DY305579

Overview
NameDY305579
Unique NameDY305579
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1234
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305579 vs. ExPASy Swiss-Prot
Match: G3O21_WHEAT (Gibberellin 3-beta-dioxygenase 2-1 OS=Triticum aestivum GN=GA3ox2-1 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 6.639e-22
Identity = 64/184 (34.78%), Postives = 98/184 (53.26%), Query Frame = -1
Query:  257 FSEISLEYCKRIRQVARELLKGISESLGL---EFCYIERAMNLDSGLQILI-ANLYPPCPQPELAMGMPPHSDHGLLTLLTQNGICGLQLLHNG--KWVNVNAVPNSFLVNTGDHIEILSNGKYKSVVHRAVVNNKMTRVSLAIANGPSLDTVVEPSKELIERQSEA------PAYIGIKYKDF 772
            F  +  E+ + +R +A +LL+    +LGL   +   +E    +   +   +  N YP CP P+ A+G+  H+D G  T + Q+ + GLQL  +G  +WV V AVP + +VN GD  +IL+NG++ SV HRAVVN    R+SL    GP     V P +E +     A      P Y+G++ K F
Sbjct:  159 FCAVMEEFHREMRALADKLLELFLVALGLTGEQVAAVESEHKIAETMTATMHLNWYPKCPDPKRALGLIAHTDSGFFTFVLQSLVPGLQLFRHGPDRWVTVPAVPGAMVVNVGDLFQILTNGRFHSVYHRAVVNRDSDRISLGYFLGPPAHVKVAPLREALAGTPAAYRAVTWPEYMGVRKKAF 342          
BLAST of DY305579 vs. ExPASy Swiss-Prot
Match: GAOX1_ORYSJ (Gibberellin 20 oxidase 1 OS=Oryza sativa subsp. japonica GN=20ox1 PE=2 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 4.303e-21
Identity = 57/157 (36.31%), Postives = 87/157 (55.41%), Query Frame = -1
Query:  305 EISLEYCKRIRQVARELLKGISESLGL---EFCYIERAMNLDSGLQILIANLYPPCPQPELAMGMPPHSDHGLLTLLTQNGICGLQLLHNGKWVNVNAVPNSFLVNTGDHIEILSNGKYKSVVHRAVVNNKMTRVSLAIANGPSLDTVVEPSKELIE 766
            E+   YC  + +++ EL++ + ESLG+      Y  R    +  +  L  N YP C +P   +G  PH D   LT+L Q+ + GL++   G+W  +   P + +VN GD    LSN +Y+S +HRAVVN+   R SLA    P +DTVV P +EL++
Sbjct:  169 EVYSRYCHEMSRLSLELMEVLGESLGIVGDRRHYFRRFFQRNDSIMRL--NYYPACQRPLDTLGTGPHCDPTSLTILHQDHVGGLEVWAEGRWRAIRPRPGALVVNVGDTFMALSNARYRSCLHRAVVNSTAPRRSLAFFLCPEMDTVVRPPEELVD 323          
BLAST of DY305579 vs. ExPASy Swiss-Prot
Match: G2OX8_ARATH (Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 5.620e-21
Identity = 51/130 (39.23%), Postives = 74/130 (56.92%), Query Frame = -1
Query:  236 NLYPPCPQPELAMGMPPHSDHGLLTLLTQNGICGLQLLHNGKWVNVNAVPNSFLVNTGDHIEILSNGKYKSVVHRAVVNNKMTRVSLAIANGPSLDTVVEPSKELIERQSEAPAYIGIKYKDFLELQQSN 625
            N YPPCP+P    G+ PH+D   LT+L Q+ + GLQL+ + +W+ V   P + ++N GD  +  SNG YKSV HR + N K+ R S A    PS D V+E S       S+ PAY    +++F +  Q +
Sbjct:  198 NRYPPCPKPSEVYGLMPHTDSDFLTILYQDQVGGLQLIKDNRWIAVKPNPKALIINIGDLFQAWSNGMYKSVEHRVMTNPKVERFSTAYFMCPSYDAVIECS-------SDRPAYRNFSFREFRQQVQED 320          
BLAST of DY305579 vs. ExPASy Swiss-Prot
Match: ACCH3_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 4 OS=Arabidopsis thaliana GN=At1g06650 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 9.587e-21
Identity = 62/192 (32.29%), Postives = 109/192 (56.77%), Query Frame = -1
