DY305579

Overview
NameDY305579
Unique NameDY305579
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1234
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305579 vs. ExPASy Swiss-Prot
Match: ACCO2_DORSP (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Doritaenopsis sp. GN=ACO2 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 4.159e-24
Identity = 65/186 (34.95%), Postives = 105/186 (56.45%), Query Frame = -1
Query:  221 EYCKRIRQVARELLKGISESLGLEFCYIERAMNLDS-GLQILIANL--YPPCPQPELAMGMPPHSDHGLLTLLTQNG-ICGLQLLHNGKWVNVNAVPNSFLVNTGDHIEILSNGKYKSVVHRAVVNNKMTRVSLAIANGPSLDTVVEPSKELIERQSE----APAYIGIKYKDFLELQQSNQLDNK 754
            E+ + + ++A  LL  + E LGLE  Y++R     S GL      +  YPPCP+P+L  G+  H+D G + LL Q+  + GLQLL + +W+ V  +  S +VN GD +E+++NGKYKSV+HR V      R+S+A    P  D V+ P+  L+E+++E       Y    ++D++ L    + + K
Sbjct:  118 EFARELEKLAERLLDLLCEDLGLEKGYLKRVFCGGSDGLPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDREWIEVPPLRYSIVVNIGDQLEVITNGKYKSVLHRVVAQTDGNRMSIASFYNPGSDAVIFPAPALVEKEAEEEEKKEIYPKFVFQDYMNLYIRKKFEAK 303          
BLAST of DY305579 vs. ExPASy Swiss-Prot
Match: GAOX2_ARATH (Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana GN=20ox2 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.210e-23
Identity = 61/188 (32.45%), Postives = 102/188 (54.26%), Query Frame = -1
Query:  209 FSEISLEYCKRIRQVARELLKGISESLGLEFCYIERAMNLDSGLQILIANLYPPCPQPELAMGMPPHSDHGLLTLLTQNGICGLQLLHNGKWVNVNAVPNSFLVNTGDHIEILSNGKYKSVVHRAVVNNKMTRVSLAIANGPSLDTVVEPSKELIERQSEAPAYIGIKYKDFLELQQSNQLDNKSVLD 772
            F ++  +YC+ +  ++ ++++ +  SLG+   Y       +  +  L  N YPPC  P+L +G  PH D   LT+L Q+ + GLQ+  + +W ++   P +F+VN GD    LSNG +KS +HRAVVN +  R S+A    P  D VV+P  +++E+  +   Y    +  FLE  Q +   + + LD
Sbjct:  181 FGKVYQDYCEAMSSLSLKIMELLGLSLGVNRDYFRGFFEENDSIMRL--NHYPPCQTPDLTLGTGPHCDPSSLTILHQDHVNGLQVFVDNQWQSIRPNPKAFVVNIGDTFMALSNGIFKSCLHRAVVNRESARKSMAFFLCPKKDKVVKPPSDILEKM-KTRKYPDFTWSMFLEFTQKHYRADVNTLD 365          
BLAST of DY305579 vs. ExPASy Swiss-Prot
Match: GAOX1_ARATH (Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana GN=20ox1 PE=2 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 1.210e-23
Identity = 62/179 (34.64%), Postives = 99/179 (55.31%), Query Frame = -1
Query:  236 FSEISLEYCKRIRQVARELLKGISESLGLEFCYIERAMNLDSGLQILIANLYPPCPQPELAMGMPPHSDHGLLTLLTQNGICGLQLLHNGKWVNVNAVPNSFLVNTGDHIEILSNGKYKSVVHRAVVNNKMTRVSLAIANGPSLDTVVEPSKELIERQSEAPAYIGIKYKDFLELQQSN 772
