DY305579

Overview
NameDY305579
Unique NameDY305579
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1234
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305579 vs. ExPASy Swiss-Prot
Match: ACCO1_BRAJU (1-aminocyclopropane-1-carboxylate oxidase OS=Brassica juncea GN=ACO PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.094e-24
Identity = 58/172 (33.72%), Postives = 107/172 (62.21%), Query Frame = -1
Query:  248 EYCKRIRQVARELLKGISESLGLEFCYIERAMNLDSG--LQILIANLYPPCPQPELAMGMPPHSDHGLLTLLTQNG-ICGLQLLHNGKWVNVNAVPNSFLVNTGDHIEILSNGKYKSVVHRAVVNNKMTRVSLAIANGPSLDTVVEPSKELIERQSEAPAYIGIKYKDFLEL 754
            ++ KR+  +A +LL  + E+LGLE  Y+++  +   G      ++N YP CP+PE+  G+  H+D G + LL Q+  + GLQLL +G W++V  + +S ++N GD +E+++NG+YKS++HR V   +  R+S+A    P  D  + P+  L  +++E P+++   + D+++L
Sbjct:  119 DFGKRLENLAEDLLDLLCENLGLEKGYLKKVFHGTKGPTFGTKVSN-YPACPKPEMIKGLRAHTDAGGIILLFQDDKVTGLQLLKDGDWIDVPPLNHSIVINLGDQLEVITNGRYKSMMHRVVTQKEGNRMSIASFYNPGSDAEISPASSLACKETEYPSFV---FDDYMKL 286          
BLAST of DY305579 vs. ExPASy Swiss-Prot
Match: IDS2_HORVU (Mugineic-acid 3-dioxygenase OS=Hordeum vulgare GN=IDS2 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.429e-24
Identity = 71/224 (31.70%), Postives = 112/224 (50.00%), Query Frame = -1
Query:  224 LRCGISLNAWVEKVFFGGDFIKVLVHLEFHS----PNKPVGFSEISLEYCKRIRQVARELLKGISESLGLEFCYIERAMNLDSGLQILIANLYPPCPQPELAMGMPPHSDHGLLTLLTQNGICGLQLLHNGKWVNVNAVPNSFLVNTGDHIEILSNGKYKSVVHRAVVNNKMTRVSLAIANGPSLDTVVEPSKELIERQSEAPAYIGIKYKDFLELQQSNQLDN 883
            L CG +     EK +   D +++L  L        P+KP    E+   Y    R VA E+L+ + E LGL   +     ++  G  ++  N YPP P P   +G+PPH D  L+T+L    + GL++ + G W+ V  VPNS ++N G  +E+++NG  K+V HRA  N    R+S+A    P+ D VV P++E +  +   P Y  +   +F        LD+
Sbjct:  105 LFCGSAFETLGEKYWI--DVLELLYPLPSGDTKDWPHKPQMLREVVGNYTSLARGVAMEILRLLCEGLGLRPDFF--VGDISGGRVVVDINYYPPSPNPSRTLGLPPHCDRDLMTVLLPGAVPGLEIAYKGGWIKVQPVPNSLVINFGLQLEVVTNGYLKAVEHRAATNFAEPRLSVASFIVPADDCVVGPAEEFVS-EDNPPRYRTLTVGEFKRKHNVVNLDS 323          
BLAST of DY305579 vs. ExPASy Swiss-Prot
Match: GAO1B_WHEAT (Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN=GA20ox1B PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.429e-24
Identity = 63/186 (33.87%), Postives = 102/186 (54.84%), Query Frame = -1
Query:  209 EISLEYCKRIRQVARELLKGISESLGLEFCYIERAMNLDSGLQILIANLYPPCPQPELAMGMPPHSDHGLLTLLTQNGICGLQLLHNGKWVNVNAVPNSFLVNTGDHIEILSNGKYKSVVHRAVVNNKMTRVSLAIANGPSLDTVVEPSKELIERQSEAPAYIGIKYKDFLELQQSNQLDNKSVLD 766
            E+   YC  + +++ E+++ + ESLG+   +  R    +  +  L  N YPPC +P   +G  PH D   LT+L Q+ + GLQ+   G+W ++    ++F+VN GD    LSNG+YKS +HRAVVN+K+ R SLA    P +D VV P   L++  +   AY    ++  L+  Q +   +   L+
Sbjct:  162 EVYARYCSEMSRLSLEIMEVLGESLGVGRAHYRRFFEGNDSIMRL--NYYPPCQRPMETLGTGPHCDPTSLTILHQDNVGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVNSKVPRKSLAFFLCPEMDKVVAPPGTLVD-AANPRAYPDFTWRSLLDFTQKHYRADMKTLE 344          