Query:  212 EISLEYCKRIRQVARELLKGISESLGLEFCYIERAMNLDSGLQILIANLYPPCPQPELAMGMPPHSDHGLLTLLTQNGICGLQLLHNGKWVNVNAVPNSFLVNTGDHIEILSNGKYKSVVHRAVVNNKMTRVSLAIANGPSLDTVVEPS-------KELIERQSEAPAYIGIKYKDFLELQQSNQLDNKSVL 766
            +I +EY K++  + + L + +SE+LGLE  ++   M+   GL +++++ YPPCP+P+L +G   HSD+  LT+L  + I GLQ+   G W +V  V  + ++N GD +++++N K+ S+ HR V+ N+ TR  +++A      T V P+       +EL+  ++  P Y     KD+     +  LD  S L
Sbjct:  179 DIMMEYSKQVMNLGKFLFELLSEALGLEPNHLND-MDCSKGL-LMLSHYYPPCPEPDLTLGTSQHSDNSFLTVLLPDQIEGLQVRREGHWFDVPHVSGALIINIGDLLQLITNDKFISLEHR-VLANRATRARVSVA--CFFTTGVRPNPRMYGPIRELVSEEN-PPKYRETTIKDYATYFNAKGLDGTSAL 364          
BLAST of DY305579 vs. ExPASy Swiss-Prot
Match: G3OX3_ARATH (Gibberellin 3-beta-dioxygenase 3 OS=Arabidopsis thaliana GN=At4g21690 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 6.214e-20
Identity = 66/220 (30.00%), Postives = 107/220 (48.64%), Query Frame = -1
Query:  254 ISLNAWVEKVFFGGDFIKVLVHLEFHS----PNKPVGFSEISLEYCKRIRQVARELLKGISESLGLEFCYI------ERAMNLDSGLQILIANLYPPCPQPELAMGMPPHSDHGLLTLLTQNGICGLQL----LHNGKWVNVNAVPNSFLVNTGDHIEILSNGKYKSVVHRAVVNNKMTRVSLAIANGPSLDTVVEPSKELIERQSEAPAYIGIKYKDFL 871
            + ++ + +K+ +   F  +   L  H+    P+    F  +  EY K +  ++  L+  +  SLGL    +      +     DS    L  N YP CP P LAMG+ PH+D  LLT+L Q  I GL++        +W+ V  +  S +V  GD   I+SNG+++S +HRAVVN    RVS A   GP  +  + P   L   ++  P Y  + ++++L
Sbjct:  117 VRISMFYDKLMWSEGFSVMGSSLRRHATLLWPDDHAEFCNVMEEYQKAMDDLSHRLISMLMGSLGLTHEDLGWLVPDKTGSGTDSIQSFLQLNSYPVCPDPHLAMGLAPHTDSSLLTILYQGNIPGLEIESPQEEGSRWIGVEPIEGSLVVIMGDLSHIISNGQFRSTMHRAVVNKTHHRVSAAYFAGPPKNLQIGP---LTSDKNHPPIYRRLIWEEYL 333          
BLAST of DY305579 vs. ExPASy Swiss-Prot
Match: ACCH2_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 2 OS=Arabidopsis thaliana GN=At1g06640 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.172e-18
Identity = 59/190 (31.05%), Postives = 102/190 (53.68%), Query Frame = -1
Query:  212 EISLEYCKRIRQVARELLKGISESLGLEFCYIERAMNLDSGLQILIANLYPPCPQPELAMGMPPHSDHGLLTLLTQNGICGLQLLHNGKWVNVNAVPNSFLVNTGDHIEILSNGKYKSVVHRAVVNNKMTRVSLAIA-----NGPSLDTVVEPSKELIERQSEAPAYIGIKYKDFLELQQSNQLDNKSVL 766
            ++ +EY K++  +   L + +SE+LGL   ++ + M    GL++L  + +PPCP+P+L  G   HSD   LT+L  + I GLQ+   G W +V  VP + ++N GD +++++N K+ S+ HR V+ N+ TR  +++A     +      V  P KEL+  ++  P Y     +D+        L   S L
Sbjct:  179 DVMMEYSKQVMILGEFLFELLSEALGLNPNHL-KDMECLKGLRML-CHYFPPCPEPDLTFGTSKHSDGSFLTVLLPDNIEGLQVCREGYWFDVPHVPGALIINIGDLLQLITNDKFISLKHR-VLANRATRARVSVACFFHTHVKPNPRVYGPIKELVSEEN-PPKYRETTIRDYATYFNGKGLGGTSAL 364          
BLAST of DY305579 vs. ExPASy Swiss-Prot
Match: GSL_ARATH (Probable 2-oxoacid dependent dioxygenase OS=Arabidopsis thaliana GN=GSL-OH PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.531e-18
Identity = 63/200 (31.50%), Postives = 106/200 (53.00%), Query Frame = -1
