DY305579

Overview
NameDY305579
Unique NameDY305579
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1234
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305579 vs. ExPASy Swiss-Prot
Match: ACCH3_SOLLC (1-aminocyclopropane-1-carboxylate oxidase homolog OS=Solanum lycopersicum GN=ACO3 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 1.058e-27
Identity = 73/198 (36.87%), Postives = 106/198 (53.54%), Query Frame = -1
Query:  197 PVGFSEISLEYCKRIRQVARELLKGISESLGLEFCYIERAMNLDSGLQILIANLYPPCPQPELAMGMPPHSDHGLLTLLTQNGICGLQLLHNGKWVNVNAVPNSFLVNTGDHIEILSNGKYKSVVHRAVVNNKMTRVSLAIANGPS---LDTVVEPSKELIERQSEAPAYIGIKYKDFLELQQSNQLDNKSVLDRVRV 781
            P    E  +++ K ++++   LL+ +SE LGL+  Y++  M  D        N YPPCPQPEL MG   H+D G +T+L Q+ + GLQ+LH   WV+V   P S +VN GD +++LSN KY SV HRA+ NN  +R+S+    G S      +  P  EL+  +   P Y     KD      +  LD  S L R ++
Sbjct:  169 PTPCGESLIDFSKDVKKLGFTLLELLSEGLGLDRSYLKDYM--DCFHLFCSCNYYPPCPQPELTMGTIQHTDIGFVTILLQDDMGGLQVLHQNHWVDVPPTPGSLVVNIGDFLQLLSNDKYLSVEHRAISNNVGSRMSITCFFGESPYQSSKLYGPITELLS-EDNPPKYRATTVKDHTSYLHNRGLDGTSALSRYKI 363          
BLAST of DY305579 vs. ExPASy Swiss-Prot
Match: ACCO2_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Solanum lycopersicum GN=ACO2 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.381e-27
Identity = 65/181 (35.91%), Postives = 111/181 (61.33%), Query Frame = -1
Query:  248 FSEISLEYCKRIRQVARELLKGISESLGLEFCYIERAMNLDSGLQI--LIANLYPPCPQPELAMGMPPHSDHGLLTLLTQNG-ICGLQLLHNGKWVNVNAVPNSFLVNTGDHIEILSNGKYKSVVHRAVVNNKMTRVSLAIANGPSLDTVVEPSKELIERQSE---APAYIGIKYKDFLEL 772
            + E+  ++ KR+ ++A ELL  + E+LGLE  Y++       G      ++N YPPCP+P+L  G+  H+D G + LL Q+  + GLQLL +G+W++V  + +S +VN GD +E+++NGKYKSV+HR +     TR+SLA    P  D ++ P+  L+++++E      Y    + D+++L
Sbjct:  110 YREVMRDFRKRLEKLAEELLDLLCENLGLEKSYLKNTFYGSKGPNFGTKVSN-YPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGRWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKDGTRMSLASFYNPGNDALIYPAPALVDKEAEEHNKQVYPKFMFDDYMKL 289          
BLAST of DY305579 vs. ExPASy Swiss-Prot
Match: ACCO4_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Solanum lycopersicum GN=ACO4 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.804e-27
Identity = 68/184 (36.96%), Postives = 110/184 (59.78%), Query Frame = -1
Query:  248 PNKPVGFSEISLEYCKRIRQVARELLKGISESLGLEFCYIERAMNLDSGLQI--LIANLYPPCPQPELAMGMPPHSDHGLLTLLTQNG-ICGLQLLHNGKWVNVNAVPNSFLVNTGDHIEILSNGKYKSVVHRAVVNNKMTRVSLAIANGPSLDTVVEPSKELIERQSEAPAYIGIKYKDFLEL 790
            P+    + E+  ++ KR+ ++A ELL  + E+LGLE  Y++ A     G      ++N YPPCP+P+L  G+  H+D G + LL Q+  + GLQLL + +W++V  + +S +VN GD +E+++NGKYKSV+HR +     TR+SLA    P  D V+ P+  LIE   +   Y    + D+++L
Sbjct:  104 PDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSN-YPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDEQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQTDGTRMSLASFYNPGNDAVIYPAPSLIEESKQ--VYPKFVFDDYMKL 284          