BLAST of DY305579 vs. ExPASy Swiss-Prot
Match: GAO1A_WHEAT (Gibberellin 20 oxidase 1-A OS=Triticum aestivum GN=GA20ox1A PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.867e-24
Identity = 63/186 (33.87%), Postives = 102/186 (54.84%), Query Frame = -1
Query:  209 EISLEYCKRIRQVARELLKGISESLGLEFCYIERAMNLDSGLQILIANLYPPCPQPELAMGMPPHSDHGLLTLLTQNGICGLQLLHNGKWVNVNAVPNSFLVNTGDHIEILSNGKYKSVVHRAVVNNKMTRVSLAIANGPSLDTVVEPSKELIERQSEAPAYIGIKYKDFLELQQSNQLDNKSVLD 766
            E+   YC  + +++ E+++ + ESLG+   +  R    +  +  L  N YPPC +P   +G  PH D   LT+L Q+ + GLQ+   G+W ++    ++F+VN GD    LSNG+YKS +HRAVVN+++ R SLA    P +D VV P   L++  S   AY    ++  L+  Q +   +   L+
Sbjct:  162 EVYARYCSEMSRLSLEIMEVLGESLGVGRAHYRRFFEGNDSIMRL--NYYPPCQRPLETLGTGPHCDPTSLTILHQDNVGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVNSRVPRKSLAFFLCPEMDKVVAPPGTLVD-ASNPRAYPDFTWRSLLDFTQKHYRADMKTLE 344          
BLAST of DY305579 vs. ExPASy Swiss-Prot
Match: FNSI_PETCR (Flavone synthase OS=Petroselinum crispum GN=FNSI PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.867e-24
Identity = 60/160 (37.50%), Postives = 100/160 (62.50%), Query Frame = -1
Query:  317 PNKPVGFSEISLEYCKRIRQVARELLKGISESLGLEFCYIERAMNLDSGLQILIANLYPPCPQPELAMGMPPHSDHGLLTLLTQNGICGLQLLHNG--KWVNVNAVPNSFLVNTGDHIEILSNGKYKSVVHRAVVNNKMTRVSLAIANGPSLDTVVEPSK 790
            P KP G+   +  Y +++  +  +LL+ +SE++GLE   + +A  +D   ++LI N YP CPQP+L +G+  H+D G +T+L Q+ + GLQ   +G   W+ V  V  +F+VN GDH   LSNG++++  H+AVVN+  +R+S+A    P+ + +V P K
Sbjct:  148 PKKPEGWRSTTEVYSEKLMVLGAKLLEVLSEAMGLEKGDLTKAC-VDMEQKVLI-NYYPTCPQPDLTLGVRRHTDPGTITILLQDMVGGLQATRDGGKTWITVQPVEGAFVVNLGDHGHYLSNGRFRNADHQAVVNSTSSRLSIATFQNPAQNAIVYPLK 305          
BLAST of DY305579 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSJ (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. japonica GN=20ox2 PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 2.438e-24
Identity = 66/182 (36.26%), Postives = 99/182 (54.40%), Query Frame = -1
Query:  209 EYCKRIRQVARELLKGISESLGLEFCYIERAMNLDSGLQILIANLYPPCPQPELAMGMPPHSDHGLLTLLTQNGICGLQLLHNGKWVNVNAVPNSFLVNTGDHIEILSNGKYKSVVHRAVVNNKMTRVSLAIANGPSLDTVVEPSKELIERQSEAPAYIGIKYKDFLELQQSNQLDNKSVLD 754
            +YC+ +++++  +++ +  SLG+E  Y  R    DS   I+  N YPPCP+PE  +G  PH D   LT+L Q+ + GL++L +G+W  V+ VP + ++N GD    LSNG+YKS +HRAVVN +  R SLA    P  D VV P       Q     Y    + D +   Q +   +   LD
Sbjct:  191 KYCEEMKELSLTIMELLELSLGVERGYY-REFFADSS-SIMRCNYYPPCPEPERTLGTGPHCDPTALTILLQDDVGGLEVLVDGEWRPVSPVPGAMVINIGDTFMALSNGRYKSCLHRAVVNQRRERRSLAFFLCPREDRVVRPPPSAATPQH----YPDFTWADLMRFTQRHYRADTRTLD 366          
BLAST of DY305579 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSI (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. indica GN=20ox2 PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 2.438e-24
Identity = 66/182 (36.26%), Postives = 99/182 (54.40%), Query Frame = -1