            F ++  EYC+ +  ++ ++++ +  SLG++  Y       +  +  L  N YPPC +P+L +G  PH D   LT+L Q+ + GLQ+    +W ++   P +F+VN GD    LSN +YKS +HRAVVN++  R SLA    P  D VV P +EL++    +  Y    +  FLE  Q +
Sbjct:  183 FGKVYQEYCEAMSSLSLKIMELLGLSLGVKRDYFREFFEENDSIMRL--NYYPPCIKPDLTLGTGPHCDPTSLTILHQDHVNGLQVFVENQWRSIRPNPKAFVVNIGDTFMALSNDRYKSCLHRAVVNSESERKSLAFFLCPKKDRVVTPPRELLD-SITSRRYPDFTWSMFLEFTQKH 358          
BLAST of DY305579 vs. ExPASy Swiss-Prot
Match: G3OX2_ARATH (Gibberellin 3-beta-dioxygenase 2 OS=Arabidopsis thaliana GN=GA4H PE=1 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 1.210e-23
Identity = 70/197 (35.53%), Postives = 115/197 (58.38%), Query Frame = -1
Query:  212 PNKPVGFSEISLEYCKRIRQVARELLKGISESLGLEFCYIERA-MNLD-SGLQILIA-NLYPPCPQPELAMGMPPHSDHGLLTLLTQNGICGLQLLHNGK-WVNVNAVPNSFLVNTGDHIEILSNGKYKSVVHRAVVNNKMTRVSLAIANGPSLDTVVEPSKELIERQSEAPAYIGIKYKDFLELQQSNQLDNKSVL 790
            P+  + + EI  EY + ++++A +L+     SLG+E   I+ A  N D  G Q +I  N YP CP+P+ AMG+  H+D  L+T+L QN   GLQ+  +   WV    VP S +VN GD + IL+NG + SV+HRA VN+  +R S+A   GP  D ++ P  +L++   ++P Y  + +K +L  + ++   + S++
Sbjct:  150 PSHHLKYCEIIEEYEEHMQKLAAKLMWFALGSLGVEEKDIQWAGPNSDFQGTQAVIQLNHYPKCPEPDRAMGLAAHTDSTLMTILYQNNTAGLQVFRDDVGWVTAPPVPGSLVVNVGDLLHILTNGIFPSVLHRARVNHVRSRFSMAYLWGPPSDIMISPLPKLVD-PLQSPLYPSLTWKQYLATKATHFNQSLSII 345          
BLAST of DY305579 vs. ExPASy Swiss-Prot
Match: ACCO1_ARATH (1-aminocyclopropane-1-carboxylate oxidase OS=Arabidopsis thaliana GN=ACO PE=2 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 1.580e-23
Identity = 66/197 (33.50%), Postives = 115/197 (58.38%), Query Frame = -1
Query:  221 PNKPVGFSEISLEYCKRIRQVARELLKGISESLGLEFCYIERAM--NLDSGLQILIANLYPPCPQPELAMGMPPHSDHGLLTLLTQNG-ICGLQLLHNGKWVNVNAVPNSFLVNTGDHIEILSNGKYKSVVHRAV-VNNKMTRVSLAIANGPSLDTVVEPSKELIERQSEAPA---YIGIKYKDFLELQQSNQLDNK 790
            P+    +  +  ++  +I +++ ELL  + E+LGLE  Y+++    +        ++N YPPCP P+L  G+  H+D G + LL Q+  + GLQLL +G+WV+V  V +S +VN GD +E+++NGKYKSV HR +   +   R+S+A    P  D+V+ P+ ELI +++E      Y    ++D+++L  + +   K
Sbjct:  104 PDLDDDYRTLMKDFAGKIEKLSEELLDLLCENLGLEKGYLKKVFYGSKRPTFGTKVSN-YPPCPNPDLVKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWVDVPPVKHSIVVNLGDQLEVITNGKYKSVEHRVLSQTDGEGRMSIASFYNPGSDSVIFPAPELIGKEAEKEKKENYPRFVFEDYMKLYSAVKFQAK 299          