BLAST of DY305579 vs. ExPASy Swiss-Prot
Match: ACCO2_MALDO (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Malus domestica GN=ACO2 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.804e-27
Identity = 66/185 (35.68%), Postives = 113/185 (61.08%), Query Frame = -1
Query:  248 PNKPVGFSEISLEYCKRIRQVARELLKGISESLGLEFCYIERAMNLDSGLQI--LIANLYPPCPQPELAMGMPPHSDHGLLTLLTQNG-ICGLQLLHNGKWVNVNAVPNSFLVNTGDHIEILSNGKYKSVVHRAVVNNKMTRVSLAIANGPSLDTVVEPSKELIERQSE-APAYIGIKYKDFLEL 790
            P+    + +   E+   + ++A +LL  + E+LGLE  Y+++A     G      ++N YPPCP+P+L  G+  H+D G + LL Q+  + GLQLL +G+W++V  V +S ++N GD IE+++NGKYKS++HR +  +  TR+S+A    P  D  + P+  L+E +SE +P Y    + D+++L
Sbjct:  104 PDLEEDYRKTMKEFAVELEKLAEKLLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSN-YPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWMDVPPVHHSIVINLGDQIEVITNGKYKSIMHRVIAQSDGTRMSIASFYNPGDDAFISPAPALLEEKSEVSPTYPKFLFDDYMKL 287          
BLAST of DY305579 vs. ExPASy Swiss-Prot
Match: ACCO1_MALDO (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Malus domestica PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.804e-27
Identity = 65/173 (37.57%), Postives = 110/173 (63.58%), Query Frame = -1
Query:  248 EYCKRIRQVARELLKGISESLGLEFCYIERAMNLDSGLQI--LIANLYPPCPQPELAMGMPPHSDHGLLTLLTQNG-ICGLQLLHNGKWVNVNAVPNSFLVNTGDHIEILSNGKYKSVVHRAVVNNKMTRVSLAIANGPSLDTVVEPSKELIERQSE-APAYIGIKYKDFLEL 754
            E+   + ++A +LL  + E+LGLE  Y+++      G      ++N YPPCP+P+L  G+  HSD G + LL Q+  + GLQLL +G+WV+V  + +S ++N GD IE+++NGKYKSV+HR +  +  TR+S+A    P  D+ + P+  ++E+++E AP Y    + D+++L
Sbjct:  116 EFAVELEKLAEKLLDLLCENLGLEKGYLKKVFYGSKGPNFGTKVSN-YPPCPKPDLIKGLRAHSDAGGIILLFQDDKVSGLQLLKDGEWVDVPPMHHSIVINLGDQIEVITNGKYKSVMHRVIAQSDGTRMSIASFYNPGNDSFISPAPAVLEKKTEDAPTYPKFVFDDYMKL 287          
BLAST of DY305579 vs. ExPASy Swiss-Prot
Match: DV4H_CATRO (Deacetoxyvindoline 4-hydroxylase OS=Catharanthus roseus GN=D4H PE=1 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 2.356e-27
Identity = 70/197 (35.53%), Postives = 115/197 (58.38%), Query Frame = -1
Query:  197 EISLEYCKRIRQVARELLKGISESLGLEFCYIERAMNLDSGLQILIANLYPPCPQPELAMGMPPHSDHGLLTLLTQNGICGLQLLHNGKWVNVNAVPNSFLVNTGDHIEILSNGKYKSVVHRAVVNNKMTRVSLAIANGPSLDT-------VVEPSKELIERQSEAPAYIGIKYKDFLELQQSNQLDNKSVLDRVRV 766
            +I ++Y   +R +   L + +SE+LGL+  ++E  M+   GL IL+ + YP CPQPEL  G   HSD G LT+L Q+ I GLQ+L   +W++V  +P + ++N  D +++++N K+KSV HR + N    R+S+A+A G    T       +  P KELI  ++  P Y  +  KDF+ ++ + + D+ S L   R+
Sbjct:  206 DILMKYSNYVRNLGLILFELLSEALGLKPNHLEE-MDCAEGL-ILLGHYYPACPQPELTFGTSKHSDSGFLTILMQDQIGGLQILLENQWIDVPFIPGALVINIADLLQLITNDKFKSVEHRVLANKVGPRISVAVAFGIKTQTQEGVSPRLYGPIKELISEEN-PPIYKEVTVKDFITIRFAKRFDDSSSLSPFRL 399          
BLAST of DY305579 vs. ExPASy Swiss-Prot
Match: ACCO_PRUMU (1-aminocyclopropane-1-carboxylate oxidase OS=Prunus mume GN=ACO1 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 5.248e-27