Query:  209 EYCKRIRQVARELLKGISESLGLEFCYIERAMNLDSGLQILIANLYPPCPQPELAMGMPPHSDHGLLTLLTQNGICGLQLLHNGKWVNVNAVPNSFLVNTGDHIEILSNGKYKSVVHRAVVNNKMTRVSLAIANGPSLDTVVEPSKELIERQSEAPAYIGIKYKDFLELQQSNQLDNKSVLD 754
            +YC+ +++++  +++ +  SLG+E  Y  R    DS   I+  N YPPCP+PE  +G  PH D   LT+L Q+ + GL++L +G+W  V+ VP + ++N GD    LSNG+YKS +HRAVVN +  R SLA    P  D VV P       Q     Y    + D +   Q +   +   LD
Sbjct:  191 KYCEEMKELSLTIMELLELSLGVERGYY-REFFADSS-SIMRCNYYPPCPEPERTLGTGPHCDPTALTILLQDDVGGLEVLVDGEWRPVSPVPGAMVINIGDTFMALSNGRYKSCLHRAVVNQRRERRSLAFFLCPREDRVVRPPPSAATPQH----YPDFTWADLMRFTQRHYRADTRTLD 366          
BLAST of DY305579 vs. ExPASy Swiss-Prot
Match: G3OX1_ARATH (Gibberellin 3-beta-dioxygenase 1 OS=Arabidopsis thaliana GN=GA4 PE=1 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 2.438e-24
Identity = 69/189 (36.51%), Postives = 105/189 (55.56%), Query Frame = -1
Query:  236 PNKPVGFSEISLEYCKRIRQVARELLKGISESLGLEFCYIERAM---NLDSGLQILIANLYPPCPQPELAMGMPPHSDHGLLTLLTQNGICGLQLLHNGK-WVNVNAVPNSFLVNTGDHIEILSNGKYKSVVHRAVVNNKMTRVSLAIANGPSLDTVVEPSKELIERQSEAPAYIGIKYKDFLELQQSN 790
            P   + + +I  EY + ++++A +L+     SLG+    IE A    +L+     L  N YP CP+P+ AMG+  H+D  LLT+L QN   GLQ+  +   WV V   P S +VN GD   ILSNG +KSV+HRA VN    R+S+A   GP  D  + P  +L+    E+P Y  + +K++L  + ++
Sbjct:  157 PQHHLNYCDIVEEYEEHMKKLASKLMWLALNSLGVSEEDIEWASLSSDLNWAQAALQLNHYPVCPEPDRAMGLAAHTDSTLLTILYQNNTAGLQVFRDDLGWVTVPPFPGSLVVNVGDLFHILSNGLFKSVLHRARVNQTRARLSVAFLWGPQSDIKISPVPKLVS-PVESPLYQSVTWKEYLRTKATH 344          
BLAST of DY305579 vs. ExPASy Swiss-Prot
Match: GAOX3_ARATH (Gibberellin 20 oxidase 3 OS=Arabidopsis thaliana GN=20ox3 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 4.159e-24
Identity = 67/193 (34.72%), Postives = 107/193 (55.44%), Query Frame = -1
Query:  197 FSEISLEYCKRIRQVARELLKGISESLGLEFCYIERAMNLDSGLQILIANLYPPCPQPELAMGMPPHSDHGLLTLLTQNGICGLQLLHNGKWVNVNAVPNSFLVNTGDHIEILSNGKYKSVVHRAVVNNKMTRVSLAIANGPSLDTVVEPSKELIER-QSEAPAYIGIKYKDFLELQQSNQLDNKSVLDRVRV 772
            F ++  EY + +  ++ ++++ +  SLG+E  Y +     DS   I   N YP C QPELA+G  PH D   LT+L Q+ + GLQ+  + KW ++   P++F+VN GD    L+NG+YKS +HRAVVN++  R + A    P  + VV+P +EL+   +S    Y    +  FLE  Q +   + + LD   +
Sbjct:  182 FGKVYQEYAEAMNTLSLKIMELLGMSLGVERRYFKEFFE-DSD-SIFRLNYYPQCKQPELALGTGPHCDPTSLTILHQDQVGGLQVFVDNKWQSIPPNPHAFVVNIGDTFMALTNGRYKSCLHRAVVNSERERKTFAFFLCPKGEKVVKPPEELVNGVKSGERKYPDFTWSMFLEFTQKHYRADMNTLDEFSI 372          
BLAST of DY305579 vs. ExPASy Swiss-Prot
Match: GAO1D_WHEAT (Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN=GA20ox1D PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 4.159e-24
Identity = 62/186 (33.33%), Postives = 102/186 (54.84%), Query Frame = -1
Query:  209 EISLEYCKRIRQVARELLKGISESLGLEFCYIERAMNLDSGLQILIANLYPPCPQPELAMGMPPHSDHGLLTLLTQNGICGLQLLHNGKWVNVNAVPNSFLVNTGDHIEILSNGKYKSVVHRAVVNNKMTRVSLAIANGPSLDTVVEPSKELIERQSEAPAYIGIKYKDFLELQQSNQLDNKSVLD 766