BLAST of DY305579 vs. ExPASy Swiss-Prot
Match: NCS1_COPJA (S-norcoclaurine synthase 1 OS=Coptis japonica GN=NCS1 PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.747e-22
Identity = 66/199 (33.17%), Postives = 108/199 (54.27%), Query Frame = -1
Query:  197 PNKPVGFSEISLEYCKRIRQVARELLKGISESLGLEFCYIERAMNLDSGLQILIANLYPPCPQPELAMGMPPHSDHGLLTLLTQ-NGICGLQLLHNGKWVNVNAVPNSFLVNTGDHIEILSNGKYKSVVHRAVVNNKMTRVSLAIANGPSLDTVVEPSKELIERQSEAPAYIGIKYKDFLELQQSNQLDNKSVLDRVRV 790
            P  P  F E   +Y   +++VA  L   ++++LGLE   + + +      +  +      C +    +G+ PHSD   LTLL Q N + GL +  + KWV +  +  +F+VN GD IEI+SNG YKS+ HRAV+N    R+S+A  + P   T + P  +L+  +     Y  I Y+D+L    + +LD KS+LD++++
Sbjct:  159 PTSPTSFRETMEKYSMELQKVAMCLTGMMAKNLGLESEILTKPLRTVFNREDELLPSMSSCGE---GLGLSPHSDATGLTLLIQVNEVNGLHIKKDEKWVPIKPILGAFVVNIGDVIEIMSNGIYKSIEHRAVINTDKERLSIAAFHDPEYGTKIGPLPDLV--KENGVKYKTIDYEDYLIRSSNIKLDGKSLLDQMKL 352          
BLAST of DY305579 vs. ExPASy Swiss-Prot
Match: LDOX_MAIZE (Leucoanthocyanidin dioxygenase OS=Zea mays GN=A2 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 2.282e-22
Identity = 69/191 (36.13%), Postives = 102/191 (53.40%), Query Frame = -1
Query:  308 DFIKVLVH---LEFHS--PNKPVGFSEISLEYCKRIRQVARELLKGISESL-----------GLEFCYIERAMNLDSGLQILIANLYPPCPQPELAMGMPPHSDHGLLTLLTQNGICGLQLLHNGKWVNVNAVPNSFLVNTGDHIEILSNGKYKSVVHRAVVNNKMTRVSLAIANGPSLDTV-VEPSKELI 829
            D++  LVH   L  H+  P  P  +   + ++ +R R +A  LL  +S  L            L       A + D  LQ+ I N YP CPQPELA+G+  H+D   L+ +  NG+ GLQ+LH  +WV     P + +V+ GD +EILSNG+Y SV+HR +VN +  R+S  +   P  D+V + P  EL+
Sbjct:  154 DYLFHLVHPDGLADHALWPAYPPDYIAATRDFGRRTRDLASTLLAILSMGLLGTDRGDALEKALTTTTTRTAADDDLLLQLKI-NYYPRCPQPELAVGVEAHTDVSALSFILHNGVPGLQVLHGARWVTARHEPGTIIVHVGDALEILSNGRYTSVLHRGLVNREAVRISWVVFCEPPPDSVLLHPLPELV 343          
BLAST of DY305579 vs. ExPASy Swiss-Prot
Match: G3OX4_ARATH (Gibberellin 3-beta-dioxygenase 4 OS=Arabidopsis thaliana GN=At1g80330 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 2.282e-22
Identity = 70/189 (37.04%), Postives = 101/189 (53.44%), Query Frame = -1
Query:  245 PNKPVGFSEISLEYCKRIRQVARELLKGISESLGLEFCYIERAMNLDS-----GLQILIANLYPPCPQPELAMGMPPHSDHGLLTLLTQNGICGLQLLHNGK-WVNVNAVPNSFLVNTGDHIEILSNGKYKSVVHRAVVNNKMTRVSLA-IANGPSLDTVVEPSKELIERQSEAPAYIGIKYKDFLELQ 790