Identity = 64/180 (35.56%), Postives = 111/180 (61.67%), Query Frame = -1
Query:  248 FSEISLEYCKRIRQVARELLKGISESLGLEFCYIERAMNLDSG--LQILIANLYPPCPQPELAMGMPPHSDHGLLTLLTQNG-ICGLQLLHNGKWVNVNAVPNSFLVNTGDHIEILSNGKYKSVVHRAVVNNKMTRVSLAIANGPSLDTVVEPSKELIERQSEA--PAYIGIKYKDFLEL 772
            +  +  E+  ++ ++A +LL  + E+LGLE  Y+++A    +G      ++N YPPCP PEL  G+  H+D G L LL Q+  + GLQLL +G+W++V  + +S ++N GD +E+++NGKY+SV HR +     TR+S+A    P  D V+ P+  L+E+++E     Y    ++D+++L
Sbjct:  110 YRNVMKEFALKLEKLAEQLLDLLCENLGLEKGYLKKAFYGTNGPTFGTKVSN-YPPCPNPELIKGLRAHTDAGGLILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVINLGDQLEVITNGKYRSVEHRVIAQTDGTRMSIASFYNPGSDAVIYPAPTLVEKEAEEKNQVYPKFVFEDYMKL 288          
BLAST of DY305579 vs. ExPASy Swiss-Prot
Match: ACCO_PERAE (1-aminocyclopropane-1-carboxylate oxidase OS=Persea americana GN=ACO PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 5.248e-27
Identity = 66/179 (36.87%), Postives = 110/179 (61.45%), Query Frame = -1
Query:  248 EISLEYCKRIRQVARELLKGISESLGLEFCYIERAM-NLDSGLQILIANL--YPPCPQPELAMGMPPHSDHGLLTLLTQNG-ICGLQLLHNGKWVNVNAVPNSFLVNTGDHIEILSNGKYKSVVHRAVVNNKMTRVSLAIANGPSLDTVVEPSKELIERQSE--APAYIGIKYKDFLEL 766
            ++  E+ +++ ++A ++L  + E+LGLE  Y++ A     +GL      +  YPPCP+PEL  G+  H+D G L LL Q+  + GLQLL +G+WV+V  + +S ++N GD +E+++NGKYKSV+HR V      R+SLA    P  D V+ P+  L+E+++E     Y    ++D++ L
Sbjct:  111 KVMKEFAEKLEKLAEQVLDLLCENLGLEKGYLKMAFAGTTTGLPTFGTKVSNYPPCPRPELFKGLRAHTDAGGLILLFQDDRVAGLQLLKDGEWVDVPPMNHSIVINLGDQVEVITNGKYKSVMHRVVAQTDGNRMSLASFYNPGSDAVIFPAPALVEKEAEEKKEVYPKFVFEDYMNL 289          
BLAST of DY305579 vs. ExPASy Swiss-Prot
Match: ACCO_DIACA (Probable 1-aminocyclopropane-1-carboxylate oxidase OS=Dianthus caryophyllus GN=ACO PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 5.248e-27
Identity = 65/179 (36.31%), Postives = 110/179 (61.45%), Query Frame = -1
Query:  248 FSEISLEYCKRIRQVARELLKGISESLGLEFCYIERAMNLDSG--LQILIANLYPPCPQPELAMGMPPHSDHGLLTLLTQNG-ICGLQLLHNGKWVNVNAVPNSFLVNTGDHIEILSNGKYKSVVHRAVVNNKMTRVSLAIANGPSLDTVVEPSKELIERQSE-APAYIGIKYKDFLEL 772
            + ++  E+  +I +++ +LL  + E+LGLE  Y++ A    +G      ++N YPPCP+P+L  G+  H+D G + LL Q+  + GLQLL +G WV+V  + +S +VN GD +E+++NGKYKSV+HR +      R+S+A    P  D V+ P+  L+E++ E   AY    ++D++ L
Sbjct:  116 YRKLMKEFAAQIERLSEQLLDLLCENLGLEKAYLKNAFYGANGPTFGTKVSN-YPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGHWVDVPPMKHSIVVNLGDQLEVITNGKYKSVMHRVIAQTDGNRMSIASFYNPGSDAVIYPAPTLVEKEEEKCRAYPKFVFEDYMNL 293          
BLAST of DY305579 vs. ExPASy Swiss-Prot
Match: HY6H_HYONI (Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H6H PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 6.855e-27
Identity = 64/193 (33.16%), Postives = 107/193 (55.44%), Query Frame = -1
Query:  218 PNKPVGFSEISLEYCKRIRQVARELLKGISESLGLEFCYIERAMNLDSGLQILIANLYPPCPQPELAMGMPPHSDHGLLTLLTQNGICGLQ--LLHNGKWVNVNAVPNSFLVNTGDHIEILSNGKYKSVVHRAVVNNKMTRVSLAIANGPSLDTVVEPSKELIERQSEAPAYIGIKYKDFLELQQSNQLDNKS 790