            E+   YC  + +++ E+++ + ESLG+   +  R    +  +  L  N YPPC +P   +G  PH D   LT+L Q+ + GLQ+   G+W ++    ++F+VN GD    LSNG+YKS +HRAVVN+++ R SLA    P +D VV P   L++  +   AY    ++  L+  Q +   +   L+
Sbjct:  162 EVYARYCSEMSRLSLEIMEVLGESLGVGRAHYRRFFEGNDSIMRL--NYYPPCQRPLETLGTGPHCDPTSLTILHQDNVGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVNSRVPRKSLAFFLCPEMDKVVAPPGTLVD-AANPRAYPDFTWRSLLDFTQKHYRADMKTLE 344          
The following BLAST results are available for this feature:
BLAST of DY305579 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
ACCO1_BRAJU1.094e-2433.721-aminocyclopropane-1-carboxylate oxidase OS=Brass... [more]
IDS2_HORVU1.429e-2431.70Mugineic-acid 3-dioxygenase OS=Hordeum vulgare GN=... [more]
GAO1B_WHEAT1.429e-2433.87Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN... [more]
GAO1A_WHEAT1.867e-2433.87Gibberellin 20 oxidase 1-A OS=Triticum aestivum GN... [more]
FNSI_PETCR1.867e-2437.50Flavone synthase OS=Petroselinum crispum GN=FNSI P... [more]
GAOX2_ORYSJ2.438e-2436.26Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. ja... [more]
GAOX2_ORYSI2.438e-2436.26Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. in... [more]
G3OX1_ARATH2.438e-2436.51Gibberellin 3-beta-dioxygenase 1 OS=Arabidopsis th... [more]
GAOX3_ARATH4.159e-2434.72Gibberellin 20 oxidase 3 OS=Arabidopsis thaliana G... [more]
GAO1D_WHEAT4.159e-2433.33Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1CA11RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305579 ID=DY305579; Name=DY305579; organism=Citrus sinensis; type=EST; length=1234bp
GCACACCAATATTTATTAGTTAATTTATTAATTAATTTTTAAAAAAAAAT
TAATTAATGTCAAAAATATTGTTTGAGATATATTTTAAAATATAAAAACC
AAACATACACTTAAATTAAAATATAATATAAAACTAAATTTAAATTTAAA
GCTTCAATGCCCTCACAAATCCACTCATGTATAGGCTATAAATTCAAACC
CTCACACGGTCCAAAACAGATTTATTATCAAGCTGGTTGCTTTGCTGAAG
TTCCAAAAAGTCCTTGTATTTTATTCCAATGTATGCCGGAGCTTCACTTT
GACGTTCTATCAACTCTTTCGATGGTTCAACGACCGTATCAAGAGATGGT
CCGTTCGCAATGGCTAACGATACCCTTGTCATCTTGTTGTTCACGACAGC
TCTATGCACAACACTCTTGTACTTGCCATTACTCAGAATCTCAATGTGAT
CACCAGTGTTAACAAGAAATGAGTTAGGGACAGCATTGACATTGACCCAC
TTTCCATTGTGTAGCAACTGAAGACCACAAATCCCATTCTGTGTGAGGAG
AGTCAATAGGCCATGATCAGAATGAGGAGGCATTCCCATTGCAAGCTCAG
GCTGTGGACACGGTGGGTACAAATTTGCAATCAGGATTTGCAAACCTGAA
TCTAGATTCATGGCCCTCTCGATGTAGCAGAATTCCAATCCCAAACTCTC
TGATATCCCTTTAAGCAACTCCCTTGCAACTTGTCGAATTCTTTTGCAAT
ATTCTAGTGAAATCTCACTGAATCCAACTGGCTTGTTTGGTGAATGGAAC
TCAAGATGAACGAGGACTTTGATAAAATCCCCTCCAAAAAAAACCTTCTC
AACCCAAGCATTTAAACTAATACCACATCTTAATGGGGTCAAAAACATGC
TTTCCCGCAAACTCTCTCTTCCTCTCCCTCCCTAAGGTTTAAAAATCTTT
TGACAAGAAACCCTCGTCCTTTCCCCTAAATTTCCCCGGGCAATTTAAGA
TTTATTATCCGGAAAAAAACCCCCATCTCCCTGCAGGCCTTTACCCAAAA
ATCCGGGAAAAAATTTGGAACCCTTAAAATGGGGGCGTGGAAAAAAATTT
AAAAAAAAAAAAAAAACCAAAAAACCGGGAAATCAAAAACTTTCTCGGGG
GGCAATATTTCCTTAAAAACCCTCCTTCTCTAATACCGTGTTTTTTTTTT
TTTTGTGGGGGGAAATGTGTTTTTTTTTTTGGTG
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