            P+    +  I  EY   + ++A  LL  I  SLG+    IE A  L+      G   +  N YP CP+PE AMG+  H+D  +LT+L Q+   GLQ+      WV V   P   +VN GD   ILSNGK  SVVHRA VN+  +R+S+A +  GP+ D  + P  +L    +E   Y  I +K++L+++
Sbjct:  150 PHDHTKYCGIIQEYVDEMEKLASRLLYCILGSLGVTVEDIEWAHKLEKSGSKVGRGAIRLNHYPVCPEPERAMGLAAHTDSTILTILHQSNTGGLQVFREESGWVTVEPAPGVLVVNIGDLFHILSNGKIPSVVHRAKVNHTRSRISIAYLWGGPAGDVQIAPISKL-TGPAEPSLYRSITWKEYLQIK 337          
BLAST of DY305579 vs. ExPASy Swiss-Prot
Match: G3O23_WHEAT (Gibberellin 3-beta-dioxygenase 2-3 OS=Triticum aestivum GN=GA3ox2-3 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 2.282e-22
Identity = 64/184 (34.78%), Postives = 99/184 (53.80%), Query Frame = -1
Query:  257 FSEISLEYCKRIRQVARELLKGISESLGL---EFCYIERAMNLDSGLQILI-ANLYPPCPQPELAMGMPPHSDHGLLTLLTQNGICGLQLLHNG--KWVNVNAVPNSFLVNTGDHIEILSNGKYKSVVHRAVVNNKMTRVSLAIANGPSLDTVVEPSKELIERQSEA------PAYIGIKYKDF 772
            F  +  E+ + +R +A +LL+    +LGL   +   +E    +   +   +  N YP CP P+ A+G+  H+D G  T + Q+ + GLQL  +G  +WV V AVP + +VN GD  +IL+NG++ SV HRAVVN +  R+SL    GP     V P +E +     A      P Y+G++ K F
Sbjct:  159 FCAVMEEFHREMRALADKLLELFLVALGLTGEQVAAVESEQKIAETMTATMHLNWYPKCPDPKRALGLIAHTDSGFFTFVLQSLVPGLQLFRHGPDRWVTVPAVPGAMVVNVGDLFQILTNGRFHSVYHRAVVNRESDRISLGYFLGPPAHVKVAPLREALAGTPAAYRAVTWPEYMGVRKKAF 342          
BLAST of DY305579 vs. ExPASy Swiss-Prot
Match: G3O22_WHEAT (Gibberellin 3-beta-dioxygenase 2-2 OS=Triticum aestivum GN=GA3ox2-2 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 3.892e-22
Identity = 64/184 (34.78%), Postives = 98/184 (53.26%), Query Frame = -1
Query:  257 FSEISLEYCKRIRQVARELLKGISESLGL---EFCYIERAMNLDSGLQILI-ANLYPPCPQPELAMGMPPHSDHGLLTLLTQNGICGLQLLHNG--KWVNVNAVPNSFLVNTGDHIEILSNGKYKSVVHRAVVNNKMTRVSLAIANGPSLDTVVEPSKELIERQSEA------PAYIGIKYKDF 772
            F  +  E+ + +R +A +LL+    +LGL   +   +E    +   +   +  N YP CP P+ A+G+  H+D G  T + Q+ + GLQL  +G  +WV V AVP + +VN GD  +IL+NG++ SV HRAVVN    R+SL    GP     V P +E +     A      P Y+G++ K F
Sbjct:  159 FCAVMEEFHREMRALADKLLELFLVALGLTGEQVAAVESEQKIAETMTATMHLNWYPKCPDPKRALGLIAHTDSGFFTFVLQSLVPGLQLFRHGPDRWVTVPAVPGAMVVNVGDLFQILTNGRFHSVYHRAVVNRDSDRISLGYFLGPPAHVKVAPLREALAGTPAAYRAVTWPEYMGVRKKAF 342          
The following BLAST results are available for this feature:
BLAST of DY305579 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
ACCO2_DORSP4.159e-2434.951-aminocyclopropane-1-carboxylate oxidase 2 OS=Dor... [more]