            P KP  + E+  +Y   +R++   +L  I E LGL+  Y +  +   S +Q+++ N YPPCP P   +G   H D  L+TLL Q+ + GLQ  ++ +  W+ V  +P +F+VN G  +++++N K++  +HR V +    RVS+A   GP     +EP+KEL+  Q   P Y    Y +F ++  S++ D  S
Sbjct:  148 PEKPAKYREVVAKYSVEVRKLTMRMLDYICEGLGLKLGYFDNEL---SQIQMMLTNYYPPCPDPSSTLGSGGHYDGNLITLLQQD-LPGLQQLIVKDATWIAVQPIPTAFVVNLGLTLKVITNEKFEGSIHRVVTDPTRDRVSIATLIGPDYSCTIEPAKELL-NQDNPPLYKPYSYSEFADIYLSDKSDYDS 335          
The following BLAST results are available for this feature:
BLAST of DY305579 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
ACCH3_SOLLC1.058e-2736.871-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
ACCO2_SOLLC1.381e-2735.911-aminocyclopropane-1-carboxylate oxidase 2 OS=Sol... [more]
ACCO4_SOLLC1.804e-2736.961-aminocyclopropane-1-carboxylate oxidase 4 OS=Sol... [more]
ACCO2_MALDO1.804e-2735.681-aminocyclopropane-1-carboxylate oxidase 2 OS=Mal... [more]
ACCO1_MALDO1.804e-2737.571-aminocyclopropane-1-carboxylate oxidase 1 OS=Mal... [more]
DV4H_CATRO2.356e-2735.53Deacetoxyvindoline 4-hydroxylase OS=Catharanthus r... [more]
ACCO_PRUMU5.248e-2735.561-aminocyclopropane-1-carboxylate oxidase OS=Prunu... [more]
ACCO_PERAE5.248e-2736.871-aminocyclopropane-1-carboxylate oxidase OS=Perse... [more]
ACCO_DIACA5.248e-2736.31Probable 1-aminocyclopropane-1-carboxylate oxidase... [more]
HY6H_HYONI6.855e-2733.16Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1CA11RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305579 ID=DY305579; Name=DY305579; organism=Citrus sinensis; type=EST; length=1234bp
GCACACCAATATTTATTAGTTAATTTATTAATTAATTTTTAAAAAAAAAT
TAATTAATGTCAAAAATATTGTTTGAGATATATTTTAAAATATAAAAACC
AAACATACACTTAAATTAAAATATAATATAAAACTAAATTTAAATTTAAA
GCTTCAATGCCCTCACAAATCCACTCATGTATAGGCTATAAATTCAAACC
CTCACACGGTCCAAAACAGATTTATTATCAAGCTGGTTGCTTTGCTGAAG
TTCCAAAAAGTCCTTGTATTTTATTCCAATGTATGCCGGAGCTTCACTTT
GACGTTCTATCAACTCTTTCGATGGTTCAACGACCGTATCAAGAGATGGT
CCGTTCGCAATGGCTAACGATACCCTTGTCATCTTGTTGTTCACGACAGC
TCTATGCACAACACTCTTGTACTTGCCATTACTCAGAATCTCAATGTGAT
CACCAGTGTTAACAAGAAATGAGTTAGGGACAGCATTGACATTGACCCAC
TTTCCATTGTGTAGCAACTGAAGACCACAAATCCCATTCTGTGTGAGGAG
AGTCAATAGGCCATGATCAGAATGAGGAGGCATTCCCATTGCAAGCTCAG
GCTGTGGACACGGTGGGTACAAATTTGCAATCAGGATTTGCAAACCTGAA
TCTAGATTCATGGCCCTCTCGATGTAGCAGAATTCCAATCCCAAACTCTC
TGATATCCCTTTAAGCAACTCCCTTGCAACTTGTCGAATTCTTTTGCAAT
ATTCTAGTGAAATCTCACTGAATCCAACTGGCTTGTTTGGTGAATGGAAC
TCAAGATGAACGAGGACTTTGATAAAATCCCCTCCAAAAAAAACCTTCTC
AACCCAAGCATTTAAACTAATACCACATCTTAATGGGGTCAAAAACATGC
TTTCCCGCAAACTCTCTCTTCCTCTCCCTCCCTAAGGTTTAAAAATCTTT
TGACAAGAAACCCTCGTCCTTTCCCCTAAATTTCCCCGGGCAATTTAAGA
TTTATTATCCGGAAAAAAACCCCCATCTCCCTGCAGGCCTTTACCCAAAA
ATCCGGGAAAAAATTTGGAACCCTTAAAATGGGGGCGTGGAAAAAAATTT
AAAAAAAAAAAAAAAACCAAAAAACCGGGAAATCAAAAACTTTCTCGGGG
GGCAATATTTCCTTAAAAACCCTCCTTCTCTAATACCGTGTTTTTTTTTT
TTTTGTGGGGGGAAATGTGTTTTTTTTTTTGGTG
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