACAGCCCATAAAGAAGGGGCGTTAACTG
GCCCTCATCCAGTTACCCCTTTTGGCCTGGCTGTACATTACAGTAAATGT
AAGGTAGCCATGTCTTTTTTCCATTTTTTTCCTTTATATTTGAGATTAAA
ACCTAAGACCTAATCAAAATTTAGTCATTCATTTGTTTACCTGATAATCA
TCATATCTATTACTTCTTTTTCTTTGTCGCATTTCTTTGAAAGATCATTG
TATTTGTAGAATTGGCTGTCGCTTCAGTGTTTATAGTTGCTATCATTGCT
GACAGATGGTAATTTAAATGTCCATATGGACTATAACAACTCGCTACTTG
ATTCTATCATACTAATAAGGTTTCCTCTTTACCTGAATGTGAAAATTACA
GGTATCTTGTTCCAGCTGACCTGACTGTANGACAATTTGTCTATGTCATC
CGTAAAAGGATCAAACTGAGTGCTGAAAAGGCGATATTTATTTTTGTGGA
TAATGTGCTCCCACCTACAGGTGCAATTATGTCTGCCATATACAAGGAAA
AAAAGGATGAAGATGGTTTTCTTTATGTGACTTACAGTGGGGAGAACACA
TTTGAAACCACATCCCAGTTTACCCTTGGAATATTATTCGCCTCTTGTGT
GGGTTCCTGTGGCGACCACATTTTATCTTATTAACATCCTTGCTTTCCGC
CTATAATTCCTTTATCGGGCAAATTTATTATTTAAAAAAAAATGGCCCGT
AAAAAATGAACGGTTACTAATGTTAATAAATTCTAAAGGCAAAAAAATGA
CAAATTCTTTCTTCCCTTTCCTTTTTTAAAAAATTTTTTTTTCGGTTTGG
GGATTTTTTCGGGGGGGTTTCCATCCTGGAATATAATT
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