Query:  197 EISLEYCKRIRQVARELLKGISESLGLEFCYIERAMNLDSGLQILIANLYPPCPQPELAMGMPPHSDHGLLTLLTQNGICGLQLLHNGKWVNVNAVPNSFLVNTGDHIEILSNGKYKSVVHRAVVN-NKMTRVSLA-----IANGPSLDTVVEPSKELIERQSEAPAYIGIKYKDFLELQQSNQLDNK----SVLDRVRV 766
            EI LEY K + ++A  + + +SE+LGL   +++  M+   GL +L  + +PPCP+P    G   H+D   LT+L  +   GLQ+L++G W++V   P + + N GD ++++SN K+ S+ HR + N  +  R+S+A         PS   V  P KEL+   +        KY+D      ++ +  K    S LD +R+
Sbjct:  169 EIMLEYSKEVMKLAELMFEILSEALGLSPNHLKE-MDCAKGLWML-CHCFPPCPEPNRTFGGAQHTDRSFLTILLNDNNGGLQVLYDGYWIDVPPNPEALIFNVGDFLQLISNDKFVSMEHRILANGGEEPRISVACFFVHTFTSPS-SRVYGPIKELLSELNPP------KYRDTTSESSNHYVARKPNGNSSLDHLRI 359          
BLAST of DY305579 vs. ExPASy Swiss-Prot
Match: G2OX1_ARATH (Gibberellin 2-beta-dioxygenase 1 OS=Arabidopsis thaliana GN=GA2OX1 PE=2 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 1.999e-18
Identity = 62/203 (30.54%), Postives = 101/203 (49.75%), Query Frame = -1
Query:  209 PVGFSEISLEYCKRIRQVARELLKGISESLGLE----FCYIERAMNLDSGLQILIANLYPPCPQPEL-------AMGMPPHSDHGLLTLLTQNGICGLQL-LHNGKWVNVNAVPNSFLVNTGDHIEILSNGKYKSVVHRAVVNNKMTRVSLAIANGPSLDTVVEPSKELIERQSEAPAYIGIKYKDFLELQQSNQLDNKSVLD 781
            P  F     EY   +R++  ++L+ I++ LG++       +    N DS   IL  N YPPCP            +G   H+D  ++++L  N   GLQ+ L++G W++V     SF  N GD +++++NG++KSV HR + N K +RVS+    GPSL   + P   LI+ + E        Y++F   +  N   N  + D
Sbjct:  120 PGTFRNALEEYTTSVRKMTFDVLEKITDGLGIKPRNTLSKLVSDQNTDS---ILRLNHYPPCPLSNKKTNGGKNVIGFGEHTDPQIISVLRSNNTSGLQINLNDGSWISVPPDHTSFFFNVGDSLQVMTNGRFKSVRHRVLANCKKSRVSMIYFAGPSLTQRIAPLTCLIDNEDER------LYEEFTWSEYKNSTYNSRLSD 313          
BLAST of DY305579 vs. ExPASy Swiss-Prot
Match: G2OX2_ARATH (Gibberellin 2-beta-dioxygenase 2 OS=Arabidopsis thaliana GN=GA2OX2 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 2.444e-16
Identity = 53/171 (30.99%), Postives = 92/171 (53.80%), Query Frame = -1
Query:  293 PVGFSEISLEYCKRIRQVARELLKGISESLGLE----FCYIERAMNLDSGLQILIANLYPPCPQPELAM---GMPPHSDHGLLTLLTQNGICGLQL-LHNGKWVNVNAVPNSFLVNTGDHIEILSNGKYKSVVHRAVVNNKMTRVSLAIANGPSLDTVVEPSKELIERQSE 781
            P  F E   EY K I++V+ ++L+ ++E LG+E       + R    DS L++   N YP   +    M   G   H+D  ++++L  N   GLQ+ + +G WV V    +SF +N GD +++++NG++KSV HR + + + +R+S+    GP L   + P   L+  Q +
Sbjct:  134 PQIFRESVEEYMKEIKEVSYKVLEMVAEELGIEPRDTLSKMLRDEKSDSCLRL---NHYPAAEEEAEKMVKVGFGEHTDPQIISVLRSNNTAGLQICVKDGSWVAVPPDHSSFFINVGDALQVMTNGRFKSVKHRVLADTRRSRISMIYFGGPPLSQKIAPLPCLVPEQDD 301          
BLAST of DY305579 vs. ExPASy Swiss-Prot
Match: G2OX3_ARATH (Gibberellin 2-beta-dioxygenase 3 OS=Arabidopsis thaliana GN=GA2OX3 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 9.286e-16
Identity = 52/167 (31.14%), Postives = 89/167 (53.29%), Query Frame = -1
Query:  293 PVGFSEISLEYCKRIRQVARELLKGISESLGLEFCY-IERAMNLDSGLQILIANLYPPCPQPELA--MGMPPHSDHGLLTLLTQNGICGLQL-LHNGKWVNVNAVPNSFLVNTGDHIEILSNGKYKSVVHRAVVNNKMTRVSLAIANGPSLDTVVEPSKELIERQSE 781