GAOX2_ARATH1.210e-2332.45Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana G... [more]
GAOX1_ARATH1.210e-2334.64Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana G... [more]
G3OX2_ARATH1.210e-2335.53Gibberellin 3-beta-dioxygenase 2 OS=Arabidopsis th... [more]
ACCO1_ARATH1.580e-2333.501-aminocyclopropane-1-carboxylate oxidase OS=Arabi... [more]
NCS1_COPJA1.747e-2233.17S-norcoclaurine synthase 1 OS=Coptis japonica GN=N... [more]
LDOX_MAIZE2.282e-2236.13Leucoanthocyanidin dioxygenase OS=Zea mays GN=A2 P... [more]
G3OX4_ARATH2.282e-2237.04Gibberellin 3-beta-dioxygenase 4 OS=Arabidopsis th... [more]
G3O23_WHEAT2.282e-2234.78Gibberellin 3-beta-dioxygenase 2-3 OS=Triticum aes... [more]
G3O22_WHEAT3.892e-2234.78Gibberellin 3-beta-dioxygenase 2-2 OS=Triticum aes... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1CA11RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305579 ID=DY305579; Name=DY305579; organism=Citrus sinensis; type=EST; length=1234bp
GCACACCAATATTTATTAGTTAATTTATTAATTAATTTTTAAAAAAAAAT
TAATTAATGTCAAAAATATTGTTTGAGATATATTTTAAAATATAAAAACC
AAACATACACTTAAATTAAAATATAATATAAAACTAAATTTAAATTTAAA
GCTTCAATGCCCTCACAAATCCACTCATGTATAGGCTATAAATTCAAACC
CTCACACGGTCCAAAACAGATTTATTATCAAGCTGGTTGCTTTGCTGAAG
TTCCAAAAAGTCCTTGTATTTTATTCCAATGTATGCCGGAGCTTCACTTT
GACGTTCTATCAACTCTTTCGATGGTTCAACGACCGTATCAAGAGATGGT
CCGTTCGCAATGGCTAACGATACCCTTGTCATCTTGTTGTTCACGACAGC
TCTATGCACAACACTCTTGTACTTGCCATTACTCAGAATCTCAATGTGAT
CACCAGTGTTAACAAGAAATGAGTTAGGGACAGCATTGACATTGACCCAC
TTTCCATTGTGTAGCAACTGAAGACCACAAATCCCATTCTGTGTGAGGAG
AGTCAATAGGCCATGATCAGAATGAGGAGGCATTCCCATTGCAAGCTCAG
GCTGTGGACACGGTGGGTACAAATTTGCAATCAGGATTTGCAAACCTGAA
TCTAGATTCATGGCCCTCTCGATGTAGCAGAATTCCAATCCCAAACTCTC
TGATATCCCTTTAAGCAACTCCCTTGCAACTTGTCGAATTCTTTTGCAAT
ATTCTAGTGAAATCTCACTGAATCCAACTGGCTTGTTTGGTGAATGGAAC
TCAAGATGAACGAGGACTTTGATAAAATCCCCTCCAAAAAAAACCTTCTC
AACCCAAGCATTTAAACTAATACCACATCTTAATGGGGTCAAAAACATGC
TTTCCCGCAAACTCTCTCTTCCTCTCCCTCCCTAAGGTTTAAAAATCTTT
TGACAAGAAACCCTCGTCCTTTCCCCTAAATTTCCCCGGGCAATTTAAGA
TTTATTATCCGGAAAAAAACCCCCATCTCCCTGCAGGCCTTTACCCAAAA
ATCCGGGAAAAAATTTGGAACCCTTAAAATGGGGGCGTGGAAAAAAATTT
AAAAAAAAAAAAAAAACCAAAAAACCGGGAAATCAAAAACTTTCTCGGGG
GGCAATATTTCCTTAAAAACCCTCCTTCTCTAATACCGTGTTTTTTTTTT
TTTTGTGGGGGGAAATGTGTTTTTTTTTTTGGTG
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