            P  F E   EY K +++++ + L+ + E L +E    + R + +      L  N YP   +  +   +G   H+D  L++LL  N   GLQ+ + +G WV+V    +SF V  GD +++++NG++KSV HR V N K +R+S+    GP L   + P   L+ +Q +
Sbjct:  130 PAIFREAVEEYIKEMKRMSSKFLEMVEEELKIEPKEKLSRLVKVKESDSCLRMNHYPEKEETPVKEEIGFGEHTDPQLISLLRSNDTEGLQICVKDGTWVDVTPDHSSFFVLVGDTLQVMTNGRFKSVKHRVVTNTKRSRISMIYFAGPPLSEKIAPLSCLVPKQDD 296          
The following BLAST results are available for this feature:
BLAST of DY305579 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
G3O21_WHEAT6.639e-2234.78Gibberellin 3-beta-dioxygenase 2-1 OS=Triticum aes... [more]
GAOX1_ORYSJ4.303e-2136.31Gibberellin 20 oxidase 1 OS=Oryza sativa subsp. ja... [more]
G2OX8_ARATH5.620e-2139.23Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis th... [more]
ACCH3_ARATH9.587e-2132.291-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
G3OX3_ARATH6.214e-2030.00Gibberellin 3-beta-dioxygenase 3 OS=Arabidopsis th... [more]
ACCH2_ARATH1.172e-1831.051-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
GSL_ARATH1.531e-1831.50Probable 2-oxoacid dependent dioxygenase OS=Arabid... [more]
G2OX1_ARATH1.999e-1830.54Gibberellin 2-beta-dioxygenase 1 OS=Arabidopsis th... [more]
G2OX2_ARATH2.444e-1630.99Gibberellin 2-beta-dioxygenase 2 OS=Arabidopsis th... [more]
G2OX3_ARATH9.286e-1631.14Gibberellin 2-beta-dioxygenase 3 OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1CA11RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305579 ID=DY305579; Name=DY305579; organism=Citrus sinensis; type=EST; length=1234bp
GCACACCAATATTTATTAGTTAATTTATTAATTAATTTTTAAAAAAAAAT
TAATTAATGTCAAAAATATTGTTTGAGATATATTTTAAAATATAAAAACC
AAACATACACTTAAATTAAAATATAATATAAAACTAAATTTAAATTTAAA
GCTTCAATGCCCTCACAAATCCACTCATGTATAGGCTATAAATTCAAACC
CTCACACGGTCCAAAACAGATTTATTATCAAGCTGGTTGCTTTGCTGAAG
TTCCAAAAAGTCCTTGTATTTTATTCCAATGTATGCCGGAGCTTCACTTT
GACGTTCTATCAACTCTTTCGATGGTTCAACGACCGTATCAAGAGATGGT
CCGTTCGCAATGGCTAACGATACCCTTGTCATCTTGTTGTTCACGACAGC
TCTATGCACAACACTCTTGTACTTGCCATTACTCAGAATCTCAATGTGAT
CACCAGTGTTAACAAGAAATGAGTTAGGGACAGCATTGACATTGACCCAC
TTTCCATTGTGTAGCAACTGAAGACCACAAATCCCATTCTGTGTGAGGAG
AGTCAATAGGCCATGATCAGAATGAGGAGGCATTCCCATTGCAAGCTCAG
GCTGTGGACACGGTGGGTACAAATTTGCAATCAGGATTTGCAAACCTGAA
TCTAGATTCATGGCCCTCTCGATGTAGCAGAATTCCAATCCCAAACTCTC
TGATATCCCTTTAAGCAACTCCCTTGCAACTTGTCGAATTCTTTTGCAAT
ATTCTAGTGAAATCTCACTGAATCCAACTGGCTTGTTTGGTGAATGGAAC
TCAAGATGAACGAGGACTTTGATAAAATCCCCTCCAAAAAAAACCTTCTC
AACCCAAGCATTTAAACTAATACCACATCTTAATGGGGTCAAAAACATGC
TTTCCCGCAAACTCTCTCTTCCTCTCCCTCCCTAAGGTTTAAAAATCTTT
TGACAAGAAACCCTCGTCCTTTCCCCTAAATTTCCCCGGGCAATTTAAGA
TTTATTATCCGGAAAAAAACCCCCATCTCCCTGCAGGCCTTTACCCAAAA
ATCCGGGAAAAAATTTGGAACCCTTAAAATGGGGGCGTGGAAAAAAATTT
AAAAAAAAAAAAAAAACCAAAAAACCGGGAAATCAAAAACTTTCTCGGGG
GGCAATATTTCCTTAAAAACCCTCCTTCTCTAATACCGTGTTTTTTTTTT
TTTTGTGGGGGGAAATGTGTTTTTTTTTTTGGTG
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